Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001992-TA|BGIBMGA001992-PA|IPR000198|RhoGAP,
IPR008936|Rho GTPase activation protein
(146 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66521-16|CAI70416.1| 245|Caenorhabditis elegans Hypothetical p... 101 2e-22
Z66521-15|CAA91403.1| 444|Caenorhabditis elegans Hypothetical p... 101 2e-22
AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain, ... 71 3e-13
Z49888-4|CAH60776.1| 742|Caenorhabditis elegans Hypothetical pr... 66 9e-12
Z49888-3|CAA90063.2| 759|Caenorhabditis elegans Hypothetical pr... 66 9e-12
Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical pr... 64 3e-11
U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati... 62 1e-10
L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical pr... 62 1e-10
U80955-10|AAN65297.2| 475|Caenorhabditis elegans Hypothetical p... 60 6e-10
U80955-9|AAN65296.1| 863|Caenorhabditis elegans Hypothetical pr... 60 6e-10
U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical pr... 60 6e-10
Z46812-5|CAA86848.2| 546|Caenorhabditis elegans Hypothetical pr... 59 1e-09
Z46812-4|CAA86847.2| 775|Caenorhabditis elegans Hypothetical pr... 59 1e-09
Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical pr... 59 1e-09
Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical pr... 59 1e-09
Z34800-3|CAA84322.2| 722|Caenorhabditis elegans Hypothetical pr... 57 4e-09
Z34800-2|CAA84324.2| 842|Caenorhabditis elegans Hypothetical pr... 57 4e-09
Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical pr... 53 7e-08
Z81568-11|CAB04593.1| 681|Caenorhabditis elegans Hypothetical p... 47 6e-06
AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical ... 45 2e-05
AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical ... 45 2e-05
U28741-7|AAO38645.1| 721|Caenorhabditis elegans Synapse defecti... 39 0.001
U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defecti... 39 0.001
U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defecti... 39 0.001
AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity... 39 0.001
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr... 37 0.005
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr... 36 0.009
U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical pr... 33 0.082
Z81130-4|CAB03414.2| 512|Caenorhabditis elegans Hypothetical pr... 33 0.11
AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical ... 31 0.33
Z81531-7|CAB04320.1| 722|Caenorhabditis elegans Hypothetical pr... 30 0.76
AL021447-4|CAB60285.3| 330|Caenorhabditis elegans Hypothetical ... 27 4.1
AF039051-7|AAB94267.2| 304|Caenorhabditis elegans Serpentine re... 27 4.1
AL032639-5|CAA21629.1| 342|Caenorhabditis elegans Hypothetical ... 27 7.1
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 27 7.1
U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily ass... 26 9.4
U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily ass... 26 9.4
U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily ass... 26 9.4
AF099913-5|AAC68752.1| 305|Caenorhabditis elegans Hypothetical ... 26 9.4
AF024501-1|AAZ91348.1| 590|Caenorhabditis elegans Hypothetical ... 26 9.4
>Z66521-16|CAI70416.1| 245|Caenorhabditis elegans Hypothetical
protein W02B12.8b protein.
Length = 245
Score = 101 bits (243), Expect = 2e-22
Identities = 58/152 (38%), Positives = 86/152 (56%), Gaps = 11/152 (7%)
Query: 3 TVKQLQNSCNQGEPISFRDDPHI----------AAVLLKTFLRDLEEPVLTYDLYEEILK 52
++K+LQ+ N+GE I F +DP A+VLLKTF R L EP+ T LY ++
Sbjct: 93 SIKRLQDRINKGEKIDFENDPEYKDNEYVASLHASVLLKTFFRSLGEPLTTNRLYPKLAA 152
Query: 53 FQSWPNAEKPRNVKILILERLPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPN 112
EK VK + + LP ENY LLK + +FL +V + S +N MT +NL+VVFGPN
Sbjct: 153 LSEVSKTEKSAAVKEFV-KLLPRENYILLKTVIKFLTRVAENSKVNLMTANNLSVVFGPN 211
Query: 113 LAWPPSGQMSLQAIAPINAFTDFTLENQESIF 144
L WP ++ + + +N F + + +S+F
Sbjct: 212 LTWPTDQEVPISQLNNLNNFCYKLIVDYDSVF 243
>Z66521-15|CAA91403.1| 444|Caenorhabditis elegans Hypothetical
protein W02B12.8a protein.
Length = 444
Score = 101 bits (243), Expect = 2e-22
Identities = 58/152 (38%), Positives = 86/152 (56%), Gaps = 11/152 (7%)
Query: 3 TVKQLQNSCNQGEPISFRDDPHI----------AAVLLKTFLRDLEEPVLTYDLYEEILK 52
++K+LQ+ N+GE I F +DP A+VLLKTF R L EP+ T LY ++
Sbjct: 292 SIKRLQDRINKGEKIDFENDPEYKDNEYVASLHASVLLKTFFRSLGEPLTTNRLYPKLAA 351
Query: 53 FQSWPNAEKPRNVKILILERLPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPN 112
EK VK + + LP ENY LLK + +FL +V + S +N MT +NL+VVFGPN
Sbjct: 352 LSEVSKTEKSAAVKEFV-KLLPRENYILLKTVIKFLTRVAENSKVNLMTANNLSVVFGPN 410
Query: 113 LAWPPSGQMSLQAIAPINAFTDFTLENQESIF 144
L WP ++ + + +N F + + +S+F
Sbjct: 411 LTWPTDQEVPISQLNNLNNFCYKLIVDYDSVF 442
>AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 7 protein.
Length = 1887
Score = 71.3 bits (167), Expect = 3e-13
Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 3 TVKQLQNSCNQGEPISFRD-DPHIAAVLLKTFLRDLEEPVLTYDLYEEILKFQSWPN-AE 60
+++++ S + ++ D H+ L+K F R+L EP++ +DLYE L + E
Sbjct: 1594 SIRKVIESTADADSVNLEDIGVHVLTTLVKAFFRELAEPIIIFDLYENFLNVSEVEDMGE 1653
Query: 61 KPRNVKILILERLPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGP 111
+ R + ++I E LP N +L L L +V D+ +NKM C+NLA++FGP
Sbjct: 1654 RVRCLSVMI-ELLPKPNRAVLDRLMYHLARVADQEAVNKMGCNNLALIFGP 1703
>Z49888-4|CAH60776.1| 742|Caenorhabditis elegans Hypothetical
protein F47A4.3b protein.
Length = 742
Score = 66.1 bits (154), Expect = 9e-12
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 22 DPHIAAVLLKTFLRDLEEPVLTYDLYEEILK-FQSWPN-AEKPRNVKILILERLPIENYK 79
D + + LLK + R L P+ TY Y ++++ F+ + +EK +++ LE +P +Y+
Sbjct: 328 DIYSVSSLLKQYFRQLPNPLFTYQAYPKLIEAFEKEDSLSEKVESLRFS-LETMPEAHYR 386
Query: 80 LLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAWPPS--GQMSLQAIAPINAFT---D 134
K+L + L ++ L MT NLA+V+ PNL PP ++ +N T D
Sbjct: 387 TAKFLMEHLTRLCKSKSLTDMTSKNLAIVWSPNLFRPPPTLNGADTHLLSGLNVHTAICD 446
Query: 135 FTLENQESIFI 145
F +EN ES+F+
Sbjct: 447 FFIENSESLFV 457
>Z49888-3|CAA90063.2| 759|Caenorhabditis elegans Hypothetical
protein F47A4.3a protein.
Length = 759
Score = 66.1 bits (154), Expect = 9e-12
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 22 DPHIAAVLLKTFLRDLEEPVLTYDLYEEILK-FQSWPN-AEKPRNVKILILERLPIENYK 79
D + + LLK + R L P+ TY Y ++++ F+ + +EK +++ LE +P +Y+
Sbjct: 345 DIYSVSSLLKQYFRQLPNPLFTYQAYPKLIEAFEKEDSLSEKVESLRFS-LETMPEAHYR 403
Query: 80 LLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAWPPS--GQMSLQAIAPINAFT---D 134
K+L + L ++ L MT NLA+V+ PNL PP ++ +N T D
Sbjct: 404 TAKFLMEHLTRLCKSKSLTDMTSKNLAIVWSPNLFRPPPTLNGADTHLLSGLNVHTAICD 463
Query: 135 FTLENQESIFI 145
F +EN ES+F+
Sbjct: 464 FFIENSESLFV 474
>Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical
protein C38D4.5 protein.
Length = 837
Score = 64.5 bits (150), Expect = 3e-11
Identities = 37/103 (35%), Positives = 52/103 (50%)
Query: 21 DDPHIAAVLLKTFLRDLEEPVLTYDLYEEILKFQSWPNAEKPRNVKILILERLPIENYKL 80
+D H+ LK F R+L +P+ L++E PNA +L RLP EN +
Sbjct: 673 EDIHVLTGALKLFFRELTDPLFPISLHKEYTSAMQMPNATTRFKKFEELLSRLPNENRET 732
Query: 81 LKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAWPPSGQMSL 123
LK L + L +V S N+M NLA+VFGP L G ++L
Sbjct: 733 LKMLLRHLNRVASHSSQNRMQQHNLAIVFGPTLFHNGDGAVNL 775
>U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating
protein protein.
Length = 1439
Score = 62.5 bits (145), Expect = 1e-10
Identities = 34/101 (33%), Positives = 53/101 (52%)
Query: 22 DPHIAAVLLKTFLRDLEEPVLTYDLYEEILKFQSWPNAEKPRNVKILILERLPIENYKLL 81
D ++ + LLK FLR L EP+LT LY + + +L +LP +Y L
Sbjct: 856 DVNVVSSLLKMFLRKLPEPLLTDKLYPFFIDANRISTHHNRLHKLRNLLRKLPRPHYDTL 915
Query: 82 KYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAWPPSGQMS 122
++L L ++ S +NKM C NLA++FGP++ P M+
Sbjct: 916 RFLIVHLSEITKHSDVNKMECRNLALMFGPSIVRPSDDNMA 956
>L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical
protein C04D8.1 protein.
Length = 1317
Score = 62.5 bits (145), Expect = 1e-10
Identities = 34/101 (33%), Positives = 53/101 (52%)
Query: 22 DPHIAAVLLKTFLRDLEEPVLTYDLYEEILKFQSWPNAEKPRNVKILILERLPIENYKLL 81
D ++ + LLK FLR L EP+LT LY + + +L +LP +Y L
Sbjct: 734 DVNVVSSLLKMFLRKLPEPLLTDKLYPFFIDANRISTHHNRLHKLRNLLRKLPRPHYDTL 793
Query: 82 KYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAWPPSGQMS 122
++L L ++ S +NKM C NLA++FGP++ P M+
Sbjct: 794 RFLIVHLSEITKHSDVNKMECRNLALMFGPSIVRPSDDNMA 834
>U80955-10|AAN65297.2| 475|Caenorhabditis elegans Hypothetical
protein T04C9.1c protein.
Length = 475
Score = 60.1 bits (139), Expect = 6e-10
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 30 LKTFLRDLEEPVLTYDLYEEILKFQSWPNAEKPRNVKILILERLPIENYKLLKYLFQFLW 89
+KTFLR+L EP++T++L+ + +A + + +LP ++ ++L+ + + L
Sbjct: 135 VKTFLRNLPEPLMTFELHNVFINAAKMGDATMRIDHIHFYVHQLPAQHLRMLEIVVRHLK 194
Query: 90 KVKDRSCLNKMTCSNLAVVFGPNLAWPPSGQM-SLQAIAPINAFTDFTLENQESIF 144
+V D S N MT SNL V FGP L P + ++ I N + + N + IF
Sbjct: 195 RVADLSNENLMTVSNLGVCFGPTLLRPKEETVAAIMDIKFCNVVVEVLISNYDKIF 250
>U80955-9|AAN65296.1| 863|Caenorhabditis elegans Hypothetical
protein T04C9.1b protein.
Length = 863
Score = 60.1 bits (139), Expect = 6e-10
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 30 LKTFLRDLEEPVLTYDLYEEILKFQSWPNAEKPRNVKILILERLPIENYKLLKYLFQFLW 89
+KTFLR+L EP++T++L+ + +A + + +LP ++ ++L+ + + L
Sbjct: 475 VKTFLRNLPEPLMTFELHNVFINAAKMGDATMRIDHIHFYVHQLPAQHLRMLEIVVRHLK 534
Query: 90 KVKDRSCLNKMTCSNLAVVFGPNLAWPPSGQM-SLQAIAPINAFTDFTLENQESIF 144
+V D S N MT SNL V FGP L P + ++ I N + + N + IF
Sbjct: 535 RVADLSNENLMTVSNLGVCFGPTLLRPKEETVAAIMDIKFCNVVVEVLISNYDKIF 590
>U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical
protein T04C9.1a protein.
Length = 881
Score = 60.1 bits (139), Expect = 6e-10
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 30 LKTFLRDLEEPVLTYDLYEEILKFQSWPNAEKPRNVKILILERLPIENYKLLKYLFQFLW 89
+KTFLR+L EP++T++L+ + +A + + +LP ++ ++L+ + + L
Sbjct: 475 VKTFLRNLPEPLMTFELHNVFINAAKMGDATMRIDHIHFYVHQLPAQHLRMLEIVVRHLK 534
Query: 90 KVKDRSCLNKMTCSNLAVVFGPNLAWPPSGQM-SLQAIAPINAFTDFTLENQESIF 144
+V D S N MT SNL V FGP L P + ++ I N + + N + IF
Sbjct: 535 RVADLSNENLMTVSNLGVCFGPTLLRPKEETVAAIMDIKFCNVVVEVLISNYDKIF 590
>Z46812-5|CAA86848.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 59.3 bits (137), Expect = 1e-09
Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 9/117 (7%)
Query: 8 QNSCNQGEPISFRDDPHIAAVLLKTFLRDLEEPVLTYDLYEEILKF--------QSWPNA 59
+ S + E ++P A ++K +LR L EP+LT++LY++ ++ S N
Sbjct: 231 ERSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELYDDFVRLGTECCSAQASGSNC 290
Query: 60 EKPRNVKILILER-LPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAW 115
E+ R ++ L R LP+ NY+ LK++ L +V +N M+ SNL+ V P+L W
Sbjct: 291 EEERVEQLRQLARKLPVHNYETLKFIMLHLNRVSWFHEVNLMSTSNLSTVIAPSLIW 347
>Z46812-4|CAA86847.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 59.3 bits (137), Expect = 1e-09
Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 9/117 (7%)
Query: 8 QNSCNQGEPISFRDDPHIAAVLLKTFLRDLEEPVLTYDLYEEILKF--------QSWPNA 59
+ S + E ++P A ++K +LR L EP+LT++LY++ ++ S N
Sbjct: 460 ERSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELYDDFVRLGTECCSAQASGSNC 519
Query: 60 EKPRNVKILILER-LPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAW 115
E+ R ++ L R LP+ NY+ LK++ L +V +N M+ SNL+ V P+L W
Sbjct: 520 EEERVEQLRQLARKLPVHNYETLKFIMLHLNRVSWFHEVNLMSTSNLSTVIAPSLIW 576
>Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 59.3 bits (137), Expect = 1e-09
Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 9/117 (7%)
Query: 8 QNSCNQGEPISFRDDPHIAAVLLKTFLRDLEEPVLTYDLYEEILKF--------QSWPNA 59
+ S + E ++P A ++K +LR L EP+LT++LY++ ++ S N
Sbjct: 231 ERSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELYDDFVRLGTECCSAQASGSNC 290
Query: 60 EKPRNVKILILER-LPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAW 115
E+ R ++ L R LP+ NY+ LK++ L +V +N M+ SNL+ V P+L W
Sbjct: 291 EEERVEQLRQLARKLPVHNYETLKFIMLHLNRVSWFHEVNLMSTSNLSTVIAPSLIW 347
>Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 59.3 bits (137), Expect = 1e-09
Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 9/117 (7%)
Query: 8 QNSCNQGEPISFRDDPHIAAVLLKTFLRDLEEPVLTYDLYEEILKF--------QSWPNA 59
+ S + E ++P A ++K +LR L EP+LT++LY++ ++ S N
Sbjct: 460 ERSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELYDDFVRLGTECCSAQASGSNC 519
Query: 60 EKPRNVKILILER-LPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAW 115
E+ R ++ L R LP+ NY+ LK++ L +V +N M+ SNL+ V P+L W
Sbjct: 520 EEERVEQLRQLARKLPVHNYETLKFIMLHLNRVSWFHEVNLMSTSNLSTVIAPSLIW 576
>Z34800-3|CAA84322.2| 722|Caenorhabditis elegans Hypothetical
protein F45H7.2b protein.
Length = 722
Score = 57.2 bits (132), Expect = 4e-09
Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 14 GEPISFRDDPHIAAVLLKTFLRDLEEPVLTYDLYEEILKFQSW-PNAEKPRNVKILILER 72
GE + H A LLK + RDL EP++T + E S P+ E+ ++ IL
Sbjct: 333 GENLLDSTQVHDVADLLKQYFRDLPEPLMTVKMSEVFANICSVVPDVERITALQYAIL-L 391
Query: 73 LPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNL 113
LP EN + LK L FL +V S +N MT NL+V F P+L
Sbjct: 392 LPDENREALKTLLLFLKEVSRNSQVNNMTAQNLSVCFTPSL 432
>Z34800-2|CAA84324.2| 842|Caenorhabditis elegans Hypothetical
protein F45H7.2a protein.
Length = 842
Score = 57.2 bits (132), Expect = 4e-09
Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 14 GEPISFRDDPHIAAVLLKTFLRDLEEPVLTYDLYEEILKFQSW-PNAEKPRNVKILILER 72
GE + H A LLK + RDL EP++T + E S P+ E+ ++ IL
Sbjct: 453 GENLLDSTQVHDVADLLKQYFRDLPEPLMTVKMSEVFANICSVVPDVERITALQYAIL-L 511
Query: 73 LPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNL 113
LP EN + LK L FL +V S +N MT NL+V F P+L
Sbjct: 512 LPDENREALKTLLLFLKEVSRNSQVNNMTAQNLSVCFTPSL 552
>Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical
protein F12F6.5 protein.
Length = 1059
Score = 53.2 bits (122), Expect = 7e-08
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 22 DPHIAAVLLKTFLRDLEEPVLTYDLYEEILKF-QSWPNAEKPRNVKILILERLPIENYKL 80
D + AA +LK + R+L EP+ ++E+ +S E R + L+ +LP+ + L
Sbjct: 593 DANSAAGVLKLYFRELREPIFPIFMFEQFCDCAKSESPTEFVRRARELV-SKLPVSHVLL 651
Query: 81 LKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAWPPSGQ 120
L++LF FL + + + N M NLA+ FGP L P G+
Sbjct: 652 LRFLFAFLSHLCEFADENMMEPHNLAICFGPTLLPIPEGK 691
>Z81568-11|CAB04593.1| 681|Caenorhabditis elegans Hypothetical
protein K08E3.6 protein.
Length = 681
Score = 46.8 bits (106), Expect = 6e-06
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 22 DPHIAAVLLKTFLRDLEEPVLTYDLYEEILKFQSWPNAEKPRNVKIL---ILERLPIENY 78
D + LK FLRDL++P++ +E++ + + + P N ++ ++ LP N
Sbjct: 486 DVEVITDTLKRFLRDLKDPLIPRTSRQELIVAANLYSTD-PDNGRLALNRVICELPQANR 544
Query: 79 KLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAWPPSGQMSLQAIA 127
L YLF KV +S NKM C +A + P + P Q QAIA
Sbjct: 545 DTLAYLFIHWRKVIAQSSRNKMNCEAMARMVAPAVMGHPVKQSQSQAIA 593
>AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical
protein Y53C10A.4 protein.
Length = 908
Score = 45.2 bits (102), Expect = 2e-05
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Query: 3 TVKQLQNSCNQGEPISFRD-DPHIAAVLLKTFLRDLEEPVLTYDLYEEILK-FQSWPNAE 60
T K+L+ ++G F + H+ A +LK +LR + +L YE ++ PN E
Sbjct: 293 TFKELKCELDKGVVPDFHKYNTHVLASILKEYLRSIPGKILLSGNYELWMREIADEPNTE 352
Query: 61 KPRNVKILILERLPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAWPPSGQ 120
K + +L LP + LL + + L K+ + S +KM S+L+V P+ P
Sbjct: 353 KKVSCCRALLSHLPTSHSILLANVLKLLNKISN-SPSSKMNASSLSVCLAPSFLESPDPM 411
Query: 121 MSLQAIAPINAF 132
+ I P+ F
Sbjct: 412 EGGKKIPPLIEF 423
>AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical
protein Y34B4A.8 protein.
Length = 604
Score = 45.2 bits (102), Expect = 2e-05
Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 19 FRDDPHIAAVLLKTFLRDLEEPVLTYDLYEEILKFQSWPNAEKPRNVKILILERLPIENY 78
+ +DPH A LK +LR+L +P+ L + ++ + E+ + L+++ +
Sbjct: 304 YNNDPHAVASTLKAYLRELPDPLTMDSLQSDWVEAINLEGEERFSAID-RCLKKMTRGHR 362
Query: 79 KLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAWPPSGQMSLQAIAPINAFTDFTLE 138
+ L YL +FL ++ + M SNLA+VF P + M+ + T+F +
Sbjct: 363 QNLIYLMKFLCDLEAKREETSMNASNLAIVFAPTMTGMIYDGMNTHGV----KLTEFMIS 418
Query: 139 NQESIF 144
N IF
Sbjct: 419 NGVRIF 424
>U28741-7|AAO38645.1| 721|Caenorhabditis elegans Synapse defective
protein 1, isoformc protein.
Length = 721
Score = 39.1 bits (87), Expect = 0.001
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 22 DPHIAAVLLKTFLRDLEEPVLTYDLYEEILKFQS--WPN-AEKPRNVKILILERLPIENY 78
D ++ A L+K FLR+L EP+++ ++ +L+ S PN + R++ + I++ L +
Sbjct: 556 DTNVIACLIKDFLRELPEPLISPQIHGMLLEAASVALPNDVQTNRHLVLKIIDCLQLSAK 615
Query: 79 KLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNL 113
L + L V S N +T + L+++F P L
Sbjct: 616 NCLLLVLDHLSTVLCSSPHNGLTPTRLSLIFAPLL 650
>U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defective
protein 1, isoformb protein.
Length = 942
Score = 39.1 bits (87), Expect = 0.001
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 22 DPHIAAVLLKTFLRDLEEPVLTYDLYEEILKFQS--WPN-AEKPRNVKILILERLPIENY 78
D ++ A L+K FLR+L EP+++ ++ +L+ S PN + R++ + I++ L +
Sbjct: 754 DTNVIACLIKDFLRELPEPLISPQIHGMLLEAASVALPNDVQTNRHLVLKIIDCLQLSAK 813
Query: 79 KLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNL 113
L + L V S N +T + L+++F P L
Sbjct: 814 NCLLLVLDHLSTVLCSSPHNGLTPTRLSLIFAPLL 848
>U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defective
protein 1, isoforma protein.
Length = 987
Score = 39.1 bits (87), Expect = 0.001
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 22 DPHIAAVLLKTFLRDLEEPVLTYDLYEEILKFQS--WPN-AEKPRNVKILILERLPIENY 78
D ++ A L+K FLR+L EP+++ ++ +L+ S PN + R++ + I++ L +
Sbjct: 822 DTNVIACLIKDFLRELPEPLISPQIHGMLLEAASVALPNDVQTNRHLVLKIIDCLQLSAK 881
Query: 79 KLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNL 113
L + L V S N +T + L+++F P L
Sbjct: 882 NCLLLVLDHLSTVLCSSPHNGLTPTRLSLIFAPLL 916
>AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity
specification proteinSYD-1 protein.
Length = 942
Score = 39.1 bits (87), Expect = 0.001
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 22 DPHIAAVLLKTFLRDLEEPVLTYDLYEEILKFQS--WPN-AEKPRNVKILILERLPIENY 78
D ++ A L+K FLR+L EP+++ ++ +L+ S PN + R++ + I++ L +
Sbjct: 754 DTNVIACLIKDFLRELPEPLISPQIHGMLLEAASVALPNDVQTNRHLVLKIIDCLQLSAK 813
Query: 79 KLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNL 113
L + L V S N +T + L+++F P L
Sbjct: 814 NCLLLVLDHLSTVLCSSPHNGLTPTRLSLIFAPLL 848
>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical protein
H08M01.2b protein.
Length = 1341
Score = 37.1 bits (82), Expect = 0.005
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 11/104 (10%)
Query: 18 SFRDDPHIAAVLLKTFLRDLEEPVL--TYDL-YEEILKFQSWPNAEKPRNVKILILERLP 74
SF H+AA LK+F L E ++ Y L +++I+ + +K ++ L LP
Sbjct: 1210 SFDTPVHVAATALKSFFSCLPESLIPTAYHLRWKQIMMVSD--DIKKIDGIRDA-LAILP 1266
Query: 75 IENYKLLKYLFQFLWKVKDRSCLNK--MTCSNLAVVFGPNLAWP 116
+ N K+L+YL L KV SC K M +NL+ V+ P L P
Sbjct: 1267 VSNQKVLQYLVTHLTKV---SCSPKTVMNSNNLSKVWTPTLFRP 1307
>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical protein
H08M01.2a protein.
Length = 1320
Score = 36.3 bits (80), Expect = 0.009
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 18 SFRDDPHIAAVLLKTFLRDLEEPVL--TYDL-YEEILKFQSWPNAEKPRNVKILILERLP 74
SF H+AA LK+F L E ++ Y L +++I+ + +K ++ L LP
Sbjct: 1210 SFDTPVHVAATALKSFFSCLPESLIPTAYHLRWKQIMMVSD--DIKKIDGIRDA-LAILP 1266
Query: 75 IENYKLLKYLFQFLWKVKDRSCLNK--MTCSNLAVVFGPNL 113
+ N K+L+YL L KV SC K M +NL+ V+ P L
Sbjct: 1267 VSNQKVLQYLVTHLTKV---SCSPKTVMNSNNLSKVWTPTL 1304
>U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical
protein C01F4.2a protein.
Length = 986
Score = 33.1 bits (72), Expect = 0.082
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 10/100 (10%)
Query: 24 HIAAVLLKTFLRDLEEPVLT---YDLYEEILKFQSWPNAEKPRNVKILILERLPIENYKL 80
H A LLK + RDL + +L Y Y K E R + L++ + + L
Sbjct: 586 HDVATLLKEYFRDLPQSLLPGEHYSAYIGAAKLNVDERIEAIRLLFALLVSPILDTLFVL 645
Query: 81 LKYLFQFLWKVKDRS-------CLNKMTCSNLAVVFGPNL 113
LK+L + +DR NKM NLA +F P++
Sbjct: 646 LKFLHEVSCHSQDRHDEDGELLSGNKMDARNLATIFAPSI 685
>Z81130-4|CAB03414.2| 512|Caenorhabditis elegans Hypothetical
protein T23G11.5 protein.
Length = 512
Score = 32.7 bits (71), Expect = 0.11
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 6 QLQNSCNQGEPISFRDDPHIAAVLLKTFLRDLEEPVL 42
+L+ N GE + F D H AA L+K FLR + EPV+
Sbjct: 105 ELERRANCGEKMIFAD-AHDAAGLIKRFLRQIPEPVV 140
>AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical
protein F52C12.4 protein.
Length = 1635
Score = 31.1 bits (67), Expect = 0.33
Identities = 14/62 (22%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 22 DPHIAAVLLKTFLR-DLEEPVLTYDLYEEILKFQSWPNAEKPRNVKILILERLPIENYKL 80
+P +A +++ R LE+ +TY +Y + +WP+ + + +K+ L R+ + +
Sbjct: 1006 EPEMAVKVMRAMQRAGLEQNAVTYGIYHRAVMDATWPSPARQKAIKMWNLLRIVLTGAET 1065
Query: 81 LK 82
L+
Sbjct: 1066 LR 1067
>Z81531-7|CAB04320.1| 722|Caenorhabditis elegans Hypothetical
protein F36D3.8 protein.
Length = 722
Score = 29.9 bits (64), Expect = 0.76
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 4 VKQLQNSCNQGEPISFRDDPHIAAVLLKTFLRDLEEPVLTYDLYE 48
V Q + CN G PI + D+P +A + + L+D++ D YE
Sbjct: 254 VYQTKKDCNLG-PI-YADNPRVAQAMFASILKDIKASATEIDHYE 296
>AL021447-4|CAB60285.3| 330|Caenorhabditis elegans Hypothetical
protein F19B2.8 protein.
Length = 330
Score = 27.5 bits (58), Expect = 4.1
Identities = 9/51 (17%), Positives = 26/51 (50%)
Query: 41 VLTYDLYEEILKFQSWPNAEKPRNVKILILERLPIENYKLLKYLFQFLWKV 91
+L + + KF P+++K R K ++ + + + ++ + ++ + W V
Sbjct: 209 LLYIPIMRHVRKFSYLPSSQKNRPEKYILYQTITVAAFRTISFMVETTWSV 259
>AF039051-7|AAB94267.2| 304|Caenorhabditis elegans Serpentine
receptor, class x protein8 protein.
Length = 304
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 91 VKDRSCLNKMTCSNLAVVFGPNLAWPPSGQMSLQAIAPINAFTDFTLENQE 141
+ DR L++ SNL+V FG + +Q + +N FT TL Q+
Sbjct: 67 IADRYILSEERTSNLSVFFGWVFLVGWFMESLIQPVMAVNRFTVITLNRQD 117
>AL032639-5|CAA21629.1| 342|Caenorhabditis elegans Hypothetical
protein Y38F1A.4 protein.
Length = 342
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 56 WPNAEKPRNVKILILERLPIENYKLLKYLFQFL 88
W A+K +N +I + LPI +++L QFL
Sbjct: 194 WIWAKKQKNFDTIIRQALPIATFQVLIMTIQFL 226
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 26.6 bits (56), Expect = 7.1
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 13 QGEPISFRDDPHIAAVLLKTFLRDLEEPVLTYDLYEEILKFQ 54
+G+ + D+ +A L++ L+ L + + Y YEEI+K Q
Sbjct: 793 KGDKSTLPDNRQLAYFRLQSTLKRLNKDIELYKKYEEIIKDQ 834
>U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform d protein.
Length = 799
Score = 26.2 bits (55), Expect = 9.4
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 2 VTVKQLQNSCNQGEPISFRDDPHIAAVLLKTFLRDLEEPV 41
+ V+Q QN + PI +DDP A F++D +E V
Sbjct: 613 IQVQQQQNQFSYNVPIQVKDDPRNLAT-ADLFVQDAQEYV 651
>U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform a protein.
Length = 1091
Score = 26.2 bits (55), Expect = 9.4
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 2 VTVKQLQNSCNQGEPISFRDDPHIAAVLLKTFLRDLEEPV 41
+ V+Q QN + PI +DDP A F++D +E V
Sbjct: 613 IQVQQQQNQFSYNVPIQVKDDPRNLAT-ADLFVQDAQEYV 651
>U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform b protein.
Length = 1107
Score = 26.2 bits (55), Expect = 9.4
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 2 VTVKQLQNSCNQGEPISFRDDPHIAAVLLKTFLRDLEEPV 41
+ V+Q QN + PI +DDP A F++D +E V
Sbjct: 613 IQVQQQQNQFSYNVPIQVKDDPRNLAT-ADLFVQDAQEYV 651
>AF099913-5|AAC68752.1| 305|Caenorhabditis elegans Hypothetical
protein C29F9.11 protein.
Length = 305
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/45 (26%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 47 YEEILKFQSWPNAEKPRNVKILILERL-PIENYKLLKYLFQFLWK 90
++E+L SW +A++ + +K++ +E + I+ ++ + L Q WK
Sbjct: 150 FDEVLTILSWFDAKELKTIKLICMESMKSIDRFERITQLEQ--WK 192
>AF024501-1|AAZ91348.1| 590|Caenorhabditis elegans Hypothetical
protein F39E9.4 protein.
Length = 590
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 35 RDLEEPVLTYDLYEEILKFQSWPNAEKPRN 64
R E V+ +++E I K SWP A+K N
Sbjct: 32 RHQETEVIQREVFENIRKIGSWPIADKNWN 61
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.138 0.420
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,730,267
Number of Sequences: 27539
Number of extensions: 150191
Number of successful extensions: 424
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 366
Number of HSP's gapped (non-prelim): 41
length of query: 146
length of database: 12,573,161
effective HSP length: 75
effective length of query: 71
effective length of database: 10,507,736
effective search space: 746049256
effective search space used: 746049256
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 55 (26.2 bits)
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