Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001991-TA|BGIBMGA001991-PA|IPR000509|Ribosomal protein
L36E
(119 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR533465-1|CAG38496.1| 105|Homo sapiens RPL36 protein. 135 3e-32
BC091508-1|AAH91508.1| 105|Homo sapiens ribosomal protein L36 p... 135 3e-32
BC004971-1|AAH04971.1| 105|Homo sapiens ribosomal protein L36 p... 135 3e-32
BC003052-1|AAH03052.1| 105|Homo sapiens ribosomal protein L36 p... 135 3e-32
AB061833-1|BAB79471.1| 105|Homo sapiens ribosomal protein L36 p... 135 3e-32
AB046410-1|BAB21256.1| 32|Homo sapiens ribosomal protein L36 p... 64 1e-10
U93871-1|AAB68767.1| 400|Homo sapiens RaP2 interacting protein ... 29 2.8
CR456748-1|CAG33029.1| 405|Homo sapiens RPIP8 protein. 29 2.8
BX537443-1|CAD97685.1| 400|Homo sapiens hypothetical protein pr... 29 2.8
BC051798-1|AAH51798.1| 1426|Homo sapiens TAOK2 protein protein. 29 2.8
BC015204-1|AAH15204.1| 762|Homo sapiens Unknown (protein for IM... 29 2.8
BC006194-1|AAH06194.1| 405|Homo sapiens RaP2 interacting protei... 29 2.8
AL137701-1|CAB70882.1| 1062|Homo sapiens hypothetical protein pr... 29 2.8
AF263313-1|AAG38503.1| 1049|Homo sapiens STE20-like kinase protein. 29 2.8
AF061943-1|AAD45616.1| 1235|Homo sapiens prostate derived STE20-... 29 2.8
AF055026-1|AAC09366.1| 405|Homo sapiens RaP2 interacting protei... 29 2.8
AB209802-1|BAD93039.1| 481|Homo sapiens RaP2 interacting protei... 29 2.8
AB020688-1|BAA74904.2| 1064|Homo sapiens KIAA0881 protein protein. 29 2.8
L34600-1|AAA67038.1| 727|Homo sapiens initiation factor 2 protein. 29 4.9
AF495546-1|AAM70196.1| 727|Homo sapiens translation initiation ... 29 4.9
AF494407-1|AAM14617.1| 727|Homo sapiens mitochondrial translati... 29 4.9
BC008573-1|AAH08573.1| 48|Homo sapiens HIG2 protein protein. 28 6.5
X67309-1|CAA47719.1| 249|Homo sapiens ribosomal protein S6 prot... 28 8.6
U82468-1|AAB53700.1| 542|Homo sapiens tubby related protein 1 T... 28 8.6
M77232-1|AAA60289.1| 249|Homo sapiens ribosomal protein S6 prot... 28 8.6
M20020-1|AAA60288.1| 249|Homo sapiens RPS6 protein. 28 8.6
J03537-1|AAA60287.1| 249|Homo sapiens RPS6 protein. 28 8.6
BC106017-1|AAI06018.1| 867|Homo sapiens SETX protein protein. 28 8.6
BC094826-1|AAH94826.1| 249|Homo sapiens ribosomal protein S6 pr... 28 8.6
BC078166-1|AAH78166.1| 917|Homo sapiens SETX protein protein. 28 8.6
BC071908-1|AAH71908.1| 249|Homo sapiens ribosomal protein S6 pr... 28 8.6
BC071907-1|AAH71907.1| 249|Homo sapiens ribosomal protein S6 pr... 28 8.6
BC032622-1|AAH32622.2| 1030|Homo sapiens SETX protein protein. 28 8.6
BC032600-1|AAH32600.1| 828|Homo sapiens SETX protein protein. 28 8.6
BC013296-1|AAH13296.1| 249|Homo sapiens ribosomal protein S6 pr... 28 8.6
BC009427-1|AAH09427.2| 247|Homo sapiens RPS6 protein protein. 28 8.6
BC000524-1|AAH00524.1| 249|Homo sapiens ribosomal protein S6 pr... 28 8.6
AY362728-1|AAR13367.1| 2677|Homo sapiens ataxia/oculomotor aprax... 28 8.6
AL391834-6|CAM21143.1| 249|Homo sapiens ribosomal protein S6 pr... 28 8.6
AL391834-5|CAM21142.1| 218|Homo sapiens ribosomal protein S6 pr... 28 8.6
AL353701-2|CAM14151.1| 2677|Homo sapiens senataxin protein. 28 8.6
AL159997-5|CAI40857.1| 948|Homo sapiens senataxin protein. 28 8.6
AL159997-2|CAI40854.1| 2677|Homo sapiens senataxin protein. 28 8.6
AK001456-1|BAA91701.1| 828|Homo sapiens protein ( Homo sapiens ... 28 8.6
AF034923-1|AAB97966.1| 542|Homo sapiens tubby like protein 1 pr... 28 8.6
AB062123-1|BAB93455.1| 249|Homo sapiens ribosomal protein S6 pr... 28 8.6
AB014525-1|BAA31600.2| 2663|Homo sapiens KIAA0625 protein protein. 28 8.6
>CR533465-1|CAG38496.1| 105|Homo sapiens RPL36 protein.
Length = 105
Score = 135 bits (327), Expect = 3e-32
Identities = 71/109 (65%), Positives = 83/109 (76%), Gaps = 10/109 (9%)
Query: 1 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 60
MA R+ +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G
Sbjct: 1 MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50
Query: 61 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 109
A YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 51 APYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
>BC091508-1|AAH91508.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 135 bits (327), Expect = 3e-32
Identities = 71/109 (65%), Positives = 83/109 (76%), Gaps = 10/109 (9%)
Query: 1 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 60
MA R+ +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G
Sbjct: 1 MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50
Query: 61 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 109
A YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 51 APYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
>BC004971-1|AAH04971.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 135 bits (327), Expect = 3e-32
Identities = 71/109 (65%), Positives = 83/109 (76%), Gaps = 10/109 (9%)
Query: 1 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 60
MA R+ +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G
Sbjct: 1 MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50
Query: 61 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 109
A YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 51 APYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
>BC003052-1|AAH03052.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 135 bits (327), Expect = 3e-32
Identities = 71/109 (65%), Positives = 83/109 (76%), Gaps = 10/109 (9%)
Query: 1 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 60
MA R+ +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G
Sbjct: 1 MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50
Query: 61 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 109
A YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 51 APYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
>AB061833-1|BAB79471.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 135 bits (327), Expect = 3e-32
Identities = 71/109 (65%), Positives = 83/109 (76%), Gaps = 10/109 (9%)
Query: 1 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 60
MA R+ +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G
Sbjct: 1 MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50
Query: 61 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 109
A YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 51 APYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
>AB046410-1|BAB21256.1| 32|Homo sapiens ribosomal protein L36
protein.
Length = 32
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/32 (90%), Positives = 32/32 (100%)
Query: 71 LKVSKDKRALKFLKRRLGTHIRAKRKREELSN 102
LKVSKDKRALKF+K+R+GTHIRAKRKREELSN
Sbjct: 1 LKVSKDKRALKFIKKRVGTHIRAKRKREELSN 32
>U93871-1|AAB68767.1| 400|Homo sapiens RaP2 interacting protein 8
protein.
Length = 400
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 19 KISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAME 69
+I +KG ++ +R+R ++LK L+ ++ + L E Q EKR +E
Sbjct: 254 RIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQL-EEAAAQNQREKRELE 303
>CR456748-1|CAG33029.1| 405|Homo sapiens RPIP8 protein.
Length = 405
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 19 KISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAME 69
+I +KG ++ +R+R ++LK L+ ++ + L E Q EKR +E
Sbjct: 259 RIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQL-EEAAAQNQREKRELE 308
>BX537443-1|CAD97685.1| 400|Homo sapiens hypothetical protein
protein.
Length = 400
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 19 KISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAME 69
+I +KG ++ +R+R ++LK L+ ++ + L E Q EKR +E
Sbjct: 254 RIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQL-EEAAAQNQREKRELE 303
>BC051798-1|AAH51798.1| 1426|Homo sapiens TAOK2 protein protein.
Length = 1426
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 37 ARLKGLQTKHS-KFVRDLVREVVGH-AQYEKRAMELLKVS-KDKRALKFLKRRLGTHIRA 93
+RL+G + +HS + R+L + G A+ EK A + K+ RA + +R+ HI
Sbjct: 702 SRLRGEREEHSARLQRELEAQRAGFGAEAEKLARRHQAIGEKEARAAQAEERKFQQHILG 761
Query: 94 KRKREELSNVLAQMR 108
++K+E + + AQ R
Sbjct: 762 QQKKELAALLEAQKR 776
>BC015204-1|AAH15204.1| 762|Homo sapiens Unknown (protein for
IMAGE:3878048) protein.
Length = 762
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 37 ARLKGLQTKHS-KFVRDLVREVVGH-AQYEKRAMELLKVS-KDKRALKFLKRRLGTHIRA 93
+RL+G + +HS + R+L + G A+ EK A + K+ RA + +R+ HI
Sbjct: 511 SRLRGEREEHSARLQRELEAQRAGFGAEAEKLARRHQAIGEKEARAAQAEERKFQQHILG 570
Query: 94 KRKREELSNVLAQMR 108
++K+E + + AQ R
Sbjct: 571 QQKKELAALLEAQKR 585
>BC006194-1|AAH06194.1| 405|Homo sapiens RaP2 interacting protein 8
protein.
Length = 405
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 19 KISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAME 69
+I +KG ++ +R+R ++LK L+ ++ + L E Q EKR +E
Sbjct: 259 RIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQL-EEAAAQNQREKRELE 308
>AL137701-1|CAB70882.1| 1062|Homo sapiens hypothetical protein
protein.
Length = 1062
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 37 ARLKGLQTKHS-KFVRDLVREVVGH-AQYEKRAMELLKVS-KDKRALKFLKRRLGTHIRA 93
+RL+G + +HS + R+L + G A+ EK A + K+ RA + +R+ HI
Sbjct: 338 SRLRGEREEHSARLQRELEAQRAGFGAEAEKLARRHQAIGEKEARAAQAEERKFQQHILG 397
Query: 94 KRKREELSNVLAQMR 108
++K+E + + AQ R
Sbjct: 398 QQKKELAALLEAQKR 412
>AF263313-1|AAG38503.1| 1049|Homo sapiens STE20-like kinase protein.
Length = 1049
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 37 ARLKGLQTKHS-KFVRDLVREVVGH-AQYEKRAMELLKVS-KDKRALKFLKRRLGTHIRA 93
+RL+G + +HS + R+L + G A+ EK A + K+ RA + +R+ HI
Sbjct: 511 SRLRGEREEHSARLQRELEAQRAGFGAEAEKLARRHQAIGEKEARAAQAEERKFQQHILG 570
Query: 94 KRKREELSNVLAQMR 108
++K+E + + AQ R
Sbjct: 571 QQKKELAALLEAQKR 585
>AF061943-1|AAD45616.1| 1235|Homo sapiens prostate derived
STE20-like kinase PSK protein.
Length = 1235
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 37 ARLKGLQTKHS-KFVRDLVREVVGH-AQYEKRAMELLKVS-KDKRALKFLKRRLGTHIRA 93
+RL+G + +HS + R+L + G A+ EK A + K+ RA + +R+ HI
Sbjct: 511 SRLRGEREEHSARLQRELEAQRAGFGAEAEKLARRHQAIGEKEARAAQAEERKFQQHILG 570
Query: 94 KRKREELSNVLAQMR 108
++K+E + + AQ R
Sbjct: 571 QQKKELAALLEAQKR 585
>AF055026-1|AAC09366.1| 405|Homo sapiens RaP2 interacting protein 8
protein.
Length = 405
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 19 KISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAME 69
+I +KG ++ +R+R ++LK L+ ++ + L E Q EKR +E
Sbjct: 259 RIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQL-EEAAAQNQREKRELE 308
>AB209802-1|BAD93039.1| 481|Homo sapiens RaP2 interacting protein 8
variant protein.
Length = 481
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 19 KISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAME 69
+I +KG ++ +R+R ++LK L+ ++ + L E Q EKR +E
Sbjct: 294 RIVYAQKGYLEELVRLRESQLKDLEAENRRLQLQL-EEAAAQNQREKRELE 343
>AB020688-1|BAA74904.2| 1064|Homo sapiens KIAA0881 protein protein.
Length = 1064
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 37 ARLKGLQTKHS-KFVRDLVREVVGH-AQYEKRAMELLKVS-KDKRALKFLKRRLGTHIRA 93
+RL+G + +HS + R+L + G A+ EK A + K+ RA + +R+ HI
Sbjct: 526 SRLRGEREEHSARLQRELEAQRAGFGAEAEKLARRHQAIGEKEARAAQAEERKFQQHILG 585
Query: 94 KRKREELSNVLAQMR 108
++K+E + + AQ R
Sbjct: 586 QQKKELAALLEAQKR 600
>L34600-1|AAA67038.1| 727|Homo sapiens initiation factor 2 protein.
Length = 727
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 11/65 (16%)
Query: 45 KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVL 104
K K RE GH ++KR++ L+FL+R+ ++ K KRE SNVL
Sbjct: 468 KEHKEAHQKAREKYGHLLWKKRSI-----------LRFLERKEQIPLKPKEKRERDSNVL 516
Query: 105 AQMRK 109
+ + K
Sbjct: 517 SVIIK 521
>AF495546-1|AAM70196.1| 727|Homo sapiens translation initiation
factor 2 protein.
Length = 727
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 11/65 (16%)
Query: 45 KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVL 104
K K RE GH ++KR++ L+FL+R+ ++ K KRE SNVL
Sbjct: 468 KEHKEAHQKAREKYGHLLWKKRSI-----------LRFLERKEQIPLKPKEKRERDSNVL 516
Query: 105 AQMRK 109
+ + K
Sbjct: 517 SVIIK 521
>AF494407-1|AAM14617.1| 727|Homo sapiens mitochondrial
translation-initiation factor 2 protein.
Length = 727
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 11/65 (16%)
Query: 45 KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVL 104
K K RE GH ++KR++ L+FL+R+ ++ K KRE SNVL
Sbjct: 468 KEHKEAHQKAREKYGHLLWKKRSI-----------LRFLERKEQIPLKPKEKRERDSNVL 516
Query: 105 AQMRK 109
+ + K
Sbjct: 517 SVIIK 521
>BC008573-1|AAH08573.1| 48|Homo sapiens HIG2 protein protein.
Length = 48
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 65 KRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN 102
+R+ + VS+D+ A+ L H++ K+KR+ L N
Sbjct: 8 RRSFAFVAVSRDRTAVPSLGHSARLHLKKKKKRKSLFN 45
>X67309-1|CAA47719.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 61 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 101
A+Y K + +K +K+KR + KRR + +RA + E S
Sbjct: 207 AEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESS 247
>U82468-1|AAB53700.1| 542|Homo sapiens tubby related protein 1
TULP1 protein.
Length = 542
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 14 GHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRD 52
G K K AGR+G + PA+ + QT +++F+RD
Sbjct: 56 GSKPRKPGAGRRGRPREEPSPDPAQARAPQTVYARFLRD 94
>M77232-1|AAA60289.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 61 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 101
A+Y K + +K +K+KR + KRR + +RA + E S
Sbjct: 207 AEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESS 247
>M20020-1|AAA60288.1| 249|Homo sapiens RPS6 protein.
Length = 249
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 61 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 101
A+Y K + +K +K+KR + KRR + +RA + E S
Sbjct: 207 AEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESS 247
>J03537-1|AAA60287.1| 249|Homo sapiens RPS6 protein.
Length = 249
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 61 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 101
A+Y K + +K +K+KR + KRR + +RA + E S
Sbjct: 207 AEYAKLLAKRMKQAKEKRQEQIAKRRRLSSLRASTSKSESS 247
>BC106017-1|AAI06018.1| 867|Homo sapiens SETX protein protein.
Length = 867
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 69 ELLKVSKDKRALKFLKRRLGTHIRAKRKREE 99
E+LK S D + +K+ L +H++A KR+E
Sbjct: 245 EVLKFSLDSQVNHRMKKELPSHVQAMHKRKE 275
>BC094826-1|AAH94826.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 61 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 101
A+Y K + +K +K+KR + KRR + +RA + E S
Sbjct: 207 AEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESS 247
>BC078166-1|AAH78166.1| 917|Homo sapiens SETX protein protein.
Length = 917
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 69 ELLKVSKDKRALKFLKRRLGTHIRAKRKREE 99
E+LK S D + +K+ L +H++A KR+E
Sbjct: 295 EVLKFSLDSQVNHRMKKELPSHVQAMHKRKE 325
>BC071908-1|AAH71908.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 61 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 101
A+Y K + +K +K+KR + KRR + +RA + E S
Sbjct: 207 AEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESS 247
>BC071907-1|AAH71907.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 61 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 101
A+Y K + +K +K+KR + KRR + +RA + E S
Sbjct: 207 AEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESS 247
>BC032622-1|AAH32622.2| 1030|Homo sapiens SETX protein protein.
Length = 1030
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 69 ELLKVSKDKRALKFLKRRLGTHIRAKRKREE 99
E+LK S D + +K+ L +H++A KR+E
Sbjct: 408 EVLKFSLDSQVNHRMKKELPSHVQAMHKRKE 438
>BC032600-1|AAH32600.1| 828|Homo sapiens SETX protein protein.
Length = 828
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 69 ELLKVSKDKRALKFLKRRLGTHIRAKRKREE 99
E+LK S D + +K+ L +H++A KR+E
Sbjct: 206 EVLKFSLDSQVNHRMKKELPSHVQAMHKRKE 236
>BC013296-1|AAH13296.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 61 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 101
A+Y K + +K +K+KR + KRR + +RA + E S
Sbjct: 207 AEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESS 247
>BC009427-1|AAH09427.2| 247|Homo sapiens RPS6 protein protein.
Length = 247
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 61 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 101
A+Y K + +K +K+KR + KRR + +RA + E S
Sbjct: 205 AEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESS 245
>BC000524-1|AAH00524.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 61 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 101
A+Y K + +K +K+KR + KRR + +RA + E S
Sbjct: 207 AEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESS 247
>AY362728-1|AAR13367.1| 2677|Homo sapiens ataxia/oculomotor apraxia
protein 2 protein.
Length = 2677
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 69 ELLKVSKDKRALKFLKRRLGTHIRAKRKREE 99
E+LK S D + +K+ L +H++A KR+E
Sbjct: 2055 EVLKFSLDSQVNHRMKKELPSHVQAMHKRKE 2085
>AL391834-6|CAM21143.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 61 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 101
A+Y K + +K +K+KR + KRR + +RA + E S
Sbjct: 207 AEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESS 247
>AL391834-5|CAM21142.1| 218|Homo sapiens ribosomal protein S6
protein.
Length = 218
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 61 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 101
A+Y K + +K +K+KR + KRR + +RA + E S
Sbjct: 176 AEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESS 216
>AL353701-2|CAM14151.1| 2677|Homo sapiens senataxin protein.
Length = 2677
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 69 ELLKVSKDKRALKFLKRRLGTHIRAKRKREE 99
E+LK S D + +K+ L +H++A KR+E
Sbjct: 2055 EVLKFSLDSQVNHRMKKELPSHVQAMHKRKE 2085
>AL159997-5|CAI40857.1| 948|Homo sapiens senataxin protein.
Length = 948
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 69 ELLKVSKDKRALKFLKRRLGTHIRAKRKREE 99
E+LK S D + +K+ L +H++A KR+E
Sbjct: 297 EVLKFSLDSQVNHRMKKELPSHVQAMHKRKE 327
>AL159997-2|CAI40854.1| 2677|Homo sapiens senataxin protein.
Length = 2677
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 69 ELLKVSKDKRALKFLKRRLGTHIRAKRKREE 99
E+LK S D + +K+ L +H++A KR+E
Sbjct: 2055 EVLKFSLDSQVNHRMKKELPSHVQAMHKRKE 2085
>AK001456-1|BAA91701.1| 828|Homo sapiens protein ( Homo sapiens
cDNA FLJ10594 fis, clone NT2RP2004689. ).
Length = 828
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 69 ELLKVSKDKRALKFLKRRLGTHIRAKRKREE 99
E+LK S D + +K+ L +H++A KR+E
Sbjct: 206 EVLKFSLDSQVNHRMKKELPSHVQAMHKRKE 236
>AF034923-1|AAB97966.1| 542|Homo sapiens tubby like protein 1
protein.
Length = 542
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 14 GHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRD 52
G K K AGR+G + PA+ + QT +++F+RD
Sbjct: 56 GSKPRKPGAGRRGRPREEPSPDPAQARAPQTVYARFLRD 94
>AB062123-1|BAB93455.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 61 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 101
A+Y K + +K +K+KR + KRR + +RA + E S
Sbjct: 207 AEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESS 247
>AB014525-1|BAA31600.2| 2663|Homo sapiens KIAA0625 protein protein.
Length = 2663
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 69 ELLKVSKDKRALKFLKRRLGTHIRAKRKREE 99
E+LK S D + +K+ L +H++A KR+E
Sbjct: 2041 EVLKFSLDSQVNHRMKKELPSHVQAMHKRKE 2071
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.323 0.135 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,751,665
Number of Sequences: 224733
Number of extensions: 345257
Number of successful extensions: 1325
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1272
Number of HSP's gapped (non-prelim): 57
length of query: 119
length of database: 73,234,838
effective HSP length: 81
effective length of query: 38
effective length of database: 55,031,465
effective search space: 2091195670
effective search space used: 2091195670
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 59 (27.9 bits)
- SilkBase 1999-2023 -