GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001991-TA|BGIBMGA001991-PA|IPR000509|Ribosomal protein
L36E
         (119 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-6|CAD29635.1|  152|Anopheles gambiae putative protein p...    24   1.6  
AJ439398-5|CAD28128.1|  152|Anopheles gambiae putative protein p...    24   1.6  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   3.8  
AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding pr...    22   5.0  
AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding pr...    22   5.0  
AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450 pr...    21   8.8  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    21   8.8  

>AJ441131-6|CAD29635.1|  152|Anopheles gambiae putative protein
          protein.
          Length = 152

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 27 ITDKAI-RIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLK 84
          IT+K + R  P R  G   +  +  R +++++  HA Y      +L  + DK   ++ K
Sbjct: 3  ITEKDLYRDTPVRYLGYANEIGEAFRPVIKKIFVHASYAVAISYVLADTADKSKKQYDK 61


>AJ439398-5|CAD28128.1|  152|Anopheles gambiae putative protein
          protein.
          Length = 152

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 27 ITDKAI-RIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLK 84
          IT+K + R  P R  G   +  +  R +++++  HA Y      +L  + DK   ++ K
Sbjct: 3  ITEKDLYRDTPVRYLGYANEIGEAFRPVIKKIFVHASYAVAISYVLADTADKSKKQYDK 61


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/31 (29%), Positives = 16/31 (51%)

Query: 71  LKVSKDKRALKFLKRRLGTHIRAKRKREELS 101
           +  + D   LK L+   GT +  +RK E ++
Sbjct: 147 MATAPDSHRLKLLREVAGTRVYDERKEESMN 177


>AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding
           protein AgamOBP31 protein.
          Length = 313

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 50  VRDLVREVVGHAQYEKRAMELLK 72
           + +  + V+G  QYEKR  E L+
Sbjct: 90  IMNYFQPVLGDRQYEKRTSECLE 112


>AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 304

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 50  VRDLVREVVGHAQYEKRAMELLK 72
           + +  + V+G  QYEKR  E L+
Sbjct: 90  IMNYFQPVLGDRQYEKRTSECLE 112


>AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 30  KAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELL 71
           +A+ IR   +K +       VRD +R    H++     M+LL
Sbjct: 233 RALGIRVQTMKDVSDFFMNVVRDTIRYREEHSERRDDFMQLL 274


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)

Query: 92  RAKRKREELSNVLAQM 107
           R KRK EEL N + Q+
Sbjct: 133 RTKRKGEELLNTVEQL 148


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.135    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,586
Number of Sequences: 2123
Number of extensions: 2701
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 7
length of query: 119
length of database: 516,269
effective HSP length: 57
effective length of query: 62
effective length of database: 395,258
effective search space: 24505996
effective search space used: 24505996
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 43 (21.4 bits)