BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001991-TA|BGIBMGA001991-PA|IPR000509|Ribosomal protein
L36E
(119 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 26 0.10
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 26 0.10
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 23 1.2
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 1.2
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 1.2
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 1.6
AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex det... 22 1.6
AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex det... 22 1.6
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 1.6
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 1.6
AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex det... 22 1.6
AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex det... 22 1.6
AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex det... 22 1.6
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 1.6
AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex det... 22 1.6
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 1.6
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 1.6
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 1.6
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 1.6
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 1.6
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 1.6
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 1.6
AY569702-1|AAS86655.1| 400|Apis mellifera complementary sex det... 22 1.6
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 1.6
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 1.6
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 1.6
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 1.6
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 1.6
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 1.6
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 1.6
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 1.6
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 1.6
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 1.6
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 1.6
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 1.6
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 2.2
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 2.2
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 26.2 bits (55), Expect = 0.10
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 41 GLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTH-IRAKR 95
GLQ K D + + YEKR+ + V + K + R+G H +R KR
Sbjct: 213 GLQRKKDTTFDDYLDYAINPFDYEKRSTDFQDVESGSESFK--RARMGFHGMRGKR 266
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 26.2 bits (55), Expect = 0.10
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 41 GLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTH-IRAKR 95
GLQ K D + + YEKR+ + V + K + R+G H +R KR
Sbjct: 213 GLQRKKDTTFDDYLDYAINPFDYEKRSTDFQDVESGSESFK--RARMGFHGMRGKR 266
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.6 bits (46), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 83 LKRRLGTHIRAKRKREELSNVLAQMRK 109
L RR G + +REE+ NVL ++ K
Sbjct: 162 LIRRTGEGSKPLFEREEIKNVLTKINK 188
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.6 bits (46), Expect = 1.2
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 37 ARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRK 96
+R G Q S++ R+ + +Y K+ + K+ +K KFL+ R + R R
Sbjct: 219 SRTHGFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKE--KFLEERT-SRKRYSRS 275
Query: 97 REELSNVLAQMRK 109
RE + R+
Sbjct: 276 REREQKLYKNKRE 288
Score = 22.2 bits (45), Expect = 1.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 83 LKRRLGTHIRAKRKREELSNVLAQMRK 109
L RR G + +REE+ NVL ++ K
Sbjct: 162 LIRRTGEGSKPIFEREEIKNVLTKINK 188
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.6 bits (46), Expect = 1.2
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 37 ARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRK 96
+R G Q S++ R+ + +Y K+ + K+ +K KFL+ R + R R
Sbjct: 219 SRTHGFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKE--KFLEERT-SRKRYSRS 275
Query: 97 REELSNVLAQMRK 109
RE + R+
Sbjct: 276 REREQKLYKNKRE 288
Score = 22.2 bits (45), Expect = 1.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 83 LKRRLGTHIRAKRKREELSNVLAQMRK 109
L RR G + +REE+ NVL ++ K
Sbjct: 162 LIRRTGEGSKPIFEREEIKNVLTKINK 188
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 1.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 83 LKRRLGTHIRAKRKREELSNVLAQMRK 109
L RR G + +REE+ NVL ++ K
Sbjct: 151 LIRRTGEGSKPIFEREEIKNVLTKINK 177
>AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 1.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 83 LKRRLGTHIRAKRKREELSNVL 104
LKRR G + +REE+ N+L
Sbjct: 159 LKRRTGEGSKPIFEREEIKNIL 180
>AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 1.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 83 LKRRLGTHIRAKRKREELSNVL 104
LKRR G + +REE+ N+L
Sbjct: 159 LKRRTGEGSKPIFEREEIKNIL 180
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 1.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 83 LKRRLGTHIRAKRKREELSNVLAQMRK 109
L RR G + +REE+ NVL ++ K
Sbjct: 151 LIRRTGEGSKPIFEREEIKNVLTKINK 177
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 1.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 83 LKRRLGTHIRAKRKREELSNVLAQMRK 109
L RR G + +REE+ NVL ++ K
Sbjct: 162 LIRRTGEGSKPIFEREEIKNVLTKINK 188
Score = 20.6 bits (41), Expect = 5.0
Identities = 14/73 (19%), Positives = 31/73 (42%)
Query: 37 ARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRK 96
+R G Q S++ R+ + +Y K+ K+ +K L + + R++ +
Sbjct: 219 SRTHGFQHTSSRYSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERTSCKRYSRSRER 278
Query: 97 REELSNVLAQMRK 109
++L + RK
Sbjct: 279 EQKLYKNEREYRK 291
>AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 1.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 83 LKRRLGTHIRAKRKREELSNVL 104
LKRR G + +REE+ N+L
Sbjct: 159 LKRRTGEGSKPIFEREEIKNIL 180
>AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 1.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 83 LKRRLGTHIRAKRKREELSNVL 104
LKRR G + +REE+ N+L
Sbjct: 159 LKRRTGEGSKPIFEREEIKNIL 180
>AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 1.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 83 LKRRLGTHIRAKRKREELSNVL 104
LKRR G + +REE+ N+L
Sbjct: 159 LKRRTGEGSKPIFEREEIKNIL 180
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 1.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 83 LKRRLGTHIRAKRKREELSNVLAQMRK 109
L RR G + +REE+ NVL ++ K
Sbjct: 162 LIRRTGEGSKPIFEREEIKNVLTKINK 188
>AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 1.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 83 LKRRLGTHIRAKRKREELSNVL 104
LKRR G + +REE+ N+L
Sbjct: 159 LKRRTGEGSKPIFEREEIKNIL 180
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 1.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 83 LKRRLGTHIRAKRKREELSNVLAQMRK 109
L RR G + +REE+ NVL ++ K
Sbjct: 162 LIRRTGEGSKPIFEREEIKNVLTKINK 188
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 1.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 83 LKRRLGTHIRAKRKREELSNVLAQMRK 109
L RR G + +REE+ NVL ++ K
Sbjct: 162 LIRRTGEGSKPIFEREEIKNVLTKINK 188
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 1.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 83 LKRRLGTHIRAKRKREELSNVLAQMRK 109
L RR G + +REE+ NVL ++ K
Sbjct: 162 LIRRTGEGSKPIFEREEIKNVLTKINK 188
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 1.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 83 LKRRLGTHIRAKRKREELSNVLAQMRK 109
L RR G + +REE+ NVL ++ K
Sbjct: 162 LIRRTGEGSKPIFEREEIKNVLTKINK 188
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 1.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 83 LKRRLGTHIRAKRKREELSNVLAQMRK 109
L RR G + +REE+ NVL ++ K
Sbjct: 151 LIRRTGEGSKPIFEREEIKNVLTKINK 177
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.2 bits (45), Expect = 1.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 83 LKRRLGTHIRAKRKREELSNVLAQMRK 109
L RR G + +REE+ NVL ++ K
Sbjct: 162 LIRRTGEGSKPIFEREEIKNVLTKINK 188
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 1.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 85 RRLGTHIRAKRKREELSNVLAQMRK 109
RR G + +REE+ NVL ++ K
Sbjct: 153 RRTGEGSKPLFEREEIKNVLTKINK 177
>AY569702-1|AAS86655.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 1.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 83 LKRRLGTHIRAKRKREELSNVL 104
LKRR G + +REE+ N+L
Sbjct: 159 LKRRTGEGSKPIFEREEIKNIL 180
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 1.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 85 RRLGTHIRAKRKREELSNVLAQMRK 109
RR G + +REE+ NVL ++ K
Sbjct: 164 RRTGEGSKPLFEREEIKNVLTKINK 188
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 1.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 85 RRLGTHIRAKRKREELSNVLAQMRK 109
RR G + +REE+ NVL ++ K
Sbjct: 164 RRTGEGSKPLFEREEIKNVLTKINK 188
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 1.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 85 RRLGTHIRAKRKREELSNVLAQMRK 109
RR G + +REE+ NVL ++ K
Sbjct: 153 RRTGEGSKPLFEREEIKNVLTKINK 177
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 1.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 83 LKRRLGTHIRAKRKREELSNVLAQMRK 109
L RR G + +REE+ NVL ++ K
Sbjct: 162 LIRRTGEGSKPIFEREEIKNVLTKINK 188
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 22.2 bits (45), Expect = 1.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 83 LKRRLGTHIRAKRKREELSNVLAQMRK 109
L RR G + +REE+ NVL ++ K
Sbjct: 162 LIRRTGEGSKPIFEREEIKNVLTKINK 188
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 1.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 83 LKRRLGTHIRAKRKREELSNVLAQMRK 109
L RR G + +REE+ NVL ++ K
Sbjct: 151 LIRRTGEGSKPIFEREEIKNVLTKINK 177
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.2 bits (45), Expect = 1.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 83 LKRRLGTHIRAKRKREELSNVLAQMRK 109
L RR G + +REE+ NVL ++ K
Sbjct: 167 LIRRTGEGSKPIFEREEIKNVLTKINK 193
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.2 bits (45), Expect = 1.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 83 LKRRLGTHIRAKRKREELSNVLAQMRK 109
L RR G + +REE+ NVL ++ K
Sbjct: 162 LIRRTGEGSKPIFEREEIKNVLTKINK 188
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.2 bits (45), Expect = 1.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 83 LKRRLGTHIRAKRKREELSNVLAQMRK 109
L RR G + +REE+ NVL ++ K
Sbjct: 162 LIRRTGEGSKPIFEREEIKNVLTKINK 188
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.2 bits (45), Expect = 1.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 83 LKRRLGTHIRAKRKREELSNVLAQMRK 109
L RR G + +REE+ NVL ++ K
Sbjct: 162 LIRRTGEGSKPIFEREEIKNVLTKINK 188
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 1.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 83 LKRRLGTHIRAKRKREELSNVL 104
LKRR G + +REE+ N+L
Sbjct: 159 LKRRTGEGSKPIFEREEIKNIL 180
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.2 bits (45), Expect = 1.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 83 LKRRLGTHIRAKRKREELSNVLAQMRK 109
L RR G + +REE+ NVL ++ K
Sbjct: 162 LIRRTGEGSKPIFEREEIKNVLTKINK 188
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 2.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 85 RRLGTHIRAKRKREELSNVLAQMRK 109
RR G + +REE+ NVL ++ K
Sbjct: 164 RRTGEGSKPIFEREEIKNVLTKINK 188
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.8 bits (44), Expect = 2.2
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 39 LKGLQT-KHSKFVRDLVREVVGHAQYEKRAME 69
+K ++T K FV V EV+ + + EKR E
Sbjct: 510 VKTMKTIKKGSFVTQYVGEVITNEEAEKRGKE 541
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.323 0.135 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,747
Number of Sequences: 429
Number of extensions: 881
Number of successful extensions: 40
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of query: 119
length of database: 140,377
effective HSP length: 51
effective length of query: 68
effective length of database: 118,498
effective search space: 8057864
effective search space used: 8057864
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.0 bits)
S2: 39 (19.8 bits)
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