Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001990-TA|BGIBMGA001990-PA|IPR001251|Cellular
retinaldehyde-binding/triple function, C-terminal
(358 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 27 0.27
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 26 0.48
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 26 0.48
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 26 0.48
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 26 0.48
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 26 0.48
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 26 0.48
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 26 0.48
EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive pep... 23 4.5
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 23 4.5
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 26.6 bits (56), Expect = 0.27
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 151 LNPDQLLKYLMFTLDKYVEQDYSVVYFHYGLNSKNKPPLSWLWK-AYKAFDRKYKKNLKA 209
L P LLK+ +F LD V+ + +++ + + N + ++ K Y +F+ K LK
Sbjct: 110 LRPKLLLKHNLFLLDNIVKP--IIAFYYKPIKTLNGHEIKFIRKEEYISFESKVFHKLKK 167
Query: 210 L-YLVHPTNVIR 220
+ YLV + ++
Sbjct: 168 MKYLVEVQDEVK 179
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.8 bits (54), Expect = 0.48
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 3 PEHQPKLNPVRAFQVLHGCNGETEENYTSLSEYHDYEPSLEF 44
P+ P + V Q NGET+ TS + Y E EF
Sbjct: 198 PQIYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEF 239
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.8 bits (54), Expect = 0.48
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 3 PEHQPKLNPVRAFQVLHGCNGETEENYTSLSEYHDYEPSLEF 44
P+ P + V Q NGET+ TS + Y E EF
Sbjct: 198 PQIYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEF 239
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.8 bits (54), Expect = 0.48
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 3 PEHQPKLNPVRAFQVLHGCNGETEENYTSLSEYHDYEPSLEF 44
P+ P + V Q NGET+ TS + Y E EF
Sbjct: 198 PQIYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEF 239
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 25.8 bits (54), Expect = 0.48
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 3 PEHQPKLNPVRAFQVLHGCNGETEENYTSLSEYHDYEPSLEF 44
P+ P + V Q NGET+ TS + Y E EF
Sbjct: 198 PQIYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEF 239
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 25.8 bits (54), Expect = 0.48
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 3 PEHQPKLNPVRAFQVLHGCNGETEENYTSLSEYHDYEPSLEF 44
P+ P + V Q NGET+ TS + Y E EF
Sbjct: 154 PQIYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEF 195
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 25.8 bits (54), Expect = 0.48
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 3 PEHQPKLNPVRAFQVLHGCNGETEENYTSLSEYHDYEPSLEF 44
P+ P + V Q NGET+ TS + Y E EF
Sbjct: 198 PQIYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEF 239
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 25.8 bits (54), Expect = 0.48
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 3 PEHQPKLNPVRAFQVLHGCNGETEENYTSLSEYHDYEPSLEF 44
P+ P + V Q NGET+ TS + Y E EF
Sbjct: 198 PQIYPWMKRVHLGQSTVNANGETKRQRTSYTRYQTLELEKEF 239
>EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive
peptide receptor 1 protein.
Length = 374
Score = 22.6 bits (46), Expect = 4.5
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 172 YSVVYFHYGLNSKNKPPLSWLWKAYKAFDRKYKKNLKA 209
Y + H+ + PP WL+K K +R+ N ++
Sbjct: 307 YCLFSTHFCRTLGSLPPFKWLFKKKKRRNRESTTNTQS 344
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 22.6 bits (46), Expect = 4.5
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 22 NGETEENYTSLSEYHDYEPSLEF 44
NGET+ TS + Y E EF
Sbjct: 5 NGETKRQRTSYTRYQTLELEKEF 27
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.317 0.134 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,780
Number of Sequences: 317
Number of extensions: 3192
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 10
length of query: 358
length of database: 114,650
effective HSP length: 58
effective length of query: 300
effective length of database: 96,264
effective search space: 28879200
effective search space used: 28879200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)
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