Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001989-TA|BGIBMGA001989-PA|undefined
(353 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064142-1|AAH64142.1| 414|Homo sapiens chromosome 1 open readi... 39 0.030
BC039109-1|AAH39109.1| 418|Homo sapiens C1orf177 protein protein. 39 0.030
AK097520-1|BAC05087.1| 414|Homo sapiens protein ( Homo sapiens ... 39 0.030
Y12059-1|CAA72780.1| 722|Homo sapiens HUNKI protein. 31 6.1
BC035266-1|AAH35266.1| 794|Homo sapiens BRD4 protein protein. 31 6.1
AY166680-1|AAO22237.1| 1846|Homo sapiens BRD4-NUT fusion oncopro... 31 6.1
AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing ... 31 6.1
AC004798-1|AAC27978.1| 731|Homo sapiens R31546_1 protein. 31 6.1
BC036870-1|AAH36870.1| 459|Homo sapiens hypothetical protein MG... 31 8.1
>BC064142-1|AAH64142.1| 414|Homo sapiens chromosome 1 open reading
frame 177 protein.
Length = 414
Score = 38.7 bits (86), Expect = 0.030
Identities = 62/266 (23%), Positives = 93/266 (34%), Gaps = 27/266 (10%)
Query: 9 PFGSSSQRFGKITVHPGLDPSGLYTIRP---------AGCDPCLYSPQPLYKIFEVNKNR 59
PFG S RF V+P +T P + P YS + F K
Sbjct: 28 PFGVQSHRFDISAVYPNWKKFSTFTEAPYSTRYSTQVSHIGPGTYSSKET--CFSKKKLM 85
Query: 60 KVDKDPWRYKSELEDWAKNLGYRNQKVLDLRKWQASLLGPAWHEISE--PQKYEPACKN- 116
K W E + ++ Q ++ ++ + LGP + + + Q E C
Sbjct: 86 KEVDTGWAKAQEATRLTQLPHFQYQAIMKEKRLKEQKLGPCSYNLKDFLEQLREKPCSTR 145
Query: 117 --LSFGRARNKQKQSSV-PGPGTY-YKETPFRAPHGSHSTRPTFEREEPCRFKNST---- 168
LS G R + + PGPG Y K P+ + R E CR N
Sbjct: 146 GLLSSGEVRFRGLTGNYYPGPGNYGEKGNPYTKLEENAWNRSHSEGLM-CRMSNKPHPRP 204
Query: 169 -LNWSLAPNRYNIIDKNAIDQKHKKVVSLRGPYDLFTGKRDSSTIKNHFNTSLKCSAATW 227
L P Y K+ ++ + V RGPYD F+G R H++ K
Sbjct: 205 HQGSGLGPGTYFF--KSDLETYVARSVGTRGPYDTFSGDRSKPLPYGHYSMQKKKPRELM 262
Query: 228 PL-ALKGSLDKYVNSHLGVMNKTNRS 252
+ L+ + N GV +K R+
Sbjct: 263 NFKSFVEELNSHHNKKHGVFSKLPRN 288
>BC039109-1|AAH39109.1| 418|Homo sapiens C1orf177 protein protein.
Length = 418
Score = 38.7 bits (86), Expect = 0.030
Identities = 62/266 (23%), Positives = 93/266 (34%), Gaps = 27/266 (10%)
Query: 9 PFGSSSQRFGKITVHPGLDPSGLYTIRP---------AGCDPCLYSPQPLYKIFEVNKNR 59
PFG S RF V+P +T P + P YS + F K
Sbjct: 28 PFGVQSHRFDISAVYPNWKKFSTFTEAPYSTRYSTQVSHIGPGTYSSKET--CFSKKKLM 85
Query: 60 KVDKDPWRYKSELEDWAKNLGYRNQKVLDLRKWQASLLGPAWHEISE--PQKYEPACKN- 116
K W E + ++ Q ++ ++ + LGP + + + Q E C
Sbjct: 86 KEVDTGWAKAQEATRLTQLPHFQYQAIMKEKRLKEQRLGPGSYNLKDFLEQLREKPCSTR 145
Query: 117 --LSFGRARNKQKQSSV-PGPGTY-YKETPFRAPHGSHSTRPTFEREEPCRFKNST---- 168
LS G R + + PGPG Y K P+ + R E CR N
Sbjct: 146 GLLSSGEVRFRGLTGNYYPGPGNYGEKGNPYTKLEENAWNRSHSEGLM-CRMSNKPHPRP 204
Query: 169 -LNWSLAPNRYNIIDKNAIDQKHKKVVSLRGPYDLFTGKRDSSTIKNHFNTSLKCSAATW 227
L P Y K+ ++ + V RGPYD F+G R H++ K
Sbjct: 205 HQGSGLGPGTYFF--KSDLETYVARSVGTRGPYDTFSGDRSKPLPYGHYSMQKKKPRELM 262
Query: 228 PL-ALKGSLDKYVNSHLGVMNKTNRS 252
+ L+ + N GV +K R+
Sbjct: 263 NFKSFVEELNSHHNKKHGVFSKLPRN 288
>AK097520-1|BAC05087.1| 414|Homo sapiens protein ( Homo sapiens
cDNA FLJ40201 fis, clone TESTI2020265. ).
Length = 414
Score = 38.7 bits (86), Expect = 0.030
Identities = 62/266 (23%), Positives = 93/266 (34%), Gaps = 27/266 (10%)
Query: 9 PFGSSSQRFGKITVHPGLDPSGLYTIRP---------AGCDPCLYSPQPLYKIFEVNKNR 59
PFG S RF V+P +T P + P YS + F K
Sbjct: 28 PFGVQSHRFDISAVYPNWKKFSTFTEAPYSTRYSTQVSHIGPGTYSSKET--CFSKKKLM 85
Query: 60 KVDKDPWRYKSELEDWAKNLGYRNQKVLDLRKWQASLLGPAWHEISE--PQKYEPACKN- 116
K W E + ++ Q ++ ++ + LGP + + + Q E C
Sbjct: 86 KEVDTGWAKAQEATRLTQLPHFQYQAIMKEKRLKEQKLGPCSYNLKDFLEQLREKPCSTR 145
Query: 117 --LSFGRARNKQKQSSV-PGPGTY-YKETPFRAPHGSHSTRPTFEREEPCRFKNST---- 168
LS G R + + PGPG Y K P+ + R E CR N
Sbjct: 146 GLLSSGEVRFRGLTGNYYPGPGNYGEKGNPYTKLEENAWNRSHSEGLM-CRMSNKPHPRP 204
Query: 169 -LNWSLAPNRYNIIDKNAIDQKHKKVVSLRGPYDLFTGKRDSSTIKNHFNTSLKCSAATW 227
L P Y K+ ++ + V RGPYD F+G R H++ K
Sbjct: 205 HQGSGLGPGTYFF--KSDLETYVARSVGTRGPYDTFSGDRSKPLPYGHYSMQKKKPRELM 262
Query: 228 PL-ALKGSLDKYVNSHLGVMNKTNRS 252
+ L+ + N GV +K R+
Sbjct: 263 NFKSFVEELNSHHNKKHGVFSKLPRN 288
>Y12059-1|CAA72780.1| 722|Homo sapiens HUNKI protein.
Length = 722
Score = 31.1 bits (67), Expect = 6.1
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 63 KDPWRYKSELEDWAKNLGY--RNQKVLDLRKWQASLLGPAWHEISEPQKYEPACKN 116
K P Y+SE ED K + Y + Q LD+ K LG H I Q EP+ KN
Sbjct: 594 KPPPTYESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHII---QSREPSLKN 646
>BC035266-1|AAH35266.1| 794|Homo sapiens BRD4 protein protein.
Length = 794
Score = 31.1 bits (67), Expect = 6.1
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 63 KDPWRYKSELEDWAKNLGY--RNQKVLDLRKWQASLLGPAWHEISEPQKYEPACKN 116
K P Y+SE ED K + Y + Q LD+ K LG H I Q EP+ KN
Sbjct: 594 KPPPTYESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHII---QSREPSLKN 646
>AY166680-1|AAO22237.1| 1846|Homo sapiens BRD4-NUT fusion
oncoprotein protein.
Length = 1846
Score = 31.1 bits (67), Expect = 6.1
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 63 KDPWRYKSELEDWAKNLGY--RNQKVLDLRKWQASLLGPAWHEISEPQKYEPACKN 116
K P Y+SE ED K + Y + Q LD+ K LG H I Q EP+ KN
Sbjct: 594 KPPPTYESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHII---QSREPSLKN 646
>AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing 4
protein.
Length = 1362
Score = 31.1 bits (67), Expect = 6.1
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 63 KDPWRYKSELEDWAKNLGY--RNQKVLDLRKWQASLLGPAWHEISEPQKYEPACKN 116
K P Y+SE ED K + Y + Q LD+ K LG H I Q EP+ KN
Sbjct: 594 KPPPTYESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHII---QSREPSLKN 646
>AC004798-1|AAC27978.1| 731|Homo sapiens R31546_1 protein.
Length = 731
Score = 31.1 bits (67), Expect = 6.1
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 63 KDPWRYKSELEDWAKNLGY--RNQKVLDLRKWQASLLGPAWHEISEPQKYEPACKN 116
K P Y+SE ED K + Y + Q LD+ K LG H I Q EP+ KN
Sbjct: 605 KPPPTYESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHII---QSREPSLKN 657
>BC036870-1|AAH36870.1| 459|Homo sapiens hypothetical protein
MGC46496 protein.
Length = 459
Score = 30.7 bits (66), Expect = 8.1
Identities = 38/157 (24%), Positives = 58/157 (36%), Gaps = 13/157 (8%)
Query: 133 GPGTYYKETPFRAPHGSHSTRPTFE---REEPCRFKNSTLNWSLAPNRYNIIDKNAIDQK 189
GPG+Y + PF + S P RE +S P YN+ + I +
Sbjct: 22 GPGSY--QVPFLKQQATGSNAPFLSLTARESTFTIASSIEKAVPGPGHYNVSEAQKISRS 79
Query: 190 HKKVVSLRGPYDLFTGKRDSSTIKNHFNTSLKCSAATWPLALKGSLDK-YVNSHLGVMNK 248
S+ P GK I N + +KC +P A +L Y V N
Sbjct: 80 PTLTRSVDVPSIPSCGKSYGYHI-NDDGSIIKC----FPPACDSTLGPAYYKPQFDVSNA 134
Query: 249 TNRSQPYRGRNALVDIVMSIRRPDDPGPGHYDVLKPK 285
T + + N+ + + PGPG YD+++ K
Sbjct: 135 TLKYKGIHFGNSSGR--QELPKKSGPGPGQYDIVQKK 169
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.318 0.137 0.433
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,053,686
Number of Sequences: 224733
Number of extensions: 2993773
Number of successful extensions: 4771
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 4768
Number of HSP's gapped (non-prelim): 11
length of query: 353
length of database: 73,234,838
effective HSP length: 91
effective length of query: 262
effective length of database: 52,784,135
effective search space: 13829443370
effective search space used: 13829443370
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 66 (30.7 bits)
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