Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001988-TA|BGIBMGA001988-PA|IPR002110|Ankyrin,
IPR005821|Ion transport
(1384 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g48670.2 68416.m05314 XH/XS domain-containing protein / XS zi... 33 1.3
At3g48670.1 68416.m05313 XH/XS domain-containing protein / XS zi... 33 1.3
At1g62940.1 68414.m07107 4-coumarate--CoA ligase family protein ... 33 1.8
At5g05850.1 68418.m00643 leucine-rich repeat family protein cont... 32 2.3
At3g18770.1 68416.m02382 expressed protein 32 2.3
At5g04090.1 68418.m00394 expressed protein 32 3.1
At1g47900.1 68414.m05334 expressed protein 31 4.1
At5g41780.1 68418.m05087 myosin heavy chain-related weak similar... 31 5.4
At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding protei... 31 5.4
At3g10180.1 68416.m01219 kinesin motor protein-related similar t... 31 5.4
At2g28440.1 68415.m03455 proline-rich family protein contains pr... 31 5.4
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 31 5.4
At5g61620.1 68418.m07732 myb family transcription factor contain... 31 7.2
At5g22740.1 68418.m02656 glycosyl transferase family 2 protein s... 31 7.2
At5g47090.1 68418.m05806 expressed protein 30 9.5
At4g32730.2 68417.m05680 myb family transcription factor identic... 30 9.5
At4g32730.1 68417.m05679 myb family transcription factor identic... 30 9.5
At1g56020.1 68414.m06431 expressed protein 30 9.5
>At3g48670.2 68416.m05314 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 647
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 848 ECVEGYFREQEIKLSNS---IEERVRNTTDRVEHITTKMEDLNQKANCQIQSMQSVEFRL 904
E E R+QE+ + N +EE+ ++ + E + K E+LNQ + ++ Q
Sbjct: 255 ELTEEEARKQELLVQNLRQLVEEKKKDMKEIEELCSVKSEELNQLMEEKEKNQQK---HY 311
Query: 905 RKLEDIAEQTMSHLAVI 921
R+L I E+TMSH+ I
Sbjct: 312 RELNAIQERTMSHIQKI 328
>At3g48670.1 68416.m05313 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 647
Score = 33.1 bits (72), Expect = 1.3
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 848 ECVEGYFREQEIKLSNS---IEERVRNTTDRVEHITTKMEDLNQKANCQIQSMQSVEFRL 904
E E R+QE+ + N +EE+ ++ + E + K E+LNQ + ++ Q
Sbjct: 255 ELTEEEARKQELLVQNLRQLVEEKKKDMKEIEELCSVKSEELNQLMEEKEKNQQK---HY 311
Query: 905 RKLEDIAEQTMSHLAVI 921
R+L I E+TMSH+ I
Sbjct: 312 RELNAIQERTMSHIQKI 328
>At1g62940.1 68414.m07107 4-coumarate--CoA ligase family protein /
4-coumaroyl-CoA synthase family protein similar to
gi:112801 from Petroselinum crispum, GB:AAD40664 from
[Solanum tuberosum] (J. Biol. Chem. 266 (13), 8551-8559
(1991)); contains Pfam AMP-binding enzyme domain PF00501
Length = 542
Score = 32.7 bits (71), Expect = 1.8
Identities = 19/51 (37%), Positives = 25/51 (49%)
Query: 282 LELLDYCYRQDDDQAQQLLTCELQNWSGQTCLSLAVTANHRALLAHPCSQI 332
LE D C D+++ Q C L SG T L V HR L+A+ CS +
Sbjct: 164 LEAGDKCGDTDNEEILQTDLCALPFSSGTTGLQKGVMLTHRNLIANLCSTL 214
>At5g05850.1 68418.m00643 leucine-rich repeat family protein contains
Pfam PF00560: Leucine Rich Repeat domains; similar to
(SP:Q9UQ13) Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) (SP:Q9UQ13) {Homo sapiens}
Length = 506
Score = 32.3 bits (70), Expect = 2.3
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 1269 SEEQPQSSSLLTVTDRRLPHQRHSLRRSSAVDSRELPSPLQPLLGDDACCEVLLPVPRQP 1328
+E P++ +L+ RLP + + SS+ D PS P + E++ +P
Sbjct: 3 TELNPKNFPVLSYVLDRLPS--FTAKSSSSSDVEPPPSKSDPSSSSNHSIEIVTQMPHLA 60
Query: 1329 SGD-----TNASSDLSLSHMVSENLPPRP 1352
D TNA++D+S + V L PRP
Sbjct: 61 HPDVLASMTNATADVSQTRSVLRTLGPRP 89
>At3g18770.1 68416.m02382 expressed protein
Length = 625
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 1332 TNASSDLSLSHMVSENLPPRPSIV---LDSSQLPRQRSAEQQQTQPPGPSRPE 1381
T + S +SH S +LPP PS + P + S Q + PP PS P+
Sbjct: 331 TRSDSHALVSHPCSRHLPPHPSDIPTGRRKESYPEEYSPCQDFSPPPSPSAPK 383
>At5g04090.1 68418.m00394 expressed protein
Length = 305
Score = 31.9 bits (69), Expect = 3.1
Identities = 16/89 (17%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 834 LEKEDMERLYDFEEECVEGYFREQEIKLSNSIEERVRNTTDRVEHITTKMEDLNQKANCQ 893
+ +ED++ + + E C++ Y ++E+ +++ E+ + E + K+E+ N++
Sbjct: 9 VSREDIQLVQNLIERCLQLYMNQKEV--VDTLLEQAKIEPGFTELVWQKLEEENREFFKA 66
Query: 894 IQSMQSVEFRLRKLEDIAEQTMSHLAVIH 922
V+ ++ + ++ EQ ++H+ +H
Sbjct: 67 YYLRLMVKHQIMEYNELLEQQINHMRQMH 95
>At1g47900.1 68414.m05334 expressed protein
Length = 1054
Score = 31.5 bits (68), Expect = 4.1
Identities = 24/107 (22%), Positives = 58/107 (54%), Gaps = 11/107 (10%)
Query: 819 VSHKRFQYDNGLKLFLEKEDME-RLYDFE----EECVEGYFREQEIK----LSNSIEERV 869
+S +++ + GL+ ++ D++ + YD + E VE Y E+++K ++ +E+V
Sbjct: 44 ISVEQYTHFTGLEEQIKSYDVQIKGYDVQVKTYENQVESY--EEQVKDFEEQIDAYDEKV 101
Query: 870 RNTTDRVEHITTKMEDLNQKANCQIQSMQSVEFRLRKLEDIAEQTMS 916
++V+ + +EDLN+K + + + + E +++ +AE +S
Sbjct: 102 HEYEEQVQKLNEDVEDLNEKLSVANEEIVTKEALVKQHSKVAEDAVS 148
>At5g41780.1 68418.m05087 myosin heavy chain-related weak similarity
to M protein, serotype 5 precursor (SP:P02977)
{Streptococcus pyogenes} and to Myosin heavy chain,
non-muscle (SP:Q99323) (Zipper protein) (Myosin II)
{Drosophila melanogaster}
Length = 537
Score = 31.1 bits (67), Expect = 5.4
Identities = 22/90 (24%), Positives = 48/90 (53%), Gaps = 12/90 (13%)
Query: 834 LEKEDMER-LYDFEEECVEGYFREQEIKLSNSIEERVRNTTDRVEHITTKMED---LNQK 889
L ED+ER + + ++E V + R+Q ++++ IE + + ++ + TK+E NQK
Sbjct: 110 LRNEDLERQVSNLKQETV--FLRDQNMEVAGDIEGKRNEDREHLKGLMTKLEAALLCNQK 167
Query: 890 ANCQIQ------SMQSVEFRLRKLEDIAEQ 913
+++ + + RL++LE+ E+
Sbjct: 168 RELEMELVKKTNQVSETQMRLKRLEEETEK 197
>At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding
protein-related similar to matrix-localized MAR DNA
binding protein MFP1 GI:1771158 from [Lycopersicon
esculentum]
Length = 726
Score = 31.1 bits (67), Expect = 5.4
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 829 GLKLFLEKEDMERLYDFEEECVEGYFREQEIK--LSNSIEER---VRNTTDRVEHITTKM 883
G +L EK+ E+L D E + E K L + E+ V DR+ ++ ++
Sbjct: 219 GRELSSEKKLCEKLKDQIESLENSLSKAGEDKEALETKLREKLDLVEGLQDRINLLSLEL 278
Query: 884 EDLNQKANCQIQSMQSVEFRLRKLEDIAEQTMSHLA 919
+D +KA S+ E L++L I QT LA
Sbjct: 279 KDSEEKAQRFNASLAKKEAELKELNSIYTQTSRDLA 314
>At3g10180.1 68416.m01219 kinesin motor protein-related similar to
centromere protein E GB:4502781 [Homo sapiens]
Length = 1348
Score = 31.1 bits (67), Expect = 5.4
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 846 EEECVEGYFREQEIKLSNSIEERVRNTTDRVEHITTKMEDLNQ-----KANCQIQS--MQ 898
EE E +E+ + ++ + + + T+++EH TK+E L K ++ S Q
Sbjct: 922 EELAAERGEKEEALCRNDGLGSEITDLTEKLEHSNTKLEHLQNDVTELKTRLEVSSSDQQ 981
Query: 899 SVEFRLRKLEDIAEQTMSHLA 919
+E +++L + E+ HLA
Sbjct: 982 QLETNVKQLLEEKEELAMHLA 1002
>At2g28440.1 68415.m03455 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains similarity to vegetative cell wall protein gp1
[Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420; +
Length = 268
Score = 31.1 bits (67), Expect = 5.4
Identities = 37/123 (30%), Positives = 47/123 (38%), Gaps = 14/123 (11%)
Query: 1262 ISVCVNTSEEQPQSSSLLTVTDRRLPHQRHSLRRSSAVDSR--ELPSPLQPLLGDDACCE 1319
+S + E+ P S S D LP S S E+ SPL P + E
Sbjct: 45 LSPSSSPEEDSPLSPSSSPEEDSPLPPSSSPEEDSPLAPSSSPEVDSPLAP----SSSPE 100
Query: 1320 VLLPVPRQPSGDTNASSDLSLSHMVSENLPPRPSIVLDSSQLPRQRSAEQQQTQPPGPSR 1379
V P P PS A S L S N P P+ SS P+ S + PP P +
Sbjct: 101 VDSPQP--PSSSPEADSPLPPSSSPEANSPQSPA----SS--PKPESLADSPSPPPPPPQ 152
Query: 1380 PET 1382
PE+
Sbjct: 153 PES 155
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 31.1 bits (67), Expect = 5.4
Identities = 25/127 (19%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Query: 817 RNVSHKRFQYDNGLKLFLEKEDMERLYDFEEECVEGYFREQEIKLSNSI---EERVRNTT 873
R+++ +R + N + + +D+ D EE + + L S ++ V
Sbjct: 494 RSLAEERKELTNVSQEYNRLKDLIVSIDLPEEMSQSSLESRLAWLRESFLQGKDEVNALQ 553
Query: 874 DRVEHITTKME-DLNQKANCQIQSMQSVEFRLRKLEDIAEQ-TMSHLAVIHRFMATHPSL 931
+R+E ++ + ++ +K+N + + + + F L+K+E+ AE+ ++ ++ R + T L
Sbjct: 554 NRIESVSMSLSAEMEEKSNIR-KELDDLSFSLKKMEETAERGSLEREEIVRRLVET-SGL 611
Query: 932 VNRGSTD 938
+ G D
Sbjct: 612 MTEGVED 618
>At5g61620.1 68418.m07732 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 317
Score = 30.7 bits (66), Expect = 7.2
Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 7/106 (6%)
Query: 338 WMGGLRTRKNTNLKVILSLLCPLYILRLEF--KSKEELQLMPQTEEEHLENESIEDDRST 395
W G ++ +T ++ Y +RL K K L + E+ E E D ST
Sbjct: 130 WRGIAKSFVSTRTPTQVASHAQKYFIRLNVNDKRKRRASLFDISLEDQKEKERNSQDAST 189
Query: 396 KDP-----TDAEALIGSGECETRVDQNGKVGKVGWEPSYRELPEYH 436
K P T + + G +T + + + + P Y+ +P Y+
Sbjct: 190 KTPPKQPITGIQQPVVQGHTQTEISNRFQNLSMEYMPIYQPIPPYY 235
>At5g22740.1 68418.m02656 glycosyl transferase family 2 protein
similar to beta-(1-3)-glucosyl transferase GB:AAC62210
GI:3687658 from [Bradyrhizobium japonicum], cellulose
synthase from Agrobacterium tumeficiens [gi:710492] and
Agrobacterium radiobacter [gi:710493]; contains Pfam
glycosyl transferase, group 2 family protein domain
PF00535
Length = 534
Score = 30.7 bits (66), Expect = 7.2
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 439 EIKRMRPLRLRKKIYEFFTAP-ITKFWADSIAYILFLLMFTYTVLVKMNPTPSWPEIYSI 497
EI R + +R KK+Y ++ + K A + + + ++ T+LV P W +Y I
Sbjct: 343 EIVRNKKVRFWKKVYVIYSFFFVRKIIAHWVTFCFYCVVLPLTILVPEVKVPIWGSVY-I 401
Query: 498 CYILTFL 504
I+T L
Sbjct: 402 PSIITIL 408
>At5g47090.1 68418.m05806 expressed protein
Length = 310
Score = 30.3 bits (65), Expect = 9.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 366 EFKSKEELQLMPQTEEEHLENESIEDDRSTKDPTDAEA 403
++ E+++ + EEE E E E+D K+PT+A +
Sbjct: 197 DWVGNEKMEESEEEEEEESEEEEEEEDEEAKNPTEASS 234
>At4g32730.2 68417.m05680 myb family transcription factor identical
to PC-MYB1 GI:5678826 from [Arabidopsis thaliana];
Length = 995
Score = 30.3 bits (65), Expect = 9.5
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 390 EDDRSTKDPTDAEALIGSGECETRVDQNGKVGKVGWEPSYRE 431
E R+ DP + + + S ET + GKV + W PS E
Sbjct: 412 EQGRNMVDPQNGKGSLCSQAAETHAHETGKVPALPWHPSSSE 453
>At4g32730.1 68417.m05679 myb family transcription factor identical
to PC-MYB1 GI:5678826 from [Arabidopsis thaliana];
Length = 776
Score = 30.3 bits (65), Expect = 9.5
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 390 EDDRSTKDPTDAEALIGSGECETRVDQNGKVGKVGWEPSYRE 431
E R+ DP + + + S ET + GKV + W PS E
Sbjct: 412 EQGRNMVDPQNGKGSLCSQAAETHAHETGKVPALPWHPSSSE 453
>At1g56020.1 68414.m06431 expressed protein
Length = 398
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 1263 SVCVNTSEEQPQSSSLLTVTDRRLPHQRHSLRRSSAVDSRE---LPSPLQPLLGDDACCE 1319
S CV ++ P+ S T R+ R RRSS+VD ++ LP P++ + C E
Sbjct: 3 SACVKSAGVSPEKFSSYGWTSPRMSLTRDDNRRSSSVDKQQSDPLPEIQDPVVDFEFCLE 62
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.321 0.136 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,028,232
Number of Sequences: 28952
Number of extensions: 1214783
Number of successful extensions: 3250
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 3237
Number of HSP's gapped (non-prelim): 30
length of query: 1384
length of database: 12,070,560
effective HSP length: 90
effective length of query: 1294
effective length of database: 9,464,880
effective search space: 12247554720
effective search space used: 12247554720
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 65 (30.3 bits)
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