GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001987-TA|BGIBMGA001987-PA|undefined
         (230 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069181-1|AAL39326.1| 1131|Drosophila melanogaster GH22805p pro...   246   2e-65
AE013599-2032|AAM68528.1| 1078|Drosophila melanogaster CG34123-P...   246   2e-65
AE013599-2031|AAF58153.2| 1131|Drosophila melanogaster CG34123-P...   246   2e-65
AE013599-2030|ABI31097.1| 1921|Drosophila melanogaster CG34123-P...   246   2e-65
AY069364-1|AAL39509.1|  318|Drosophila melanogaster LD06593p pro...    31   1.8  
AE014134-1588|AAN10684.1|  318|Drosophila melanogaster CG13101-P...    31   1.8  
AE014134-1587|AAF52731.1|  318|Drosophila melanogaster CG13101-P...    31   1.8  

>AY069181-1|AAL39326.1| 1131|Drosophila melanogaster GH22805p
           protein.
          Length = 1131

 Score =  246 bits (603), Expect = 2e-65
 Identities = 114/179 (63%), Positives = 134/179 (74%), Gaps = 2/179 (1%)

Query: 8   RCWCGLSRTAHGA--NIVTANPGEAWVPARHTQAGPTDAYGTVEFQGGPHPTKAQYVRLS 65
           +C CG ++  H     I + +PG+ W+P +HT+  PTDAYGT+EFQGG HPTKAQYVRLS
Sbjct: 37  KCCCGQAQITHQTIPGIESGSPGDLWLPTKHTRPQPTDAYGTIEFQGGAHPTKAQYVRLS 96

Query: 66  HDTRPELIVQLLTREWALDRPKLLITIQGGKANFDLQPXXXXXXXXXXXXXXXTTGAWIF 125
            DTRPEL+VQL T+EW L+ PKLLIT+QGGKANFDLQ                TTGAWIF
Sbjct: 97  FDTRPELLVQLFTKEWNLELPKLLITVQGGKANFDLQAKLKKEIRKGLLKAAKTTGAWIF 156

Query: 126 TGGTNTGVTRQVGDALQLERSQRAGRVVSIGIAPWGIVEGANELIGKGRDVPYHAIASP 184
           TGGTNTGVT+QVGDAL LE  QR GRVVSIGIAPWGIVE  +EL+G  R+VP H+I+SP
Sbjct: 157 TGGTNTGVTKQVGDALLLEGQQRTGRVVSIGIAPWGIVERNHELLGHNREVPCHSISSP 215


>AE013599-2032|AAM68528.1| 1078|Drosophila melanogaster CG34123-PC,
           isoform C protein.
          Length = 1078

 Score =  246 bits (603), Expect = 2e-65
 Identities = 114/179 (63%), Positives = 134/179 (74%), Gaps = 2/179 (1%)

Query: 8   RCWCGLSRTAHGA--NIVTANPGEAWVPARHTQAGPTDAYGTVEFQGGPHPTKAQYVRLS 65
           +C CG ++  H     I + +PG+ W+P +HT+  PTDAYGT+EFQGG HPTKAQYVRLS
Sbjct: 37  KCCCGQAQITHQTIPGIESGSPGDLWLPTKHTRPQPTDAYGTIEFQGGAHPTKAQYVRLS 96

Query: 66  HDTRPELIVQLLTREWALDRPKLLITIQGGKANFDLQPXXXXXXXXXXXXXXXTTGAWIF 125
            DTRPEL+VQL T+EW L+ PKLLIT+QGGKANFDLQ                TTGAWIF
Sbjct: 97  FDTRPELLVQLFTKEWNLELPKLLITVQGGKANFDLQAKLKKEIRKGLLKAAKTTGAWIF 156

Query: 126 TGGTNTGVTRQVGDALQLERSQRAGRVVSIGIAPWGIVEGANELIGKGRDVPYHAIASP 184
           TGGTNTGVT+QVGDAL LE  QR GRVVSIGIAPWGIVE  +EL+G  R+VP H+I+SP
Sbjct: 157 TGGTNTGVTKQVGDALLLEGQQRTGRVVSIGIAPWGIVERNHELLGHNREVPCHSISSP 215


>AE013599-2031|AAF58153.2| 1131|Drosophila melanogaster CG34123-PB,
           isoform B protein.
          Length = 1131

 Score =  246 bits (603), Expect = 2e-65
 Identities = 114/179 (63%), Positives = 134/179 (74%), Gaps = 2/179 (1%)

Query: 8   RCWCGLSRTAHGA--NIVTANPGEAWVPARHTQAGPTDAYGTVEFQGGPHPTKAQYVRLS 65
           +C CG ++  H     I + +PG+ W+P +HT+  PTDAYGT+EFQGG HPTKAQYVRLS
Sbjct: 37  KCCCGQAQITHQTIPGIESGSPGDLWLPTKHTRPQPTDAYGTIEFQGGAHPTKAQYVRLS 96

Query: 66  HDTRPELIVQLLTREWALDRPKLLITIQGGKANFDLQPXXXXXXXXXXXXXXXTTGAWIF 125
            DTRPEL+VQL T+EW L+ PKLLIT+QGGKANFDLQ                TTGAWIF
Sbjct: 97  FDTRPELLVQLFTKEWNLELPKLLITVQGGKANFDLQAKLKKEIRKGLLKAAKTTGAWIF 156

Query: 126 TGGTNTGVTRQVGDALQLERSQRAGRVVSIGIAPWGIVEGANELIGKGRDVPYHAIASP 184
           TGGTNTGVT+QVGDAL LE  QR GRVVSIGIAPWGIVE  +EL+G  R+VP H+I+SP
Sbjct: 157 TGGTNTGVTKQVGDALLLEGQQRTGRVVSIGIAPWGIVERNHELLGHNREVPCHSISSP 215


>AE013599-2030|ABI31097.1| 1921|Drosophila melanogaster CG34123-PD,
           isoform D protein.
          Length = 1921

 Score =  246 bits (603), Expect = 2e-65
 Identities = 114/179 (63%), Positives = 134/179 (74%), Gaps = 2/179 (1%)

Query: 8   RCWCGLSRTAHGA--NIVTANPGEAWVPARHTQAGPTDAYGTVEFQGGPHPTKAQYVRLS 65
           +C CG ++  H     I + +PG+ W+P +HT+  PTDAYGT+EFQGG HPTKAQYVRLS
Sbjct: 37  KCCCGQAQITHQTIPGIESGSPGDLWLPTKHTRPQPTDAYGTIEFQGGAHPTKAQYVRLS 96

Query: 66  HDTRPELIVQLLTREWALDRPKLLITIQGGKANFDLQPXXXXXXXXXXXXXXXTTGAWIF 125
            DTRPEL+VQL T+EW L+ PKLLIT+QGGKANFDLQ                TTGAWIF
Sbjct: 97  FDTRPELLVQLFTKEWNLELPKLLITVQGGKANFDLQAKLKKEIRKGLLKAAKTTGAWIF 156

Query: 126 TGGTNTGVTRQVGDALQLERSQRAGRVVSIGIAPWGIVEGANELIGKGRDVPYHAIASP 184
           TGGTNTGVT+QVGDAL LE  QR GRVVSIGIAPWGIVE  +EL+G  R+VP H+I+SP
Sbjct: 157 TGGTNTGVTKQVGDALLLEGQQRTGRVVSIGIAPWGIVERNHELLGHNREVPCHSISSP 215


>AY069364-1|AAL39509.1|  318|Drosophila melanogaster LD06593p
           protein.
          Length = 318

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 190 RNFAIIVPTKLKYNKHKEQIKQKNGAGLQRTPSQV 224
           RN   ++PT  K N     +  K+G G+Q +PS++
Sbjct: 265 RNANFVLPTSAKSNGQTNGLDDKSGNGIQHSPSRI 299


>AE014134-1588|AAN10684.1|  318|Drosophila melanogaster CG13101-PB,
           isoform B protein.
          Length = 318

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 190 RNFAIIVPTKLKYNKHKEQIKQKNGAGLQRTPSQV 224
           RN   ++PT  K N     +  K+G G+Q +PS++
Sbjct: 265 RNANFVLPTSAKSNGQTNGLDDKSGNGIQHSPSRI 299


>AE014134-1587|AAF52731.1|  318|Drosophila melanogaster CG13101-PA,
           isoform A protein.
          Length = 318

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 190 RNFAIIVPTKLKYNKHKEQIKQKNGAGLQRTPSQV 224
           RN   ++PT  K N     +  K+G G+Q +PS++
Sbjct: 265 RNANFVLPTSAKSNGQTNGLDDKSGNGIQHSPSRI 299


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.319    0.136    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,521,797
Number of Sequences: 52641
Number of extensions: 472893
Number of successful extensions: 832
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 825
Number of HSP's gapped (non-prelim): 7
length of query: 230
length of database: 24,830,863
effective HSP length: 83
effective length of query: 147
effective length of database: 20,461,660
effective search space: 3007864020
effective search space used: 3007864020
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)