GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001986-TA|BGIBMGA001986-PA|undefined
         (182 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9LFI5 Cluster: Putative uncharacterized protein F4P12_...    35   0.97 
UniRef50_Q53653 Cluster: Clumping factor A precursor; n=59; Stap...    35   0.97 
UniRef50_Q7S722 Cluster: Putative uncharacterized protein NCU055...    34   1.7  
UniRef50_UPI0000E4A177 Cluster: PREDICTED: similar to AT motif b...    33   3.9  

>UniRef50_Q9LFI5 Cluster: Putative uncharacterized protein F4P12_20;
           n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
           protein F4P12_20 - Arabidopsis thaliana (Mouse-ear
           cress)
          Length = 553

 Score = 35.1 bits (77), Expect = 0.97
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 45  RVSPSLPK-NEPFETEPRPSDSDKNDGSHNCSDSDASPGCTLSRSLKNDIRS 95
           R  P LPK   PF++  R SD+ KN+ + +CS  ++    + S S K  I S
Sbjct: 294 RAKPVLPKPGVPFKSSSRSSDASKNEMTSSCSSLESCASASSSASHKPSIDS 345


>UniRef50_Q53653 Cluster: Clumping factor A precursor; n=59;
           Staphylococcus aureus|Rep: Clumping factor A precursor -
           Staphylococcus aureus
          Length = 933

 Score = 35.1 bits (77), Expect = 0.97
 Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 1/37 (2%)

Query: 46  VSPSLPKNEPFETEPRPSDSDKNDGSHNCSDSDASPG 82
           V P  P +EP E EP P DSD + GS + SDS++  G
Sbjct: 543 VVPEQP-DEPGEIEPIPEDSDSDPGSDSGSDSNSDSG 578


>UniRef50_Q7S722 Cluster: Putative uncharacterized protein
           NCU05541.1; n=1; Neurospora crassa|Rep: Putative
           uncharacterized protein NCU05541.1 - Neurospora crassa
          Length = 379

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 48  PSLPKNEPFETEPRPSDSDKNDGSHNCSDSDASPGCTLSRSL 89
           P L K +P E+EP+P   D   G+ + S  D +P    S  L
Sbjct: 101 PELEKKQPAESEPKPKQDDNAQGTSSQSPQDPTPSSNPSGDL 142


>UniRef50_UPI0000E4A177 Cluster: PREDICTED: similar to AT motif
            binding factor 1; n=1; Strongylocentrotus purpuratus|Rep:
            PREDICTED: similar to AT motif binding factor 1 -
            Strongylocentrotus purpuratus
          Length = 3296

 Score = 33.1 bits (72), Expect = 3.9
 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 18   SVGSAEHSPKRVPXXXXXXXXXXXXXXRVSPSLPKNEPFETEPRP--SDSDKNDGSHNCS 75
            S GS++HSP  +P                 P+ PK+ P  T P P  + S+    S + S
Sbjct: 2469 SSGSSQHSPTIIPPNLSAVSPDPFTKISPEPTTPKHTPEPTPPTPTRTKSEHKSPSSSSS 2528

Query: 76   DSDASPG 82
             S  S G
Sbjct: 2529 SSKTSQG 2535


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.313    0.134    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,792,524
Number of Sequences: 1657284
Number of extensions: 5466790
Number of successful extensions: 13610
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 13516
Number of HSP's gapped (non-prelim): 96
length of query: 182
length of database: 575,637,011
effective HSP length: 96
effective length of query: 86
effective length of database: 416,537,747
effective search space: 35822246242
effective search space used: 35822246242
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 69 (31.9 bits)