Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001986-TA|BGIBMGA001986-PA|undefined
(182 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036025-1|AAH36025.1| 1070|Homo sapiens protocadherin 8 protein. 31 1.8
AY013873-1|AAK21986.1| 973|Homo sapiens protocadherin ARCADLIN ... 31 1.8
AL139085-5|CAI14111.1| 973|Homo sapiens protocadherin 8 protein. 31 1.8
AL139085-4|CAI14110.1| 1070|Homo sapiens protocadherin 8 protein. 31 1.8
AF061573-1|AAC70009.2| 1070|Homo sapiens protocadherin protein. 31 1.8
Z99756-1|CAI18854.1| 988|Homo sapiens protein ( Human DNA seque... 30 4.1
Z82214-3|CAI21674.1| 988|Homo sapiens protein ( Human DNA seque... 30 4.1
BC127263-1|AAI27264.1| 363|Homo sapiens SCUBE1 protein protein. 30 4.1
BC063705-1|AAH63705.1| 139|Homo sapiens transmembrane protein 9... 29 7.1
AK130820-1|BAC85439.1| 172|Homo sapiens protein ( Homo sapiens ... 29 7.1
U83113-1|AAC63595.1| 763|Homo sapiens INS-1 winged-helix homolo... 29 9.4
U74613-1|AAC51129.1| 748|Homo sapiens forkhead box M1B protein. 29 9.4
U74612-1|AAC51128.1| 801|Homo sapiens forkhead box M1A protein. 29 9.4
DQ022289-1|AAY26401.1| 801|Homo sapiens forkhead box M1 transcr... 29 9.4
BT006986-1|AAP35632.1| 763|Homo sapiens forkhead box M1 protein. 29 9.4
BC101533-1|AAI01534.1| 843|Homo sapiens axin 2 protein. 29 9.4
BC012863-1|AAH12863.1| 763|Homo sapiens forkhead box M1 protein. 29 9.4
BC006529-1|AAH06529.1| 748|Homo sapiens forkhead box M1 protein. 29 9.4
BC006295-1|AAH06295.1| 160|Homo sapiens Unknown (protein for MG... 29 9.4
BC006192-1|AAH06192.1| 748|Homo sapiens forkhead box M1 protein. 29 9.4
AY542306-1|AAT08175.1| 763|Homo sapiens PIG29 protein. 29 9.4
AF078165-1|AAD20976.1| 843|Homo sapiens conductin protein. 29 9.4
>BC036025-1|AAH36025.1| 1070|Homo sapiens protocadherin 8 protein.
Length = 1070
Score = 31.5 bits (68), Expect = 1.8
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 64 DSDKNDGSHNCSDSDASPGCTLSRSLKNDIRSCLGACRWE 103
DS K D N SDSD S G L + L N ++S L AC E
Sbjct: 916 DSGKGDSDFNDSDSDIS-GDALKKDLINHMQSGLWACTAE 954
>AY013873-1|AAK21986.1| 973|Homo sapiens protocadherin ARCADLIN
protein.
Length = 973
Score = 31.5 bits (68), Expect = 1.8
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 64 DSDKNDGSHNCSDSDASPGCTLSRSLKNDIRSCLGACRWE 103
DS K D N SDSD S G L + L N ++S L AC E
Sbjct: 819 DSGKGDSDFNDSDSDIS-GDALKKDLINHMQSGLWACTAE 857
>AL139085-5|CAI14111.1| 973|Homo sapiens protocadherin 8 protein.
Length = 973
Score = 31.5 bits (68), Expect = 1.8
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 64 DSDKNDGSHNCSDSDASPGCTLSRSLKNDIRSCLGACRWE 103
DS K D N SDSD S G L + L N ++S L AC E
Sbjct: 819 DSGKGDSDFNDSDSDIS-GDALKKDLINHMQSGLWACTAE 857
>AL139085-4|CAI14110.1| 1070|Homo sapiens protocadherin 8 protein.
Length = 1070
Score = 31.5 bits (68), Expect = 1.8
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 64 DSDKNDGSHNCSDSDASPGCTLSRSLKNDIRSCLGACRWE 103
DS K D N SDSD S G L + L N ++S L AC E
Sbjct: 916 DSGKGDSDFNDSDSDIS-GDALKKDLINHMQSGLWACTAE 954
>AF061573-1|AAC70009.2| 1070|Homo sapiens protocadherin protein.
Length = 1070
Score = 31.5 bits (68), Expect = 1.8
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 64 DSDKNDGSHNCSDSDASPGCTLSRSLKNDIRSCLGACRWE 103
DS K D N SDSD S G L + L N ++S L AC E
Sbjct: 916 DSGKGDSDFNDSDSDIS-GDALKKDLINHMQSGLWACTAE 954
>Z99756-1|CAI18854.1| 988|Homo sapiens protein ( Human DNA sequence
from clone RP1-100N22 on chromosome 22q13.31-13.33. ).
Length = 988
Score = 30.3 bits (65), Expect = 4.1
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 72 HNCSDSDASP--GCTLSRSLKNDIRSCLGAC 100
H+C D+D P GC +L +D R+C+ C
Sbjct: 215 HSCEDTDTGPTCGCHQKYALHSDGRTCIETC 245
>Z82214-3|CAI21674.1| 988|Homo sapiens protein ( Human DNA sequence
from clone RP3-526I14 on chromosome 22. ).
Length = 988
Score = 30.3 bits (65), Expect = 4.1
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 72 HNCSDSDASP--GCTLSRSLKNDIRSCLGAC 100
H+C D+D P GC +L +D R+C+ C
Sbjct: 215 HSCEDTDTGPTCGCHQKYALHSDGRTCIETC 245
>BC127263-1|AAI27264.1| 363|Homo sapiens SCUBE1 protein protein.
Length = 363
Score = 30.3 bits (65), Expect = 4.1
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 72 HNCSDSDASP--GCTLSRSLKNDIRSCLGAC 100
H+C D+D P GC +L +D R+C+ C
Sbjct: 215 HSCEDTDTGPMCGCHQKYALHSDGRTCIETC 245
>BC063705-1|AAH63705.1| 139|Homo sapiens transmembrane protein 91
protein.
Length = 139
Score = 29.5 bits (63), Expect = 7.1
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 46 VSPSLPKNEPFETEPRPSDSDKNDGSHNCSDSDASPGCTLSRSLKND 92
+SP LP EPRP D + D S + SDSD G LS L +D
Sbjct: 50 LSPPLPSVSAGLGEPRPPDVE--DMSSSDSDSDWDGGSRLSPFLPHD 94
>AK130820-1|BAC85439.1| 172|Homo sapiens protein ( Homo sapiens
cDNA FLJ27310 fis, clone TMS06301. ).
Length = 172
Score = 29.5 bits (63), Expect = 7.1
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 46 VSPSLPKNEPFETEPRPSDSDKNDGSHNCSDSDASPGCTLSRSLKND 92
+SP LP EPRP D + D S + SDSD G LS L +D
Sbjct: 50 LSPPLPSVSAGLGEPRPPDVE--DMSSSDSDSDWDGGSRLSPFLPHD 94
>U83113-1|AAC63595.1| 763|Homo sapiens INS-1 winged-helix homolog
protein.
Length = 763
Score = 29.1 bits (62), Expect = 9.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 48 PSLPKNEPFETEPRPSDSDKNDGSHNCSDSDASP 81
P ++ P E P P+ S K + SH+ DS SP
Sbjct: 476 PIKVESPPLEEWPSPAPSFKEESSHSWEDSSQSP 509
>U74613-1|AAC51129.1| 748|Homo sapiens forkhead box M1B protein.
Length = 748
Score = 29.1 bits (62), Expect = 9.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 48 PSLPKNEPFETEPRPSDSDKNDGSHNCSDSDASP 81
P ++ P E P P+ S K + SH+ DS SP
Sbjct: 461 PIKVESPPLEEWPSPAPSFKEESSHSWEDSSQSP 494
>U74612-1|AAC51128.1| 801|Homo sapiens forkhead box M1A protein.
Length = 801
Score = 29.1 bits (62), Expect = 9.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 48 PSLPKNEPFETEPRPSDSDKNDGSHNCSDSDASP 81
P ++ P E P P+ S K + SH+ DS SP
Sbjct: 514 PIKVESPPLEEWPSPAPSFKEESSHSWEDSSQSP 547
>DQ022289-1|AAY26401.1| 801|Homo sapiens forkhead box M1 transcript
variant 1 protein.
Length = 801
Score = 29.1 bits (62), Expect = 9.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 48 PSLPKNEPFETEPRPSDSDKNDGSHNCSDSDASP 81
P ++ P E P P+ S K + SH+ DS SP
Sbjct: 514 PIKVESPPLEEWPSPAPSFKEESSHSWEDSSQSP 547
>BT006986-1|AAP35632.1| 763|Homo sapiens forkhead box M1 protein.
Length = 763
Score = 29.1 bits (62), Expect = 9.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 48 PSLPKNEPFETEPRPSDSDKNDGSHNCSDSDASP 81
P ++ P E P P+ S K + SH+ DS SP
Sbjct: 476 PIKVESPPLEEWPSPAPSFKEESSHSWEDSSQSP 509
>BC101533-1|AAI01534.1| 843|Homo sapiens axin 2 protein.
Length = 843
Score = 29.1 bits (62), Expect = 9.4
Identities = 13/25 (52%), Positives = 13/25 (52%)
Query: 137 PRPRVPNRGPTLPYCGPGVRPGDVT 161
PRP VP P C PGV G VT
Sbjct: 22 PRPPVPGEEGETPPCQPGVGKGQVT 46
>BC012863-1|AAH12863.1| 763|Homo sapiens forkhead box M1 protein.
Length = 763
Score = 29.1 bits (62), Expect = 9.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 48 PSLPKNEPFETEPRPSDSDKNDGSHNCSDSDASP 81
P ++ P E P P+ S K + SH+ DS SP
Sbjct: 476 PIKVESPPLEEWPSPAPSFKEESSHSWEDSSQSP 509
>BC006529-1|AAH06529.1| 748|Homo sapiens forkhead box M1 protein.
Length = 748
Score = 29.1 bits (62), Expect = 9.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 48 PSLPKNEPFETEPRPSDSDKNDGSHNCSDSDASP 81
P ++ P E P P+ S K + SH+ DS SP
Sbjct: 461 PIKVESPPLEEWPSPAPSFKEESSHSWEDSSQSP 494
>BC006295-1|AAH06295.1| 160|Homo sapiens Unknown (protein for
MGC:10366) protein.
Length = 160
Score = 29.1 bits (62), Expect = 9.4
Identities = 13/25 (52%), Positives = 13/25 (52%)
Query: 137 PRPRVPNRGPTLPYCGPGVRPGDVT 161
PRP VP P C PGV G VT
Sbjct: 22 PRPPVPGEEGETPPCQPGVGKGQVT 46
>BC006192-1|AAH06192.1| 748|Homo sapiens forkhead box M1 protein.
Length = 748
Score = 29.1 bits (62), Expect = 9.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 48 PSLPKNEPFETEPRPSDSDKNDGSHNCSDSDASP 81
P ++ P E P P+ S K + SH+ DS SP
Sbjct: 461 PIKVESPPLEEWPSPAPSFKEESSHSWEDSSQSP 494
>AY542306-1|AAT08175.1| 763|Homo sapiens PIG29 protein.
Length = 763
Score = 29.1 bits (62), Expect = 9.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 48 PSLPKNEPFETEPRPSDSDKNDGSHNCSDSDASP 81
P ++ P E P P+ S K + SH+ DS SP
Sbjct: 476 PIKVESPPLEEWPSPAPSFKEESSHSWEDSSQSP 509
>AF078165-1|AAD20976.1| 843|Homo sapiens conductin protein.
Length = 843
Score = 29.1 bits (62), Expect = 9.4
Identities = 13/25 (52%), Positives = 13/25 (52%)
Query: 137 PRPRVPNRGPTLPYCGPGVRPGDVT 161
PRP VP P C PGV G VT
Sbjct: 22 PRPPVPGEEGETPPCQPGVGKGQVT 46
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.313 0.134 0.421
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,147,904
Number of Sequences: 224733
Number of extensions: 840991
Number of successful extensions: 1850
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1835
Number of HSP's gapped (non-prelim): 22
length of query: 182
length of database: 73,234,838
effective HSP length: 85
effective length of query: 97
effective length of database: 54,132,533
effective search space: 5250855701
effective search space used: 5250855701
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 62 (29.1 bits)
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