GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001986-TA|BGIBMGA001986-PA|undefined
         (182 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138932-1|ABA86538.1| 1387|Drosophila melanogaster CG12105 prot...    29   4.9  
AE014296-300|AAF47521.2| 1509|Drosophila melanogaster CG12105-PA...    28   8.6  

>DQ138932-1|ABA86538.1| 1387|Drosophila melanogaster CG12105
           protein.
          Length = 1387

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 6/63 (9%)

Query: 45  RVSPSLPKNEPFETEPRPSDSD---KNDGSHNCSDSDASPG---CTLSRSLKNDIRSCLG 98
           +V P++ +++   T+ RPSDS+   K           A+P    CT  R+  +  + C+G
Sbjct: 870 KVEPAVEQSDVLITQRRPSDSEAIVKRKKKLKLMGDTAAPSTSTCTSPRAASSTTKDCIG 929

Query: 99  ACR 101
             R
Sbjct: 930 IAR 932


>AE014296-300|AAF47521.2| 1509|Drosophila melanogaster CG12105-PA
            protein.
          Length = 1509

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 6/63 (9%)

Query: 45   RVSPSLPKNEPFETEPRPSDSD---KNDGSHNCSDSDASPG---CTLSRSLKNDIRSCLG 98
            +V P++ +++   T+ RPSDS+   K           A+P    CT  R+  +  + C+G
Sbjct: 972  KVEPAVEQSDVLITQRRPSDSEAIVKRKKKLKLMGDTAAPSTSTCTSPRAASSTTKDCIG 1031

Query: 99   ACR 101
              R
Sbjct: 1032 NSR 1034


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.313    0.134    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,501,177
Number of Sequences: 52641
Number of extensions: 268610
Number of successful extensions: 688
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 688
Number of HSP's gapped (non-prelim): 2
length of query: 182
length of database: 24,830,863
effective HSP length: 81
effective length of query: 101
effective length of database: 20,566,942
effective search space: 2077261142
effective search space used: 2077261142
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 59 (27.9 bits)