GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001985-TA|BGIBMGA001985-PA|IPR002110|Ankyrin
         (664 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    24   2.9  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    24   2.9  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    24   2.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   3.9  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 243 AAERARASVVEILAAR-PEVTRAEAIEAYELLGASFANDKEYYCLRMAYQYLHRAMAMRY 301
           A+ R   ++V IL A    V +   I A + L    AN   +YC  +A  YL+  +AM++
Sbjct: 68  ASARVGYTIVTILGATFVTVLQLHKIFA-KGLNVIEANRLFFYCSGLASGYLYLKLAMKW 126

Query: 302 DPRY 305
            PR+
Sbjct: 127 -PRF 129


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 243 AAERARASVVEILAAR-PEVTRAEAIEAYELLGASFANDKEYYCLRMAYQYLHRAMAMRY 301
           A+ R   ++V IL A    V +   I A + L    AN   +YC  +A  YL+  +AM++
Sbjct: 68  ASARVGYTIVTILGATFVTVLQLHKIFA-KGLNVIEANRLFFYCSGLASGYLYLKLAMKW 126

Query: 302 DPRY 305
            PR+
Sbjct: 127 -PRF 129


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 243 AAERARASVVEILAAR-PEVTRAEAIEAYELLGASFANDKEYYCLRMAYQYLHRAMAMRY 301
           A+ R   ++V IL A    V +   I A + L    AN   +YC  +A  YL+  +AM++
Sbjct: 68  ASARVGYTIVTILGATFVTVLQLHKIFA-KGLNVIEANRLFFYCSGLASGYLYLKLAMKW 126

Query: 302 DPRY 305
            PR+
Sbjct: 127 -PRF 129


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 453 SLVEEYDSNVKTALYLVAVAGRLLEDSGNCERWLSQGTRSAARRAVFAMRGA 504
           S V  +D N     Y++      +   GN ER L  G ++ A   VF +R A
Sbjct: 915 SWVAPFDGNSPITRYMIEYKQSKVSWEGNTERVLVPGDQTEA--GVFTLRPA 964


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.137    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,656
Number of Sequences: 317
Number of extensions: 5858
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 4
length of query: 664
length of database: 114,650
effective HSP length: 61
effective length of query: 603
effective length of database: 95,313
effective search space: 57473739
effective search space used: 57473739
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 46 (22.6 bits)