GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001985-TA|BGIBMGA001985-PA|IPR002110|Ankyrin
         (664 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         23   6.1  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    23   8.0  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               23   8.0  

>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 9/33 (27%), Positives = 17/33 (51%)

Query: 216 HAAVVCSLLDHGAKMLTNENGMTPLQCAAERAR 248
           H  V C +L   +K L+  +    ++C A+R +
Sbjct: 59  HRRVTCDVLSWQSKWLSINHSACAIRCLAQRRK 91


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 7/36 (19%)

Query: 305 YGEMLKRPSTPIPAYDNWKETTTLEEVERLQGDAHG 340
           +G+ +  PS   P Y  WK       VER  G+A G
Sbjct: 197 HGDNMLEPSPKTPWYKGWK-------VERKDGNADG 225


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 15/59 (25%), Positives = 24/59 (40%)

Query: 532 CQFPCARTSRLLLDCGADVDAADMNRRTPLHVALISYQLTSDDREQYNEAFCGVVCELL 590
           C   C  T   +LD  A+VD     R  P  +   + +L +  +   NE  C    +L+
Sbjct: 57  CYLKCFMTKHGILDKNAEVDVQKALRHLPRSMQDSTKKLFNKCKSIQNEDPCEKAYQLV 115


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.137    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,721
Number of Sequences: 429
Number of extensions: 8148
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 3
length of query: 664
length of database: 140,377
effective HSP length: 62
effective length of query: 602
effective length of database: 113,779
effective search space: 68494958
effective search space used: 68494958
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 47 (23.0 bits)