Silkworm BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001984-TA|BGIBMGA001984-PA|IPR001130|TatD-related
deoxyribonuclease, IPR012278|Mg-dependent DNase, TatD
         (251 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    28   0.30 
AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative apyrase/n...    25   2.1  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   2.8  
AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismuta...    24   4.9  
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    23   6.4  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    23   6.4  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    23   6.4  
AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5' nucleo...    23   8.5  

>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 27.9 bits (59), Expect = 0.30
 Identities = 9/24 (37%), Positives = 18/24 (75%)

Query: 139 DLIEIISRNRDKIIGGVVHSFDGS 162
           +++ ++ RNRD +IGG V+ + G+
Sbjct: 108 EIVSMLPRNRDTVIGGYVNVWSGA 131


>AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 568

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 15/59 (25%), Positives = 27/59 (45%)

Query: 101 ERFHFCEKEVQLKFFEKQLPLSLEYNLPLFLHCRAAADDLIEIISRNRDKIIGGVVHSF 159
           ER  F ++  QL+    +L      ++ +  HC    D +I     + D ++GG  H+F
Sbjct: 208 ERLRFLDEVEQLRMEIGRLKEEGVQHIVVLSHCGLEIDRIIARELPDVDVVVGGHSHTF 266


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 6/110 (5%)

Query: 5   EYNGSRKHDPDLDVVLERAWTSGINKIIVTGGSLEDSKKAIELSRTDSKLFTTVGCHPTR 64
           E +G RK   D  ++L +      +++     +L+D+KK +  ++ +  +  T   H   
Sbjct: 241 ELDGQRKSSGDKQLLLTQEIQKAQDRLKNAQKALKDAKKDVVTAKDEKSVLATE--HQQL 298

Query: 65  CSEFLSNPDDYLQGLRDLISG-NKDKVVAIGECGLDYERFHFCEKEVQLK 113
             E  +  D  +  L D + G NK K  A  E  L+  +    EKE +L+
Sbjct: 299 LRE-KTKLDLTISDLSDEVQGDNKSKERA--EQELERLKITIAEKEKELE 345


>AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismutase
           1 protein.
          Length = 206

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 9/19 (47%), Positives = 15/19 (78%)

Query: 162 SEQDLQKILELGLSIGING 180
           ++QD+ KI++LG +I  NG
Sbjct: 82  AKQDVSKIIQLGNAIKFNG 100


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 35  GGSLEDSKKAIELSRTDSKLFTTVGCHPTRCSEF 68
           G  ++    A++   T   L  TVG HPT   EF
Sbjct: 476 GEVIQGFAAALKCGLTMQVLRNTVGIHPTVAEEF 509


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 35  GGSLEDSKKAIELSRTDSKLFTTVGCHPTRCSEF 68
           G  ++    A++   T   L  TVG HPT   EF
Sbjct: 452 GEVIQGFAAALKCGLTMQVLRNTVGIHPTVAEEF 485


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 35  GGSLEDSKKAIELSRTDSKLFTTVGCHPTRCSEF 68
           G  ++    A++   T   L  TVG HPT   EF
Sbjct: 449 GEVIQGFAAALKCGLTMQVLRNTVGIHPTVAEEF 482


>AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 568

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 15/59 (25%), Positives = 26/59 (44%)

Query: 101 ERFHFCEKEVQLKFFEKQLPLSLEYNLPLFLHCRAAADDLIEIISRNRDKIIGGVVHSF 159
           ER  F  +  QL+    +L      ++ +  HC    D +I     + D ++GG  H+F
Sbjct: 208 ERLRFLGEVEQLRMEIGRLKEEGIQHIVVLSHCGLEIDRIIARELPDVDVVVGGHSHTF 266


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.138    0.413 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 265,580
Number of Sequences: 2123
Number of extensions: 10663
Number of successful extensions: 74
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 67
Number of HSP's gapped (non-prelim): 8
length of query: 251
length of database: 516,269
effective HSP length: 62
effective length of query: 189
effective length of database: 384,643
effective search space: 72697527
effective search space used: 72697527
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)