GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001983-TA|BGIBMGA001983-PA|IPR000215|Proteinase
inhibitor I4, serpin
         (377 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   8.3  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   8.3  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   8.3  

>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 13/47 (27%), Positives = 21/47 (44%)

Query: 8   RTRLGDAIDKTSLKILKESYNLADDKNVIASPLGVMLLLSLYESGAG 54
           +  L  A+D     +L   +NL   K+ IA P    ++L L  +  G
Sbjct: 619 KINLKHALDLDRQGLLHRQFNLPPAKDTIAVPNNGYVVLRLRANNPG 665


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)

Query: 262 LSPAGRDIELEIPKFEIR-SGLDLNIILPKVG 292
           +SP G  + L +PK+E   S +D    LP  G
Sbjct: 137 MSPPGNVLNLTMPKYEPNPSIIDPGPALPPAG 168


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)

Query: 262 LSPAGRDIELEIPKFEIR-SGLDLNIILPKVG 292
           +SP G  + L +PK+E   S +D    LP  G
Sbjct: 137 MSPPGNVLNLTMPKYEPNPSIIDPGPALPPTG 168


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.137    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,584
Number of Sequences: 317
Number of extensions: 3249
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 4
length of query: 377
length of database: 114,650
effective HSP length: 58
effective length of query: 319
effective length of database: 96,264
effective search space: 30708216
effective search space used: 30708216
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)