Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001982-TA|BGIBMGA001982-PA|IPR002931|Transglutaminase-
like
(472 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 210 2e-54
SB_58037| Best HMM Match : DUF750 (HMM E-Value=1.8) 68 1e-11
SB_34158| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.22
SB_13395| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.28
SB_52928| Best HMM Match : PKD (HMM E-Value=0) 31 1.5
SB_4675| Best HMM Match : DUF842 (HMM E-Value=1.5) 31 1.5
SB_46816| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_58536| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.0
SB_21743| Best HMM Match : rve (HMM E-Value=4e-17) 31 2.0
SB_31268| Best HMM Match : zf-C2H2 (HMM E-Value=5.04467e-44) 31 2.7
SB_31771| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.5
SB_57835| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.6
SB_56534| Best HMM Match : RVT_1 (HMM E-Value=5.5e-28) 30 4.6
SB_3041| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.6
SB_33095| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.6
SB_45570| Best HMM Match : Euplotes_phero (HMM E-Value=2.6) 29 6.1
SB_38976| Best HMM Match : BACK (HMM E-Value=3.09967e-42) 29 6.1
SB_4361| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.1
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 210 bits (513), Expect = 2e-54
Identities = 102/257 (39%), Positives = 147/257 (57%), Gaps = 11/257 (4%)
Query: 42 QTKNRFLLKIQDLFNGMQVYEDEDLLAHARDQIPLVTLQLMALDRVREQQKKIKMGEIKA 101
Q++ +F K++ + + +YED DL AR +P+ L+ + E K + K
Sbjct: 205 QSQAQFYAKLKSSSDHVMIYEDPDLQKRARSHLPVRELE----QKAEEMSKASRDSGGKC 260
Query: 102 NDLPFDTALLMELLDWFKHDFFKWVDKPDCDLCGERTVNHENAIMTIEGETCRV---ELY 158
D+ L++ LL+WFK FF+W+DKP+C C + V H+ + T+E + V E Y
Sbjct: 261 VDVK--DCLILVLLEWFK-GFFQWMDKPECKSCRQVAVYHQRGVPTLEEQEWGVGVVEEY 317
Query: 159 QCTVCEGGTAMFPRYXXXXXXXXXXSGRCGEWANCFTLLCRALGYDTRYVYDVTDHVWCE 218
+C C FPRY GRCGEWANCFT+ CR LG++TR+V D TDHVW E
Sbjct: 318 KCPTCSQ-QIRFPRYNHPAKLLETRCGRCGEWANCFTMFCRVLGFETRHVIDWTDHVWTE 376
Query: 219 VFDYDSNQWLHVDPCEAKLNTPLMYSHGWGKRLSYVIAFSRDDLQDVTWRYTTNHKEVLK 278
V+ ++WLH D CE + PL+Y GWGK+LSY+IAFS++++ DVTWRY+ NH+ V
Sbjct: 377 VYSESQSRWLHCDSCECACDKPLVYEAGWGKKLSYIIAFSKEEVFDVTWRYSANHEAVRM 436
Query: 279 YRYLCTETELISTIMTL 295
R +E L M +
Sbjct: 437 RRTQVSEQWLADVTMKM 453
>SB_58037| Best HMM Match : DUF750 (HMM E-Value=1.8)
Length = 281
Score = 68.1 bits (159), Expect = 1e-11
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 337 LPGWHAAVLHAANVFRKVEPDWLQSYIAREEGEDFGSISWAFAASEE-LTCASLSIKVRT 395
L W + ++FRKVE DW +Y+AR EG GS+SW SE L ++ + + +
Sbjct: 105 LEDWKSGTNGVESIFRKVEHDWKMAYLARNEGCQTGSVSWKVDVSESGLVIDTVDLVISS 164
Query: 396 ALYESGRIDWTVKFDDENPTTVTLSDKPT 424
+E+G++DW++ DD+ + L +P+
Sbjct: 165 ITFENGKVDWSIHGDDKEKQFIKLEGEPS 193
Score = 37.1 bits (82), Expect = 0.031
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 428 RKFRKVIIKAELSGGDGPVRWQHAQLFRQH-TYSKRSSFIVTIVVQ 472
R + + + A++SGG G WQHAQLFRQ T++ + I +Q
Sbjct: 236 RGAKTLTLTAQMSGGQGDNAWQHAQLFRQSITHTDEYPLDIDITLQ 281
>SB_34158| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 506
Score = 34.3 bits (75), Expect = 0.22
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 338 PGWHAAVLHAANVFRKVEPDWLQSYIAREEGEDFGSISWAFAASE-ELTCASLSIKVRTA 396
PGW V +V R V+ Q Y R G GSISW F S+ L +++KV
Sbjct: 66 PGWERGVFSFDSVNRIVDEKSEQVYFDRTPGSATGSISWKFDFSKCGLLVDEVTVKVCCD 125
Query: 397 LYESGRIDWTVKFD 410
G I T+ D
Sbjct: 126 EGYGGEITTTLSGD 139
>SB_13395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 33.9 bits (74), Expect = 0.28
Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 222 YDSNQWLHV--DPCEAKLNTPLMYSHGWGKRLSYVIAFSRDDLQDVTWRYTTNHKEVLKY 279
YDSN+ V D C+ L L+ S GKR IAF+ L D RY KE L
Sbjct: 866 YDSNKRSIVAADACQDGLGAVLLQSDSSGKRCP--IAFASRSLNDTEKRYAVIEKEALAA 923
Query: 280 RYLC 283
+ C
Sbjct: 924 TWAC 927
>SB_52928| Best HMM Match : PKD (HMM E-Value=0)
Length = 1624
Score = 31.5 bits (68), Expect = 1.5
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 338 PGWHAAVLHAANVFRKVEPDWLQSYIAREEGEDFGSISWAFAASEELTCASLSIKVRTAL 397
PG A L A N+ +++ ++ Y+ EE G + A + +L +SL +K+RT+L
Sbjct: 203 PGKFAIELTAMNLVDRID---IRQYVTVEE-RITGLNASAEPTTFKLGDSSLVVKIRTSL 258
Query: 398 YESGRIDWTVKFDDENPTTVTLSD 421
+ + + +FDD N V+ SD
Sbjct: 259 VKGTGVTYQYEFDD-NTELVSTSD 281
>SB_4675| Best HMM Match : DUF842 (HMM E-Value=1.5)
Length = 160
Score = 31.5 bits (68), Expect = 1.5
Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 5/50 (10%)
Query: 263 QDVTWRYTTNHKEVLKYRYLCTET--ELISTIMTLRKHKQRDVTEARRRY 310
+D++ RY + E+ ++ Y+ + ELIST L KQ++V +A+RRY
Sbjct: 101 RDLSLRYQS---ELKRHNYVTPTSYLELISTFKALLNKKQQEVVKAKRRY 147
>SB_46816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1165
Score = 31.5 bits (68), Expect = 1.5
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 220 FDYDSNQWLHVDPCEAKLNTPLMYSHGWGKRLSYVIAFSRDDLQDVTWRYTTNHKEVLKY 279
+D + + D C+ L L+ S G R IAF+ L D RY KE L
Sbjct: 729 YDPNKRSIVAADACQDGLGAVLLQSDSSGNRRP--IAFASRSLNDTEKRYAVIEKEALAA 786
Query: 280 RYLCTETE--LISTIMTLRK 297
+ C + ++ T TL++
Sbjct: 787 TWACEKFSDYILGTPFTLKR 806
>SB_58536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 301
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 220 FDYDSNQWLHVDPCEAKLNTPLMYSHGWGKRLSYVIAFSRDDLQDVTWRYTTNHKEVLKY 279
+D + + D C+ L L+ S G G R IAF+ L D RY KE L
Sbjct: 194 YDPNKRSIVAADACQDGLGAVLLQSDGSGNRRP--IAFASRYLNDTEKRYAVIEKEALAA 251
Query: 280 RYLC 283
+ C
Sbjct: 252 TWAC 255
>SB_21743| Best HMM Match : rve (HMM E-Value=4e-17)
Length = 865
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 220 FDYDSNQWLHVDPCEAKLNTPLMYSHGWGKRLSYVIAFSRDDLQDVTWRYTTNHKEVLKY 279
+D + + D C+ L L+ S G G R IAF+ L D RY KE L
Sbjct: 405 YDPNKRSIVAADACQDGLGAVLLQSDGSGNRRP--IAFASRYLNDTEKRYAVIEKEALAA 462
Query: 280 RYLC 283
+ C
Sbjct: 463 TWAC 466
>SB_31268| Best HMM Match : zf-C2H2 (HMM E-Value=5.04467e-44)
Length = 454
Score = 30.7 bits (66), Expect = 2.7
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 405 WTVKFDDENPTTVTLSDKPTKFARKFRKVIIKAELSGGD----GPVRWQHAQLFRQHTYS 460
W + F + + T S K + A +I E SGGD PV + F ++T+S
Sbjct: 27 WVIPFQNSSSQENTFSPKDEETANSTESLIAGQEASGGDDAKASPV-LESQPFFTKYTFS 85
Query: 461 KRSSFIVT 468
SS +VT
Sbjct: 86 PDSSPLVT 93
>SB_31771| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1963
Score = 30.3 bits (65), Expect = 3.5
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 220 FDYDSNQWLHVDPCEAKLNTPLMYSHGWGKRLSYVIAFSRDDLQDVTWRYTTNHKEVLKY 279
+D + + D C+ L L+ S G R IAF+ L D+ RY KE L
Sbjct: 1377 YDPNKRSIVAADACQDGLGAVLLQSDSSGNRRP--IAFASRSLNDMEKRYAVIEKEALAA 1434
Query: 280 RYLC 283
+ C
Sbjct: 1435 TWAC 1438
>SB_57835| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 29.9 bits (64), Expect = 4.6
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Query: 220 FDYDSNQWLHVDPCEAKLNTPLMYSHGWGKRLSYVIAFSRDDLQDVTWRYTTNHKEVLKY 279
+D + + D C+ L L+ S G R IAF+ L D RY KE L
Sbjct: 693 YDPNKRSIVAADACQDGLGAVLLQSDSSGNRRP--IAFASRSLNDTEKRYAVIEKEALAA 750
Query: 280 RYLC 283
+ C
Sbjct: 751 TWAC 754
>SB_56534| Best HMM Match : RVT_1 (HMM E-Value=5.5e-28)
Length = 1052
Score = 29.9 bits (64), Expect = 4.6
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Query: 220 FDYDSNQWLHVDPCEAKLNTPLMYSHGWGKRLSYVIAFSRDDLQDVTWRYTTNHKEVLKY 279
+D + + D C+ L L+ S G R IAF+ L D RY KE L
Sbjct: 630 YDPNKRSIVAADACQDGLGAVLLQSDSSGNRRP--IAFASRSLNDTEKRYAVIEKEALAA 687
Query: 280 RYLC 283
+ C
Sbjct: 688 TWAC 691
>SB_3041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 939
Score = 29.9 bits (64), Expect = 4.6
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Query: 220 FDYDSNQWLHVDPCEAKLNTPLMYSHGWGKRLSYVIAFSRDDLQDVTWRYTTNHKEVLKY 279
+D + + D C+ L L+ S G R IAF+ L D RY KE L
Sbjct: 353 YDPNKRSIVAADACQDGLGAVLLQSDSSGNRRP--IAFASRSLNDTEKRYAVIEKEALAA 410
Query: 280 RYLC 283
+ C
Sbjct: 411 TWAC 414
>SB_33095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 29.9 bits (64), Expect = 4.6
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Query: 220 FDYDSNQWLHVDPCEAKLNTPLMYSHGWGKRLSYVIAFSRDDLQDVTWRYTTNHKEVLKY 279
+D + + D C+ L L+ S G R IAF+ L D RY KE L
Sbjct: 274 YDPNKRSIVAADACQDGLGAVLLQSDSSGNRRP--IAFASRSLNDTEKRYAVIEKEALAA 331
Query: 280 RYLC 283
+ C
Sbjct: 332 TWAC 335
>SB_45570| Best HMM Match : Euplotes_phero (HMM E-Value=2.6)
Length = 388
Score = 29.5 bits (63), Expect = 6.1
Identities = 24/103 (23%), Positives = 36/103 (34%), Gaps = 10/103 (9%)
Query: 189 EWANCFTLLCRALGYD----TRYVYDVTDHVWCEVFDYDSNQWLHVDPCEAKLNTPLMYS 244
EW C + ++ T Y + HVWC +Y + HV C + M
Sbjct: 254 EWCTCTEYSEHMIHHEWCTCTEYSEHMVHHVWCTCTEYSEHMVHHV-WCTCTEYSEHMVH 312
Query: 245 HGWGKRLSYVIAFSRDDLQDVTWRYTTNHKEVLKYRYLCTETE 287
H W Y + + W T + E + + CT TE
Sbjct: 313 HVWCTCTEY-----SEHMVHHEWCTCTEYSEHMVHHVWCTCTE 350
>SB_38976| Best HMM Match : BACK (HMM E-Value=3.09967e-42)
Length = 603
Score = 29.5 bits (63), Expect = 6.1
Identities = 32/136 (23%), Positives = 49/136 (36%), Gaps = 13/136 (9%)
Query: 110 LLMELLDWFKHDFFKWVDKPDCDLCGERTVNHENAIMTIEGETCRVELYQCTVCEGGTA- 168
LL LD FF W D CD N + ++ +EG +LY C GG +
Sbjct: 321 LLRYPLDQSNKSFFSWTDMASCDQLA-TACNDQTNLVAMEG-----QLYIVGGCNGGASG 374
Query: 169 ----MFPRYXXXXXXXXXXSGRCGEWANCFTLLCRALGYDTRYVYDVTDHVWCEVFDYDS 224
P + RC A F +G T ++ + V E ++ +
Sbjct: 375 RVQCYNPGNNVWTTVASCLTPRCQVGAVAFNSHLYIIGGTTEHLSQPVNLV--ERYNPAA 432
Query: 225 NQWLHVDPCEAKLNTP 240
+ W V P ++K P
Sbjct: 433 DSWTLVCPMKSKRRAP 448
>SB_4361| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 29.1 bits (62), Expect = 8.1
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Query: 220 FDYDSNQWLHVDPCEAKLNTPLMYSHGWGKRLSYVIAFSRDDLQDVTWRYTTNHKEVLKY 279
+D + + D C+ L L+ S G R IAF+ L D RY KE L
Sbjct: 168 YDPNKRSIVAADACQDGLGAVLLQSDSSGNRRP--IAFASRSLNDTEKRYAVIEKEELAA 225
Query: 280 RYLC 283
+ C
Sbjct: 226 TWAC 229
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.323 0.136 0.429
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,191,680
Number of Sequences: 59808
Number of extensions: 680566
Number of successful extensions: 1557
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1540
Number of HSP's gapped (non-prelim): 24
length of query: 472
length of database: 16,821,457
effective HSP length: 85
effective length of query: 387
effective length of database: 11,737,777
effective search space: 4542519699
effective search space used: 4542519699
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 62 (29.1 bits)
- SilkBase 1999-2023 -