GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001981-TA|BGIBMGA001981-PA|undefined
         (805 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U86404-1|AAB49975.2|  993|Drosophila melanogaster egalitarian pr...    33   1.6  
BT009999-1|AAQ22468.1| 1004|Drosophila melanogaster RE33408p pro...    33   1.6  
AE013599-3677|AAF47054.3|  885|Drosophila melanogaster CG4051-PA...    33   1.6  
AY060485-1|AAL25524.1|  696|Drosophila melanogaster SD09360p pro...    31   8.4  
AE014298-2787|AAF48900.2| 2030|Drosophila melanogaster CG32542-P...    31   8.4  

>U86404-1|AAB49975.2|  993|Drosophila melanogaster egalitarian
           protein.
          Length = 993

 Score = 33.1 bits (72), Expect = 1.6
 Identities = 15/40 (37%), Positives = 22/40 (55%)

Query: 735 ALRAYASTTHARLAHISPRHYADFVDFLGKARDTFALAHD 774
           +L  + S    ++ HIS +H  +F DFL K  DTF +  D
Sbjct: 110 SLLGHRSQASPQVRHISGQHIKEFTDFLMKHTDTFKVTDD 149


>BT009999-1|AAQ22468.1| 1004|Drosophila melanogaster RE33408p
           protein.
          Length = 1004

 Score = 33.1 bits (72), Expect = 1.6
 Identities = 15/40 (37%), Positives = 22/40 (55%)

Query: 735 ALRAYASTTHARLAHISPRHYADFVDFLGKARDTFALAHD 774
           +L  + S    ++ HIS +H  +F DFL K  DTF +  D
Sbjct: 121 SLLGHRSQASPQVRHISGQHIKEFTDFLMKHTDTFKVTDD 160


>AE013599-3677|AAF47054.3|  885|Drosophila melanogaster CG4051-PA
           protein.
          Length = 885

 Score = 33.1 bits (72), Expect = 1.6
 Identities = 15/40 (37%), Positives = 22/40 (55%)

Query: 735 ALRAYASTTHARLAHISPRHYADFVDFLGKARDTFALAHD 774
           +L  + S    ++ HIS +H  +F DFL K  DTF +  D
Sbjct: 121 SLLGHRSQASPQVRHISGQHIKEFTDFLMKHTDTFKVTDD 160


>AY060485-1|AAL25524.1|  696|Drosophila melanogaster SD09360p
           protein.
          Length = 696

 Score = 30.7 bits (66), Expect = 8.4
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 3/46 (6%)

Query: 504 SVNWRRREM---VRWLVTCATELGLDALLSIMQNWYELFTPTEATG 546
           S NW  R     V W++  A E+G  A+  ++  W    TP EA G
Sbjct: 56  SPNWLSRTYSSHVSWILGQAMEIGAPAISFLIDTWEAHLTPPEAAG 101


>AE014298-2787|AAF48900.2| 2030|Drosophila melanogaster CG32542-PA
            protein.
          Length = 2030

 Score = 30.7 bits (66), Expect = 8.4
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 3/46 (6%)

Query: 504  SVNWRRREM---VRWLVTCATELGLDALLSIMQNWYELFTPTEATG 546
            S NW  R     V W++  A E+G  A+  ++  W    TP EA G
Sbjct: 1390 SPNWLSRTYSSHVSWILGQAMEIGAPAISFLIDTWEAHLTPPEAAG 1435


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.321    0.132    0.422 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,896,293
Number of Sequences: 52641
Number of extensions: 1308295
Number of successful extensions: 3250
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3243
Number of HSP's gapped (non-prelim): 9
length of query: 805
length of database: 24,830,863
effective HSP length: 91
effective length of query: 714
effective length of database: 20,040,532
effective search space: 14308939848
effective search space used: 14308939848
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 66 (30.7 bits)