GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001980-TA|BGIBMGA001980-PA|undefined
         (128 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK024452-1|BAB15742.1| 1051|Homo sapiens FLJ00044 protein protein.     83   2e-16
AL592294-1|CAI21483.1| 1185|Homo sapiens zinc finger, SWIM-type ...    56   5e-08
AL359473-7|CAI16443.1| 1185|Homo sapiens zinc finger, SWIM-type ...    56   5e-08
AB040944-1|BAA96035.1| 1253|Homo sapiens KIAA1511 protein protein.     56   5e-08

>AK024452-1|BAB15742.1| 1051|Homo sapiens FLJ00044 protein protein.
          Length = 1051

 Score = 83.4 bits (197), Expect = 2e-16
 Identities = 42/85 (49%), Positives = 56/85 (65%), Gaps = 2/85 (2%)

Query: 15  LLDITAKIVAANIPFQXXXXXXXXXXXXVQRRVVYWSFPRDERDICMYSSLARAPPD-DH 73
           LLD++AK VA +  F+            VQ+R+V+WSFPR ER+ICMYSSL   PP+ +H
Sbjct: 97  LLDLSAKRVAESWAFEQVEERFSRVPEPVQKRIVFWSFPRSEREICMYSSLGYPPPEGEH 156

Query: 74  -RNIAFCRGLKLLEAGCVENVLQVG 97
              + F RGL LL++G V+ VLQVG
Sbjct: 157 DARVPFTRGLHLLQSGAVDRVLQVG 181


>AL592294-1|CAI21483.1| 1185|Homo sapiens zinc finger, SWIM-type
           containing 5 protein.
          Length = 1185

 Score = 55.6 bits (128), Expect = 5e-08
 Identities = 26/51 (50%), Positives = 32/51 (62%)

Query: 14  TLLDITAKIVAANIPFQXXXXXXXXXXXXVQRRVVYWSFPRDERDICMYSS 64
           +LLD  AK VA    ++            VQRR+VYWSFPR+ER+ICMYSS
Sbjct: 64  SLLDCAAKTVAEKWAYERVEERFERIPEPVQRRIVYWSFPRNEREICMYSS 114



 Score = 34.7 bits (76), Expect = 0.090
 Identities = 20/51 (39%), Positives = 28/51 (54%)

Query: 76  IAFCRGLKLLEAGCVENVLQVGECPPATRLRLFTNMRLAHPRRINKNLDVC 126
           + F RG++LL++G VENVLQVG     T   L T    A   ++  + D C
Sbjct: 178 LPFRRGIRLLDSGSVENVLQVGFHLSGTVTELATASEPAVTYKVAISFDRC 228


>AL359473-7|CAI16443.1| 1185|Homo sapiens zinc finger, SWIM-type
           containing 5 protein.
          Length = 1185

 Score = 55.6 bits (128), Expect = 5e-08
 Identities = 26/51 (50%), Positives = 32/51 (62%)

Query: 14  TLLDITAKIVAANIPFQXXXXXXXXXXXXVQRRVVYWSFPRDERDICMYSS 64
           +LLD  AK VA    ++            VQRR+VYWSFPR+ER+ICMYSS
Sbjct: 64  SLLDCAAKTVAEKWAYERVEERFERIPEPVQRRIVYWSFPRNEREICMYSS 114



 Score = 34.7 bits (76), Expect = 0.090
 Identities = 20/51 (39%), Positives = 28/51 (54%)

Query: 76  IAFCRGLKLLEAGCVENVLQVGECPPATRLRLFTNMRLAHPRRINKNLDVC 126
           + F RG++LL++G VENVLQVG     T   L T    A   ++  + D C
Sbjct: 178 LPFRRGIRLLDSGSVENVLQVGFHLSGTVTELATASEPAVTYKVAISFDRC 228


>AB040944-1|BAA96035.1| 1253|Homo sapiens KIAA1511 protein protein.
          Length = 1253

 Score = 55.6 bits (128), Expect = 5e-08
 Identities = 26/51 (50%), Positives = 32/51 (62%)

Query: 14  TLLDITAKIVAANIPFQXXXXXXXXXXXXVQRRVVYWSFPRDERDICMYSS 64
           +LLD  AK VA    ++            VQRR+VYWSFPR+ER+ICMYSS
Sbjct: 132 SLLDCAAKTVAEKWAYERVEERFERIPEPVQRRIVYWSFPRNEREICMYSS 182



 Score = 34.7 bits (76), Expect = 0.090
 Identities = 20/51 (39%), Positives = 28/51 (54%)

Query: 76  IAFCRGLKLLEAGCVENVLQVGECPPATRLRLFTNMRLAHPRRINKNLDVC 126
           + F RG++LL++G VENVLQVG     T   L T    A   ++  + D C
Sbjct: 246 LPFRRGIRLLDSGSVENVLQVGFHLSGTVTELATASEPAVTYKVAISFDRC 296


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.328    0.140    0.445 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,065,182
Number of Sequences: 224733
Number of extensions: 459987
Number of successful extensions: 721
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 713
Number of HSP's gapped (non-prelim): 7
length of query: 128
length of database: 73,234,838
effective HSP length: 82
effective length of query: 46
effective length of database: 54,806,732
effective search space: 2521109672
effective search space used: 2521109672
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 60 (28.3 bits)