Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001979-TA|BGIBMGA001979-PA|IPR003112|Olfactomedin-like,
IPR007110|Immunoglobulin-like, IPR008161|Collagen helix repeat,
IPR008160|Collagen triple helix repeat, IPR013098|Immunoglobulin I-set
(665 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 33 0.008
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 32 0.013
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 28 0.28
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 26 1.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 26 1.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 26 1.1
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 25 1.5
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 25 2.6
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 25 2.6
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 25 2.6
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 24 3.5
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 24 3.5
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 24 4.6
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 24 4.6
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 24 4.6
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 24 4.6
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 23 6.1
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 33.1 bits (72), Expect = 0.008
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 242 TLEKELFIPPTFAQDHTRVIVRESERLRLSCNPMGRPEPSVEWRR 286
T + ++ +PP + + T V V ++ + L C G P P++ W++
Sbjct: 701 TAKLQVKVPPRWIVEPTDVSVERNKHVALHCQAQGVPTPTIVWKK 745
Score = 24.2 bits (50), Expect = 3.5
Identities = 9/35 (25%), Positives = 13/35 (37%)
Query: 250 PPTFAQDHTRVIVRESERLRLSCNPMGRPEPSVEW 284
PP ++ + L C+ G P P V W
Sbjct: 421 PPMLLYSFIEQTLQPGPAVSLKCSAAGNPTPQVTW 455
Score = 23.8 bits (49), Expect = 4.6
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 259 RVIVRESERLRLSCNPMGRPEPSVEWRR 286
+V E LRL C G P ++W R
Sbjct: 527 KVTAVAGETLRLKCPVAGYPIEEIKWER 554
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 32.3 bits (70), Expect = 0.013
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 240 NNTLEKELFIPPTFAQDHTRVIVRESERLRLSCNPMGRPEPSVEWRR 286
++T + +PP + + T V V ++ + L C G P P++ W++
Sbjct: 695 SHTQRLVVHVPPRWIVEPTDVSVERNKHVALHCQAQGVPTPTIVWKK 741
Score = 24.2 bits (50), Expect = 3.5
Identities = 9/35 (25%), Positives = 13/35 (37%)
Query: 250 PPTFAQDHTRVIVRESERLRLSCNPMGRPEPSVEW 284
PP ++ + L C+ G P P V W
Sbjct: 421 PPMLLYSFIEQTLQPGPAVSLKCSAAGNPTPQVTW 455
Score = 23.8 bits (49), Expect = 4.6
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 259 RVIVRESERLRLSCNPMGRPEPSVEWRR 286
+V E LRL C G P ++W R
Sbjct: 527 KVTAVAGETLRLKCPVAGYPIEEIKWER 554
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 27.9 bits (59), Expect = 0.28
Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 230 APGRPGLSIYNNTLEKELFIPPTFAQDHTRVIVRESERLRLSCNPMGRPEPSVEWRR 286
A G + ++ TL +PP + + T + R+ C G P+P V W++
Sbjct: 660 AENAAGTASHSTTLTVN--VPPRWILEPTDKAFAQGSDARVECKADGFPKPQVTWKK 714
Score = 27.5 bits (58), Expect = 0.37
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 3/96 (3%)
Query: 292 LIQIQAWPEPVLAWECDGVTIEGSRYKSEVIPTGDTWRWIMTLEILGVRDNDMRQYSCVA 351
L Q +P PV W IEGS + V + TL I R D +Y C+
Sbjct: 233 LCPAQGFPVPVHRWY---KFIEGSSRRQPVQLNERVRQVSGTLIIREARVEDSGKYLCIV 289
Query: 352 KNELKNQTIKGDIRLMYPGPNQPTQVMQPIEYGSRA 387
N + ++++ + + P + Q I++G A
Sbjct: 290 NNSVGGESVETVLTVTAPLGAEIEPSTQTIDFGRPA 325
Score = 25.8 bits (54), Expect = 1.1
Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Query: 248 FIPPTFAQDHTRVIVRESERLRLSCNPMGRPEPSVEW----RRYDDTALIQI 295
F PP Q ++ + L C G P P + W +R +T +Q+
Sbjct: 391 FEPPQIRQAFAEETLQPGPSMFLKCVASGNPTPEITWELDGKRLSNTERLQV 442
Score = 25.0 bits (52), Expect = 2.0
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 270 LSCNPMGRPEPSVEWRRYDDTAL 292
+ C G P+P + W R D +A+
Sbjct: 23 VECQARGNPQPDIIWVRADGSAV 45
Score = 25.0 bits (52), Expect = 2.0
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 242 TLEKELFIPPTFAQ-DHTRVIVRESERLRLSC-NPMGRPEPSVEW 284
TLE ++ +PPT Q T++ + E L C P G ++ W
Sbjct: 574 TLEVQVMVPPTIQQFSFTKLPMNAGEFANLQCIVPTGDLPLNIRW 618
Score = 24.6 bits (51), Expect = 2.6
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 249 IPPTFAQDHTRVIVRESERLRLSCNPMGRPEPSVEWR 285
+P A + E ++L C +G P P V W+
Sbjct: 1275 VPAKIASFDDKFTATYKEDVKLPCLAVGVPAPEVTWK 1311
Score = 24.2 bits (50), Expect = 3.5
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 266 ERLRLSCNPMGRPEPSVEWRRYDDTALIQI 295
E LR++C G P S+ W R DT ++ I
Sbjct: 506 ETLRVTCPVAGYPIESIVWER--DTRVLPI 533
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 25.8 bits (54), Expect = 1.1
Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 414 LITPMNGTTTYIKPRR-NTNCQLYAIGKPVYHRYKEELFGAWLRDSNATDV 463
++ NG+ Y+ P + C++ P ++ + FG+W D N D+
Sbjct: 91 VVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDL 141
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.8 bits (54), Expect = 1.1
Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 414 LITPMNGTTTYIKPRR-NTNCQLYAIGKPVYHRYKEELFGAWLRDSNATDV 463
++ NG+ Y+ P + C++ P ++ + FG+W D N D+
Sbjct: 159 VVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDL 209
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.8 bits (54), Expect = 1.1
Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 414 LITPMNGTTTYIKPRR-NTNCQLYAIGKPVYHRYKEELFGAWLRDSNATDV 463
++ NG+ Y+ P + C++ P ++ + FG+W D N D+
Sbjct: 159 VVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDL 209
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 25.4 bits (53), Expect = 1.5
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 260 VIVRESERLRLSCNPMGRPEPSVEWRR 286
+ R + + + C+ G P P + WRR
Sbjct: 320 ISARVGDNVEIKCDVTGTPPPPLVWRR 346
Score = 25.4 bits (53), Expect = 1.5
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 263 RESERLRLSCNPMGRPEPSVEWRRYDD 289
R E + C+ G P P V+W + D+
Sbjct: 414 RLKEEANIRCHVAGEPLPRVQWLKNDE 440
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 24.6 bits (51), Expect = 2.6
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 471 TQENDIERLREYRNKASFKSDHVDEFHKLQKPFY 504
++ + I +L + RNK S S + D F P Y
Sbjct: 479 SKSSSINKLEDLRNKKSCHSGYKDSFAGWTAPIY 512
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 24.6 bits (51), Expect = 2.6
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 471 TQENDIERLREYRNKASFKSDHVDEFHKLQKPFY 504
++ + I +L + RNK S S + D F P Y
Sbjct: 479 SKSSSINKLEDLRNKKSCHSGYKDSFAGWTAPIY 512
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 24.6 bits (51), Expect = 2.6
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 471 TQENDIERLREYRNKASFKSDHVDEFHKLQKPFY 504
++ + I +L + RNK S S + D F P Y
Sbjct: 479 SKSSSINKLEDLRNKKSCHSGYKDSFAGWTAPIY 512
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 24.2 bits (50), Expect = 3.5
Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 414 LITPMNGTTTYIKPRR-NTNCQLYAIGKPVYHRYKEELFGAWLRDSNATDV 463
++ +G+ Y+ P + C++ P ++ + FG+W D N D+
Sbjct: 91 VVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDL 141
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 24.2 bits (50), Expect = 3.5
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 157 GLDGMFGRNGADGAPGKDGRDGMPGKDGSP 186
G+DGM G A +PG P +G P
Sbjct: 103 GMDGMGGYRSASPSPGMGHMGHTPTPNGHP 132
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.8 bits (49), Expect = 4.6
Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 414 LITPMNGTTTYIKPRR-NTNCQLYAIGKPVYHRYKEELFGAWLRDSNATDV 463
++ +G+ Y+ P + C++ P ++ + FG+W D N D+
Sbjct: 91 VVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDL 141
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.8 bits (49), Expect = 4.6
Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 414 LITPMNGTTTYIKPRR-NTNCQLYAIGKPVYHRYKEELFGAWLRDSNATDV 463
++ +G+ Y+ P + C++ P ++ + FG+W D N D+
Sbjct: 91 VVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDL 141
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.8 bits (49), Expect = 4.6
Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 414 LITPMNGTTTYIKPRR-NTNCQLYAIGKPVYHRYKEELFGAWLRDSNATDV 463
++ +G+ Y+ P + C++ P ++ + FG+W D N D+
Sbjct: 91 VVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDL 141
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.8 bits (49), Expect = 4.6
Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 414 LITPMNGTTTYIKPRR-NTNCQLYAIGKPVYHRYKEELFGAWLRDSNATDV 463
++ +G+ Y+ P + C++ P ++ + FG+W D N D+
Sbjct: 91 VVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDL 141
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 23.4 bits (48), Expect = 6.1
Identities = 15/95 (15%), Positives = 34/95 (35%)
Query: 400 QTCPTCPRCDRAQLLITPMNGTTTYIKPRRNTNCQLYAIGKPVYHRYKEELFGAWLRDSN 459
Q C + D L + MN N + Y ++ + F ++ +S+
Sbjct: 344 QVCRSRRHSDSCCLCLDSMNAVIRNFNESENRRNSCLGSTETYYSKHNTQQFTQYIPESS 403
Query: 460 ATDVQREKLWTTQENDIERLREYRNKASFKSDHVD 494
+ ++ K+ + I ++ + +S D D
Sbjct: 404 SNLQEKTKIDLLEIPPIRKISDCSTTSSLSGDESD 438
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.316 0.137 0.432
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,845
Number of Sequences: 429
Number of extensions: 9629
Number of successful extensions: 42
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 34
length of query: 665
length of database: 140,377
effective HSP length: 62
effective length of query: 603
effective length of database: 113,779
effective search space: 68608737
effective search space used: 68608737
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 47 (23.0 bits)
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