Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001978-TA|BGIBMGA001978-PA|IPR004837|Sodium/calcium
exchanger membrane region, IPR004481|K+-dependent Na+/Ca+ exchanger
related-protein
(350 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0292 - 2200714-2201478,2202691-2203395 66 5e-11
11_06_0626 - 25620409-25620706,25620814-25620943,25621034-256212... 61 1e-09
03_01_0564 - 4176177-4178096 59 5e-09
12_02_1175 + 26702744-26704507 54 2e-07
10_08_0133 + 15100049-15101836,15103344-15103382 53 3e-07
03_05_0545 + 25419031-25420758 49 6e-06
02_05_0116 - 25976234-25976394,25976485-25976701,25977345-259774... 40 0.002
02_04_0617 - 24422922-24422927,24423063-24423134,24423223-244233... 34 0.15
04_03_0358 - 14856490-14856573,14856829-14856874,14857116-148572... 32 0.79
07_01_0059 - 439518-439646,439767-439885,440003-440241,440320-44... 31 1.4
04_04_1399 - 33249210-33249359,33249521-33249597,33249735-332498... 29 5.6
04_03_0535 - 16850704-16853001,16854055-16854115,16854228-168543... 29 5.6
08_02_1564 + 27892707-27892760,27892875-27892946,27893049-278931... 29 7.3
10_08_0364 + 17217631-17217833,17218134-17218308,17218391-172184... 28 9.7
03_04_0065 + 16984736-16984835,16984932-16985369,16985511-169856... 28 9.7
02_02_0239 - 8177152-8177445,8177821-8178207,8178717-8179715,817... 28 9.7
>11_01_0292 - 2200714-2201478,2202691-2203395
Length = 489
Score = 65.7 bits (153), Expect = 5e-11
Identities = 38/151 (25%), Positives = 77/151 (50%), Gaps = 2/151 (1%)
Query: 193 VTFIGSIVWIAFFSYLMVWWANVAGSTAQVPPEVMGLTLLAAGTSVPDLITSVIVARKGF 252
++F+ S+ WI+ + ++ G PP ++G+T+LA G SV DL+ V +A+ G
Sbjct: 334 ISFVMSVFWISTMAGELLNCLAAIGVIMDFPPAILGMTVLAWGNSVGDLVADVALAKSGQ 393
Query: 253 GDMAVSSSVGSNIFDVTVGLPLPWLLY--GLINSEPVLVNSKGMVCSIVLLFAMLIFVIL 310
+A++ +F++ VGL ++ + VL G+V + V L L+ +L
Sbjct: 394 PTIAIAGCFAGPMFNMLVGLGTALVIQTARVYPKAYVLEFHVGIVVAFVFLLLSLMGTLL 453
Query: 311 SIACFKWKMNKGLGFTMFLLYFVFVAVSLGL 341
+ ++++ + G+ + LY +F VS+ +
Sbjct: 454 MVTWTRFRVPRFWGYCLMGLYILFTVVSIAI 484
>11_06_0626 -
25620409-25620706,25620814-25620943,25621034-25621250,
25621894-25622015,25622119-25622267,25622642-25622759,
25622840-25623185
Length = 459
Score = 60.9 bits (141), Expect = 1e-09
Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 6/117 (5%)
Query: 193 VTFIGSIVWIAFFSYLMVWWANVAGSTAQVPPEVMGLTLLAAGTSVPDLITSVIVA-RKG 251
+ FI S+++I+ +Y + + V P V+ T LAAGTS PDL+ S I A R+
Sbjct: 290 IAFICSLIFISGIAYGVTKITDQISCVTGVSPYVIAFTALAAGTSWPDLVASKIAAERQI 349
Query: 252 FGDMAVSSSVGSNIFDVTVGLPLPWLLYGLIN----SEPVLV-NSKGMVCSIVLLFA 303
D A+++ SN ++ VG+ +PWL+ + N +P+ + N+ G+ S+++ FA
Sbjct: 350 TADSAITNITCSNSVNIYVGIGVPWLVDTMYNYFVYQKPLYIDNAAGLSFSLLVFFA 406
>03_01_0564 - 4176177-4178096
Length = 639
Score = 59.3 bits (137), Expect = 5e-09
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 11/178 (6%)
Query: 181 DTRTPRGKGLFPVT---FIGSIVWIAFFSYLMVWWANVAGSTAQVPPEVMGLTLLAAGTS 237
D P + LFP F+ SI+W + +V G + P ++GLT+LA G S
Sbjct: 461 DHERPPRRFLFPWVLGGFVMSIIWFYIIANELVALLVAFGVILGINPSILGLTVLAWGNS 520
Query: 238 VPDLITSVIVARKGFGD---MAVSSSVGSNIFDVTVGLPLPWLLYGLINSEP---VLVNS 291
+ DL+++V +A G GD +A+S +F+ GL + LL G ++ P VL
Sbjct: 521 MGDLMSNVALAMNG-GDGVQIAMSGCYAGPMFNTLAGLGISMLL-GAWSTAPNSYVLPQD 578
Query: 292 KGMVCSIVLLFAMLIFVILSIACFKWKMNKGLGFTMFLLYFVFVAVSLGLEYDYLHCP 349
++ ++ L LI+ ++ + + NK LG + LY VF+ + + L P
Sbjct: 579 SSLIYTMSFLVGGLIWALVMLPRGGMQPNKILGVGLIALYSVFLFIRVSNAMGILPLP 636
Score = 36.7 bits (81), Expect = 0.028
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 221 QVPPEVMGLTLLAAGTSVPDLITSVIV-ARKGFGDMAVSSSVGSNIF 266
++PP V G+TLL G PD+ S+ G GD+ ++S +G +F
Sbjct: 165 RLPPTVAGVTLLPFGNGAPDVFASIAAFMGTGAGDVGLNSVLGGAVF 211
>12_02_1175 + 26702744-26704507
Length = 587
Score = 53.6 bits (123), Expect = 2e-07
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 195 FIGSIVWIAFFSYLMVWWANVAGSTAQVPPEVMGLTLLAAGTSVPDLITSVIVA-RKGFG 253
F+ S++W + +V G A V V+G T+LA G S+ DL+ V +A R+G G
Sbjct: 426 FLMSVLWSYVLARELVALLVSIGVAAGVEAGVLGATVLAWGNSLGDLVADVALATRRGDG 485
Query: 254 ----DMAVSSSVGSNIFDVTVGLPLPWLLY-GLINSEPVLVNSKGMV-CSIVLLFAMLIF 307
AV+ + F+ VGL L + G + E V V ++ L A L++
Sbjct: 486 GAGAQTAVAGCYAAPAFNTVVGLGLSLTVAAGARHPEAYAVEGGAAVYVAVGFLAAALVW 545
Query: 308 VILSIACFKWKMNKGLGFTMFLLYFVFVAVSLGL 341
+ + +++ LG + ++YFVF+ VSL +
Sbjct: 546 AVAVLPARGMRLDAVLGVGLLVIYFVFLCVSLAI 579
Score = 44.4 bits (100), Expect = 1e-04
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 19/124 (15%)
Query: 213 ANVAGSTA--QVPPEVMGLTLLAAGTSVPDLITSVIV----ARKG---------FGDMAV 257
A++ G +A ++PP + G+TLL+ G PD+++SV+ AR G GD+ +
Sbjct: 135 ASLEGLSAVLRLPPAIAGVTLLSLGNGAPDVLSSVVAFAAGARGGDGGGGGGEDAGDVGL 194
Query: 258 SSSVGSNIFDVTVGLPLPWLLYGLI-NSEPVLVNSKGM---VCSIVLLFAMLIFVILSIA 313
S +G +F TV + ++ G EPV++ +G VC +++ L+ V+L+ A
Sbjct: 195 SGVLGGALFVSTVVAGVVAIVAGRRGGGEPVIIERRGFVRDVCFLLVALCYLLAVLLTGA 254
Query: 314 CFKW 317
W
Sbjct: 255 VTVW 258
>10_08_0133 + 15100049-15101836,15103344-15103382
Length = 608
Score = 53.2 bits (122), Expect = 3e-07
Identities = 38/151 (25%), Positives = 76/151 (50%), Gaps = 6/151 (3%)
Query: 195 FIGSIVWIAFFSYLMVWWANVAGSTAQVPPEVMGLTLLAAGTSVPDLITSVIVARKGFG- 253
F+ S+ W + ++ A V +GLT+LA G S+ DL+ ++ VA +G G
Sbjct: 440 FVMSVAWAYAVATELLALLVSAAHVMGVDSAALGLTVLAWGNSLGDLVANLAVASRGGGG 499
Query: 254 ---DMAVSSSVGSNIFDVTVGLPLPWLLYG-LINSEPVLVNSK-GMVCSIVLLFAMLIFV 308
+AV+ G +FDV VGL + LL + PV + ++ G ++ A + +
Sbjct: 500 GGAQVAVAGCYGGPVFDVLVGLGVSMLLSSWASHPRPVAMPAEAGPFQTLGFAAAGICWA 559
Query: 309 ILSIACFKWKMNKGLGFTMFLLYFVFVAVSL 339
++ ++ ++++ LGF + +Y F+ +++
Sbjct: 560 VVVMSRRGMRVDRTLGFGLLAIYLCFLCINI 590
Score = 30.7 bits (66), Expect = 1.8
Identities = 29/124 (23%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Query: 221 QVPPEVMGLTLLAAGTSVPDLITSVIVARKGFGDMAVSSSVGSNIF---DVTVGLPLPWL 277
++ P + G+TLL+ G PD ++++ G G+ +++VG N + V + +
Sbjct: 153 RLSPAIAGVTLLSLGNGAPDALSTIASFASGGGE-GETTAVGLNGVLGSAMLVSSAVLGV 211
Query: 278 LYGLINSEPVLVNSKGMVCSIVLLFAMLIFVILSIACFKWKMNKGLGFT-MFLLYFVFVA 336
+ + + V V+ L A L V + +A + + L FT ++++Y V VA
Sbjct: 212 IGVRLGARGVAVDRVDFYRDASFLLAALAAVAVVLAAGEVTIWGALAFTSLYVVYVVAVA 271
Query: 337 VSLG 340
+ G
Sbjct: 272 FTHG 275
>03_05_0545 + 25419031-25420758
Length = 575
Score = 48.8 bits (111), Expect = 6e-06
Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 18/209 (8%)
Query: 151 LDMSWPSGFRKRLTYVLVAPIVFPLWITLPDTRT-----PRGKGL----FPVTFIGSIVW 201
L +W S R L +L ++ L L T PRG+ F+ S++W
Sbjct: 359 LAATWASSCRHALAVLLGGALLGLLLAALAAATTEAASPPRGRWRRVPWLAAGFLMSVLW 418
Query: 202 IAFFSYLMVWWANVAGSTAQVPPEVMGLTLLAAGTSVPDLITSVIVA---RKGFGDMAVS 258
+ +V G V V+G+T+LA G S+ DL+++V +A G AVS
Sbjct: 419 AYTLARELVALLVAIGYMVGVRASVLGVTVLAWGDSLGDLVSNVAMALHGGAGGAQTAVS 478
Query: 259 SSVGSNIFDVTVGLPLP-WLLYGLINSEPVLVNSKGMVCSIV-LLFAMLIFVILSIACFK 316
+F+ VGL L L G P + + G V V L A L + +L +
Sbjct: 479 GCYAGPLFNTVVGLGLSLTLAAGSQYPAPFAIPAGGAVYEAVGFLGAGLAWALLVVPARG 538
Query: 317 WKMNKGLGFTMFLLYFVFVAV----SLGL 341
++++ G + +Y FV + SLGL
Sbjct: 539 MRLDRVYGMGLIAIYLAFVTIRVFDSLGL 567
Score = 43.6 bits (98), Expect = 2e-04
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 13/136 (9%)
Query: 195 FIGSIVWIAFFSYLM------VWWANVAGSTAQV--PPEVMGLTLLAAGTSVPDLITSVI 246
+ +++W+A YL+ + A++ G +A++ PP + G+TLL+ G PD+ SV+
Sbjct: 117 YAAAVLWLAVLFYLLGDTASEYFCASLEGLSAELRLPPAIAGVTLLSLGNGAPDVFASVV 176
Query: 247 VARKG-FGDMAVSSSVGSNIFDVTVGLPLPWL-LYGLINSEPVLVNSKGMV---CSIVLL 301
G G + ++S++G +F TV + L V+V +G V C ++L
Sbjct: 177 SFAAGDGGGVGLNSALGGALFVSTVVAGVVALAAASRAGRGGVVVELRGFVRDICFLLLA 236
Query: 302 FAMLIFVILSIACFKW 317
L+ ++++ W
Sbjct: 237 LCSLLAILVTGTVTVW 252
>02_05_0116 -
25976234-25976394,25976485-25976701,25977345-25977466,
25977570-25977718,25978095-25978212,25978293-25978638
Length = 370
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 193 VTFIGSIVWIAFFSYLMVWWANVAGSTAQVPPEVMGLTLLAAGTSVPDLITSVIVA-RKG 251
+ FI S+++I+ +Y + + V P V+ T LAAGTS PDL+ S I A R+
Sbjct: 290 IAFICSLIFISGIAYGVTKITDQISCVTGVSPYVIAFTALAAGTSWPDLVASKIAAERQI 349
Query: 252 FGDMAVSS 259
D A+++
Sbjct: 350 TADSAIAN 357
>02_04_0617 -
24422922-24422927,24423063-24423134,24423223-24423324,
24423443-24423559,24423626-24423764,24423857-24423963,
24424052-24424161,24425749-24425882,24426005-24426145,
24426241-24426440,24426781-24426941,24427753-24427897
Length = 477
Score = 34.3 bits (75), Expect = 0.15
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 246 IVARKGFGDMAVSSSVGSNIFDVTVGLPLPWLLYGLINSEPVL-VNSKGMVCSIVLLFAM 304
+ AR G+G S+ +N F V+V P +L I+ EP L V K ++ IV L
Sbjct: 69 LAARPGYGSAGKKLSIFTNYFGVSVNCPAIYLYKVSIHPEPKLGVTKKAVLSEIVKLHGE 128
Query: 305 LIF 307
+F
Sbjct: 129 RVF 131
>04_03_0358 -
14856490-14856573,14856829-14856874,14857116-14857229,
14857366-14857401,14857822-14857946,14858052-14858117,
14858295-14858534,14858900-14859001,14859101-14859138,
14859219-14859321,14859402-14859524,14860666-14860742,
14860853-14860998,14861077-14861246
Length = 489
Score = 31.9 bits (69), Expect = 0.79
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Query: 183 RTPRGKGLFPVTFIGSIVWIAFFSYLMV--W--W---ANVAGSTAQVPPEVMGLTLLAAG 235
RTPRG + ++G+ W+ Y ++ W W VAG T + LT+ AG
Sbjct: 406 RTPRGDHDLCIPYVGTEAWVRSMGYRVIDHWRPWYFGGQVAGYTQGYEHNLTFLTIKGAG 465
Query: 236 TSVPD 240
+VP+
Sbjct: 466 HTVPE 470
>07_01_0059 -
439518-439646,439767-439885,440003-440241,440320-440376,
440480-440566,440664-441208,441967-442026,443552-443935,
444049-444114
Length = 561
Score = 31.1 bits (67), Expect = 1.4
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 7/153 (4%)
Query: 163 LTYVLVAPIVFPLWITLPDTRTPRGKGLFPVTFIGSIVW-IAFFSYLMVW---WANVAGS 218
+TY A I + L + K VT + S++ +AF L + WA +
Sbjct: 391 ITYGFAAAISTRVSNELGAGNVAKAKKALAVTLVLSLLLGVAFLLLLGLGHDLWAGLFSK 450
Query: 219 TAQVPPEVMGLTLLAAGTSVPDLITSVIVA-RKGFGDMAVSSSVGSNIFDVTVGLPLPWL 277
+ V E +T L G+ V D V+ +G G +++ F + VGLPL +
Sbjct: 451 SDAVISEFASMTPLLIGSVVLDSTQGVLSGVSRGCGWQHLAAWTNLVAFYI-VGLPLS-I 508
Query: 278 LYGLINSEPVLVNSKGMVCSIVLLFAMLIFVIL 310
L+G G +C ++L A+L+F+ L
Sbjct: 509 LFGFKLGLQTKGLWLGQICGLLLQNAVLLFITL 541
>04_04_1399 -
33249210-33249359,33249521-33249597,33249735-33249814,
33249904-33250094,33250183-33250469,33250595-33250721,
33250878-33250994,33251085-33251198,33251510-33251671,
33252909-33252974,33253098-33253269,33253377-33253584,
33253728-33253776,33254132-33254305
Length = 657
Score = 29.1 bits (62), Expect = 5.6
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 243 TSVIVARKGFGDMAVSSSVGSNIFDVTVGLPLPWLLYGLINSEPVLVNSKGMVCSIVLLF 302
TS V F AV+ + G V + L ++ L+ P+ V + +V +++
Sbjct: 390 TSCYVTTGAFSRSAVNHNAGCKTAMSNVIMALT-VMVTLLFLMPLFVYTPNVVLGAIIIA 448
Query: 303 AMLIFVILSIACFKWKMNKGLGFTMFLLYF---VFVAVSLGL 341
A++ + L WKM+K + F + L F +F++V GL
Sbjct: 449 AVIGLIDLPAVYNIWKMDK-MDFLVCLCAFAGVIFISVQQGL 489
>04_03_0535 -
16850704-16853001,16854055-16854115,16854228-16854323,
16854394-16854521,16855016-16855067,16855182-16855274,
16855473-16855590,16856456-16856609,16857512-16857643,
16859136-16859216,16859353-16859507,16860118-16860343,
16860423-16860507,16860593-16860689,16861785-16861949,
16862046-16862121,16863041-16863103,16863193-16863359,
16863495-16863669,16863743-16863835,16864694-16864810,
16865589-16865778,16866092-16866126
Length = 1618
Score = 29.1 bits (62), Expect = 5.6
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 284 SEPVLVNSKGMVCSI---VLLFAMLIFVILSIACFKWKMNKGLGFTMF----LLYFVFV 335
+EP L + M+ + + +F +++ ++L A WK N+GL F LLYF+ +
Sbjct: 216 AEPKLTAADAMIDKLTVAIFMFQIVVVLVLGFAGNIWKKNQGLKACSFLKALLLYFIIL 274
>08_02_1564 +
27892707-27892760,27892875-27892946,27893049-27893100,
27893225-27893305,27893768-27893886,27894102-27894321,
27894475-27894593,27894683-27894808,27894993-27895133,
27895240-27895563
Length = 435
Score = 28.7 bits (61), Expect = 7.3
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 246 IVARKGFGDMAVSSSVGSNIFDVTVGLPLPWLLYGLINS 284
++ G+ + +S+++ +N FDVT+ P PW + L S
Sbjct: 168 VIVGGGYIGLELSAALKTNNFDVTMVYPEPWCMPRLFTS 206
>10_08_0364 +
17217631-17217833,17218134-17218308,17218391-17218474,
17218561-17218802,17218883-17219108,17219246-17219325,
17219408-17219492,17219665-17219796,17219927-17220040,
17220123-17220170,17220413-17220497,17220722-17220834
Length = 528
Score = 28.3 bits (60), Expect = 9.7
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 230 TLLAAGTSVPDLITSVIVARKGFGDMAVSSSVGSNIFDVTVGLP 273
TL + PD I ++ +KG+G S+G+ ++++ VG P
Sbjct: 309 TLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 352
>03_04_0065 +
16984736-16984835,16984932-16985369,16985511-16985635,
16985747-16985881,16985954-16986012,16986082-16986843,
16986973-16987118,16987151-16987251
Length = 621
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 128 GLAGDVQLDAIEEIGDLEEDTTPL 151
G A D + + +EEIGDL E PL
Sbjct: 514 GAASDARKEVMEEIGDLGESVLPL 537
>02_02_0239 -
8177152-8177445,8177821-8178207,8178717-8179715,
8179799-8179953,8180725-8180812,8180901-8181004,
8181327-8181549,8182251-8182335,8182425-8182816,
8182852-8183097
Length = 990
Score = 28.3 bits (60), Expect = 9.7
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 28 IHTIDPMHDAWKFYRLLIDL 47
IHT+ M++ W F+R+ +DL
Sbjct: 829 IHTLKEMYNEWPFFRVTLDL 848
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.326 0.142 0.445
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,243,512
Number of Sequences: 37544
Number of extensions: 373727
Number of successful extensions: 1033
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1009
Number of HSP's gapped (non-prelim): 24
length of query: 350
length of database: 14,793,348
effective HSP length: 83
effective length of query: 267
effective length of database: 11,677,196
effective search space: 3117811332
effective search space used: 3117811332
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 60 (28.3 bits)
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