Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001978-TA|BGIBMGA001978-PA|IPR004837|Sodium/calcium
exchanger membrane region, IPR004481|K+-dependent Na+/Ca+ exchanger
related-protein
(350 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g47600.1 68415.m05939 magnesium/proton exchanger (MHX1) ident... 66 3e-11
At1g08960.1 68414.m00996 cation exchanger, putative (CAX11) simi... 64 1e-10
At5g17860.1 68418.m02093 cation exchanger, putative (CAX7) conta... 57 2e-08
At1g54115.1 68414.m06169 cation exchanger, putative 56 3e-08
At5g17850.1 68418.m02092 cation exchanger, putative (CAX8) simil... 45 9e-05
At2g34355.1 68415.m04205 nodulin-related contains 14 transmembra... 37 0.017
At3g14070.1 68416.m01777 cation exchanger, putative (CAX9) simil... 34 0.16
At1g69270.1 68414.m07941 leucine-rich repeat family protein / pr... 33 0.38
At1g23090.1 68414.m02887 sulfate transporter, putative similar t... 32 0.50
At3g09940.1 68416.m01190 monodehydroascorbate reductase, putativ... 30 2.0
At1g30640.1 68414.m03747 protein kinase, putative contains prote... 30 2.7
At5g15410.2 68418.m01803 cyclic nucleotide-regulated ion channel... 29 3.5
At5g15410.1 68418.m01804 cyclic nucleotide-regulated ion channel... 29 3.5
At1g31820.1 68414.m03908 amino acid permease family protein weak... 29 4.6
At1g21460.1 68414.m02683 nodulin MtN3 family protein contains si... 29 6.1
At2g20470.1 68415.m02390 protein kinase, putative contains prote... 28 8.1
>At2g47600.1 68415.m05939 magnesium/proton exchanger (MHX1)
identical to magnesium/proton exchanger AtMHX
[Arabidopsis thaliana] gi|6492237|gb|AAF14229;
Ca2+:Cation Antiporter (CaCA) Family member
PMID:11500563
Length = 539
Score = 66.1 bits (154), Expect = 3e-11
Identities = 40/138 (28%), Positives = 78/138 (56%), Gaps = 6/138 (4%)
Query: 193 VTFIGSIVWIAFFSYLMVWWANVAGSTAQVPPEVMGLTLLAAGTSVPDLITSVIVA-RKG 251
+ FI S+++I+ ++++ + ++ + P V+ T LA+GTS PDL+ S I A R+
Sbjct: 370 IAFICSLLFISGVAFVVTRFTDLISCVTGINPYVIAFTALASGTSWPDLVASKIAAERQL 429
Query: 252 FGDMAVSSSVGSNIFDVTVGLPLPWLLYGLIN----SEPVLV-NSKGMVCSIVLLFAMLI 306
D A+++ SN ++ VG+ +PWL+ + N EP+ + N+KG+ S+++ FA +
Sbjct: 430 TADSAIANITCSNSVNIYVGIGVPWLINTVYNYFAYREPLYIENAKGLSFSLLIFFATSV 489
Query: 307 FVILSIACFKWKMNKGLG 324
I+ + + + LG
Sbjct: 490 GCIVVLVLRRLIIGAELG 507
>At1g08960.1 68414.m00996 cation exchanger, putative (CAX11) similar
to sodium/calcium exchanger protein [Mus musculus]
gi|13925661|gb|AAK49407; Ca2+:Cation Antiporter (CaCA)
Family member PMID:11500563
Length = 415
Score = 64.1 bits (149), Expect = 1e-10
Identities = 47/150 (31%), Positives = 76/150 (50%), Gaps = 4/150 (2%)
Query: 193 VTFIGSIVWIAFFSYLMVWWANVAGSTAQVPPEVMGLTLLAAGTSVPDLITSVIVARKGF 252
V FI S+ WI+ + ++ G+ ++PP ++GLT+LA G SV DL+ V VA+ G
Sbjct: 260 VAFIMSVFWISTIAGELLNCLAALGTLLKLPPALLGLTVLAWGNSVGDLVADVAVAKAGR 319
Query: 253 GDMAVSSSVGSNIFDVTVGLPLPWLLYGLINSEP---VLVNSKGMVCSIVLLFAMLIFVI 309
MA++ +F++ VGL L+ N P L G+V + V L L+ +
Sbjct: 320 PAMAMAGCFAGPMFNMLVGLGSA-LVMQTANVYPDAYKLGFHVGIVIAFVFLLLSLMGSL 378
Query: 310 LSIACFKWKMNKGLGFTMFLLYFVFVAVSL 339
L I ++++ + G + LY F VSL
Sbjct: 379 LVITWSRFRVPRFWGICLVGLYVAFTFVSL 408
Score = 34.3 bits (75), Expect = 0.12
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Query: 229 LTLLAAGTSVPDLITSVIVARKGFGDMAVSS--SVGSNIFDVTVGLPLPWLLYGLINSEP 286
+TLLA G PD+ SV R G + S G+ + VG + I + P
Sbjct: 4 VTLLALGNGAPDVFASVAALRGGQYRTGFGAILSAGTFVSAFVVG-------FVAIYAAP 56
Query: 287 VLVNSKGMVCSIV--LLFAMLIF-VILSIACFKWKMNKGLGFTMFLLYFVF 334
V++ V ++ L+ A+ +F V LS F W+ +GF +F + FVF
Sbjct: 57 FPVDAASFVRDVLFYLIAALFLFYVYLSGEIFVWQAIGFVGFYIFFVGFVF 107
>At5g17860.1 68418.m02093 cation exchanger, putative (CAX7) contains
similarity to SWISS-PROT:Q9HC58 NKX3_HUMAN
Sodium/potassium/calcium exchanger 3 precursor {Homo
sapiens}; Ca2+:Cation Antiporter (CaCA) Family member
PMID:11500563
Length = 570
Score = 57.2 bits (132), Expect = 2e-08
Identities = 39/157 (24%), Positives = 77/157 (49%), Gaps = 5/157 (3%)
Query: 195 FIGSIVWIAFFSYLMVWWANVAGSTAQVPPEVMGLTLLAAGTSVPDLITSVIVARKGFGD 254
F S+ W + +V G+ + P V+GLT+LA G S+ DLI +V VA G D
Sbjct: 410 FTMSVTWTYMIAQELVSLLISLGNIFGISPSVLGLTVLAWGNSLGDLIANVTVAFHGGND 469
Query: 255 ---MAVSSSVGSNIFDVTVGLPLPWLLYGLINSEPVLV--NSKGMVCSIVLLFAMLIFVI 309
+A+S +F+ +GL +P ++ L V + + ++ ++ L L++ +
Sbjct: 470 GAQIALSGCYAGPLFNTVIGLGVPLVISSLAEYPGVYIIPSDNSLLETLGFLMVGLLWAL 529
Query: 310 LSIACFKWKMNKGLGFTMFLLYFVFVAVSLGLEYDYL 346
+ + K +++K +G + +Y F+++ L + L
Sbjct: 530 VIMPKKKMRLDKLVGGGLLAIYLCFLSLRLARVFGVL 566
Score = 44.8 bits (101), Expect = 9e-05
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 221 QVPPEVMGLTLLAAGTSVPDLITSVI-VARKGFGDMAVSSSVGSNIFDVTVGLPLPWLLY 279
++ P + G+TLL+ G PDL +SV+ R GD ++S +G F V + +
Sbjct: 136 KLSPTMAGVTLLSLGNGAPDLFSSVVSFTRSNNGDFGLNSILGGAFF---VSSFVVGTIC 192
Query: 280 GLINSEPVLVNSKGMVCSIVLLFAMLIFVILSIACFKWKMNKGLGF-TMFLLYFVFVAVS 338
LI S V ++ + +V L L + L I K + L + +++LLY F++VS
Sbjct: 193 VLIGSRDVAIDRNSFIRDVVFLLVALCCLGLIIFIGKVTIWVALCYLSIYLLYVGFLSVS 252
>At1g54115.1 68414.m06169 cation exchanger, putative
Length = 644
Score = 56.4 bits (130), Expect = 3e-08
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 8/151 (5%)
Query: 195 FIGSIVWIAFFSYLMVWWANVAGSTAQVPPEVMGLTLLAAGTSVPDLITSVIVARKGFGD 254
FI SIVW + +V G + P ++GLT+LA G S+ DL++++ ++ G GD
Sbjct: 485 FIMSIVWFYMIANELVALLVTFGGIYGINPSILGLTVLAWGNSMGDLVSNIALSMNG-GD 543
Query: 255 ---MAVSSSVGSNIFDVTVGLPLPWLLYGLINSEP---VLVNSKGMVCSIVLLFAMLIFV 308
+A+S +F+ VGL + L G + P ++ + ++ L LI+
Sbjct: 544 GVQIALSGCYAGPMFNTLVGLGMSMFL-GAWSKSPETYMIPEDNSLFYTLGFLIFGLIWS 602
Query: 309 ILSIACFKWKMNKGLGFTMFLLYFVFVAVSL 339
++ + + + NK +G + LY +FV L
Sbjct: 603 LVMLPRNEMRPNKVMGIGLITLYLIFVTFRL 633
Score = 36.3 bits (80), Expect = 0.031
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 7/117 (5%)
Query: 221 QVPPEVMGLTLLAAGTSVPDLITSVIV-ARKGFGDMAVSSSVGSNIFDVTVGLPLPWLLY 279
++PP V G+TLL G PD+ S+ G++ ++S +G +F V + + L
Sbjct: 171 RLPPTVAGVTLLPLGNGAPDVFASIAAFVGSDKGEVGLNSVLGGAVFVTCVVVGIVSL-- 228
Query: 280 GLINSEPVLVNSKGMVCSIVLLFAMLIFVILSIACFKWKMNKGLGFTMFLLYFVFVA 336
+ + V ++ K + L F + V L + K+ G+ F+ +VF A
Sbjct: 229 -CVADKEVKIDKKCFIRD--LSFFLFTLVALMVILMVGKVTVGIAIA-FVSIYVFYA 281
>At5g17850.1 68418.m02092 cation exchanger, putative (CAX8) similar
to sodium/calcium exchanger protein [Mus musculus]
gi|13925661|gb|AAK49407; Ca2+:Cation Antiporter (CaCA)
Family member PMID:11500563
Length = 559
Score = 44.8 bits (101), Expect = 9e-05
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 156 PSGFRKRLTYVLVAPIVFPL-WITLPDTR--TPRGKGLFPVT---FIGSIVWIAFFSYLM 209
P+ F + Y++ I L +I T+ TP K L P F+ S+ W + +
Sbjct: 357 PTSFEAGVVYLIGCLIGIALGFIAGATTKKLTPPKKWLLPWLAGGFVMSMTWSYISAQEL 416
Query: 210 VWWANVAGSTAQVPPEVMGLTLLAAGTSVPDLITSVIVARKGFGD---MAVSSSVGSNIF 266
V G V P ++GLT+LA G S+ DLIT++ +A + +AVS IF
Sbjct: 417 VALLTSLGYIFGVSPSILGLTVLAWGNSIGDLITNLTMALHDGNEGAQVAVSGCYAGPIF 476
Query: 267 DV--TVGLPL---PWLLYGL---INSEPVLVNSKG-MVCSIVLLFAML 305
+ +G+ L W Y L I ++P L+ S G +V +V F +L
Sbjct: 477 NTLFALGISLVGCAWEAYPLSIVIKTDPRLLESLGFLVAGLVWSFLVL 524
Score = 35.1 bits (77), Expect = 0.071
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 7/119 (5%)
Query: 224 PEVMGLTLLAAGTSVPDLITSVIV---ARKGFGDMAVSSSVGSNIFDVTVGLPLPWLLYG 280
P V G+TLL+ G PDL S++ KG D+ +++ VG + F V + ++
Sbjct: 129 PTVAGVTLLSLGNGAPDLFASLVSFMGESKGTYDVGLNTVVGGSGFVTCV---VVGIISI 185
Query: 281 LINSEPVLVNSKGMVCSIVLLFAMLIFVILSIACFKWKMNKGLGF-TMFLLYFVFVAVS 338
++ V + + I A + + L + K LGF +++ +Y FV +S
Sbjct: 186 SLHKRRVRIERAAFIRDICFFCAAIGSLALILVYGKINFWGALGFCSLYAVYVAFVVLS 244
>At2g34355.1 68415.m04205 nodulin-related contains 14 transmembrane
domains; supported by tandem duplication of nodulin
-related protein (TIGR_Ath1:At2g34350) [Arabidopsis
thaliana]
Length = 523
Score = 37.1 bits (82), Expect = 0.017
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 189 GLFPVTFIGSIVWIAFFSYLMVWWANVAGSTAQVPPEVMGLTLLAAGTSVPDLIT-SVIV 247
G + V F+G + W F ++ WA+V G A P +M L + AG S+P T +V+
Sbjct: 78 GPWVVVFVGLVQWFVGFFFI---WASVVGLIAPPPVPLMCLFVFLAGHSLPFFNTANVVT 134
Query: 248 ARKGF 252
A + F
Sbjct: 135 AARNF 139
>At3g14070.1 68416.m01777 cation exchanger, putative (CAX9) similar
to sodium/calcium exchanger protein [Mus musculus]
gi|13925661|gb|AAK49407; Ca2+:Cation Antiporter (CaCA)
Family member PMID:11500563
Length = 643
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 221 QVPPEVMGLTLLAAGTSVPDLITSVIV-ARKGFGDMAVSSSVGSNIF--DVTVGL 272
++PP V G+TLL G PD+ S+ G++ ++S +G +F V VG+
Sbjct: 172 RLPPTVAGVTLLPLGNGAPDVFASIAAFVGTDKGEVGLNSVLGGAVFVTSVVVGI 226
>At1g69270.1 68414.m07941 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 540
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 294 MVCSIVLLFAMLIFVILSIACFKWKMNKGLGFTMFLLYFVFVAVSLGLEYDYL 346
+V + V++F +L+ VIL I KWK N + VFV + + L Y+ +
Sbjct: 202 IVSASVIVFVLLVLVILFIYTRKWKRNSQVQVDEIKEIKVFVDIGIPLTYEII 254
>At1g23090.1 68414.m02887 sulfate transporter, putative similar to
sulfate transporter [Arabidopsis thaliana] GI:2285885;
contains Pfam profiles PF00916: Sulfate transporter
family, PF01740: STAS domain
Length = 631
Score = 32.3 bits (70), Expect = 0.50
Identities = 29/121 (23%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 225 EVMGLTLL-AAGTSVPDLITSVIVARKGFGDMAVSSSVGSNI-FDVTVGLPLPWLLYGLI 282
E++ + L+ G++ +T+ +R + A + + SNI VTV + L +L+
Sbjct: 347 EMIAIGLMNVVGSATSCYVTTGAFSRSAVNNNAGAKTAVSNIVMSVTVMVTLLFLM---- 402
Query: 283 NSEPVLVNSKGMVCSIVLLFAMLIFVILSIACFKWKMNKGLGFTMFLLYF--VFVAVSLG 340
P+ + +V +++ A++ + L AC WK++K M +F +F++V G
Sbjct: 403 ---PLFEYTPNVVLGAIIVTAVIGLIDLPAACHIWKIDKFDFLVMLCAFFGVIFLSVQNG 459
Query: 341 L 341
L
Sbjct: 460 L 460
>At3g09940.1 68416.m01190 monodehydroascorbate reductase, putative
similar to monodehydroascorbate reductase (NADH)
GB:JU0182 (Cucumis sativus)
Length = 441
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 246 IVARKGFGDMAVSSSVGSNIFDVTVGLPLPWLLYGLINSE 285
++ GF + +SS++ +N +VT+ P PWL++ +E
Sbjct: 169 VIIGGGFLGLEISSALRANNHEVTMVFPEPWLVHRFFTAE 208
>At1g30640.1 68414.m03747 protein kinase, putative contains protein
kinase domain, Pfam:PF00069
Length = 562
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 230 TLLAAGTSVPDLITSVIVARKGFGDMAVSSSVGSNIFDVTVGLP 273
TL + PD I ++ +KG+G S+G+ +F++ VG P
Sbjct: 318 TLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMFEMLVGFP 361
>At5g15410.2 68418.m01803 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC2) identical to
cyclic nucleotide-gated cation channel GI:3894399 from
[Arabidopsis thaliana]
Length = 593
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 266 FDVTVGLPLPWLLYGLINSEPVLVNSKGMVCSIVLLFAMLIFV--ILSIACFKWKMNKGL 323
FDV V LP+P ++ L+ + + ++ +I+LL + F+ I C +M K
Sbjct: 90 FDVIVILPVPQAVFWLVVPKLIREEKVKLIMTILLLIFLFQFLPKIYHCICLMRRMQKVT 149
Query: 324 GFTMFLLYFVF 334
G+ +++ F
Sbjct: 150 GYIFGTIWWGF 160
>At5g15410.1 68418.m01804 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC2) identical to
cyclic nucleotide-gated cation channel GI:3894399 from
[Arabidopsis thaliana]
Length = 726
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 266 FDVTVGLPLPWLLYGLINSEPVLVNSKGMVCSIVLLFAMLIFV--ILSIACFKWKMNKGL 323
FDV V LP+P ++ L+ + + ++ +I+LL + F+ I C +M K
Sbjct: 223 FDVIVILPVPQAVFWLVVPKLIREEKVKLIMTILLLIFLFQFLPKIYHCICLMRRMQKVT 282
Query: 324 GFTMFLLYFVF 334
G+ +++ F
Sbjct: 283 GYIFGTIWWGF 293
>At1g31820.1 68414.m03908 amino acid permease family protein weak
similarity to asc-type amino acid transporter 2 [Mus
musculus] GI:18148438; contains Pfam profile PF00324:
Amino acid permease
Length = 482
Score = 29.1 bits (62), Expect = 4.6
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 253 GDMAVSSSVGSNIFDVTVGLPLPWLLYGLINSEPVLVNSKGMVCSIVLLFAMLIFVILS- 311
GD+ SS G+N LPL +L++ ++ P ++G V + L A+L FVI
Sbjct: 20 GDVGGSSKEGNNSIQKVSMLPLVFLIFYEVSGGP--FGAEGSVNAAGPLLALLGFVIFPF 77
Query: 312 IACFKWKMNKGLGFTMFLL---YFVFVAVSLG 340
I C + TMF + + V+V+ +LG
Sbjct: 78 IWCIPEALITAEMSTMFPINGGFVVWVSSALG 109
>At1g21460.1 68414.m02683 nodulin MtN3 family protein contains
similarity to MTN3 (nodule development protein)
GB:Y08726 GI:1619601 from [Medicago truncatula]
Length = 247
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 276 WLLYGLINSEPVLVNSKGMVCSIVLLFAMLIFV 308
W +YGLI +P + G C++ L +L F+
Sbjct: 176 WFVYGLIGRDPFVAIPNGFGCALGTLQLILYFI 208
>At2g20470.1 68415.m02390 protein kinase, putative contains protein
kinase domain, Pfam:PF00069
Length = 596
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 230 TLLAAGTSVPDLITSVIVARKGFGDMAVSSSVGSNIFDVTVGLP 273
TL + PD I ++ +KG+G S+G+ ++++ VG P
Sbjct: 316 TLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 359
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.326 0.142 0.445
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,382,426
Number of Sequences: 28952
Number of extensions: 294974
Number of successful extensions: 910
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 892
Number of HSP's gapped (non-prelim): 21
length of query: 350
length of database: 12,070,560
effective HSP length: 82
effective length of query: 268
effective length of database: 9,696,496
effective search space: 2598660928
effective search space used: 2598660928
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 60 (28.3 bits)
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