GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001977-TA|BGIBMGA001977-PA|IPR004481|K+-dependent
Na+/Ca+ exchanger related-protein, IPR004837|Sodium/calcium exchanger
membrane region
         (254 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     26   0.92 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   3.7  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   6.5  

>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 26.2 bits (55), Expect = 0.92
 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 202 RWNQPVERAFKKLIYKNKVTRVRSTDQLMPTVSSPAHPLHAIQLV 246
           RWN   +   +   YKNK+  +   D L   +S  +H   AI+ +
Sbjct: 328 RWNSGYDMLNR--FYKNKIALLSCADSLKMKISLESHDWEAIEQI 370


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query: 216  YKNKVTRVRSTDQLMPTVSSPAHP 239
            Y+N +T+V  T  +M  + + AHP
Sbjct: 1755 YENFITQVHGTSHVMSGMVAKAHP 1778


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/31 (32%), Positives = 18/31 (58%)

Query: 78  FVPALDVIIERLEIRDDVAGATFMAAGGSAP 108
           F  AL  + ++ ++++D  GA    +GG AP
Sbjct: 182 FAAALRNLAKQADVKEDEPGAGGGGSGGGAP 212


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.328    0.140    0.432 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,016
Number of Sequences: 2123
Number of extensions: 9202
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 3
length of query: 254
length of database: 516,269
effective HSP length: 63
effective length of query: 191
effective length of database: 382,520
effective search space: 73061320
effective search space used: 73061320
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 47 (23.0 bits)