Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001976-TA|BGIBMGA001976-PA|IPR002931|Transglutaminase-
like, IPR008958|Transglutaminase-like, C-terminal,
IPR013807|Transglutaminase, C-terminal
(626 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42288| Best HMM Match : Transglut_N (HMM E-Value=9.2e-34) 261 1e-69
SB_57180| Best HMM Match : Transglut_core (HMM E-Value=1.4e-14) 135 9e-32
SB_41551| Best HMM Match : Transglut_N (HMM E-Value=3.1e-25) 75 1e-13
SB_24908| Best HMM Match : Transglut_C (HMM E-Value=0.028) 44 5e-04
SB_22958| Best HMM Match : RasGAP_C (HMM E-Value=0.23) 31 2.1
SB_18800| Best HMM Match : Cytomega_UL20A (HMM E-Value=7.7) 30 4.9
SB_59088| Best HMM Match : AlaDh_PNT_N (HMM E-Value=4.3e-07) 30 6.4
SB_45079| Best HMM Match : RRM_1 (HMM E-Value=0.0027) 30 6.4
SB_22100| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.5
>SB_42288| Best HMM Match : Transglut_N (HMM E-Value=9.2e-34)
Length = 686
Score = 261 bits (640), Expect = 1e-69
Identities = 167/485 (34%), Positives = 256/485 (52%), Gaps = 46/485 (9%)
Query: 80 DDQTYMEDCTLLQEYVLNDVGKVWVGPIKTTRGKPWFYGQFDAVVLPACMFMLDKAEFPF 139
DD YMED + QEYV+N+ G++WVG + G+PW +GQF+ VVL +++LDKAE
Sbjct: 206 DDDVYMEDESHRQEYVMNETGRIWVGSSRNNYGRPWNFGQFEDVVLENALYLLDKAELGI 265
Query: 140 NQRGDPVKVARVISKIVNSND-DDGVLAGRWDGQY-DDGTAPSEWTGSVEILAQFLETQQ 197
+ R PV ++RVIS++ N ND D G+L GRW +Y + T P GSV+IL +F +
Sbjct: 266 SARSSPVAISRVISQMANHNDRDGGILYGRWTEKYPKNSTKPLGLVGSVKILEKFDRRKY 325
Query: 198 TVPYGQCWVFAGVVTAVCRALGIPSRVVSNLVSAHDANSTLTVDKYYSENMEEMESVDSI 257
TV YGQCWVF+G+VT +CRALGIP+R V+N SAHD +S++T+D ++ E M ++
Sbjct: 326 TVRYGQCWVFSGLVTTLCRALGIPTRSVTNFKSAHDTDSSMTIDFHFDEAGTSMFGMNLS 385
Query: 258 WNYHVWNDVWM--ARPDLPT-GYGGWQAIDATPQETS----------QGQYQCGPAPLEA 304
++ V +P T Y + + A Q T+ G ++CGP P++A
Sbjct: 386 LRDQIFPLVTTDGRKPGQVTLRYPSYYPV-APEQSTTCYQKPARLIKIGVFRCGPCPVKA 444
Query: 305 IKQGVIGLSYDVDFMLASVNADLMRWRKDPEAETGFSMVDTNNYHIGRMVLTKKPFVFDP 364
+K G + + YD F+ A VN D + W + E +D + IG+ + TK
Sbjct: 445 VKNGEVYVPYDTKFVFAEVNGDRVYWDVHSDGEMEVYRIDKQS--IGKNISTK------A 496
Query: 365 IGDEDREDITSQYKYKEGTASERLALMNGVRYSER-------AKRYYSVVSNLQT----- 412
+G ++REDIT YK+ EG+ +ER A+ +YS R KR V L
Sbjct: 497 VGSDEREDITHLYKFPEGSHAEREAVHLAHKYSSRRDEDIYEEKRVNDVTFALDVKDDVI 556
Query: 413 -----DVTFKLRDIDL----VSIGKDFKVTIDIKNVSDQGRNIKASLSASSFYYNGVKFD 463
DV K+ + V IG DF V + + N S + R +K +++A S +Y G
Sbjct: 557 IGSDFDVVLKMTNTSKEKHDVIIGSDFDVVLKMTNTSKEKRTVKIAMTAKSTFYTGRSNY 616
Query: 464 IIKKIEGKLYVGPQKNEEVSLVVKVEDYL-PKLVEYGNIKISAMAIVDETKQSWADDDDF 522
+ ++ ++ + K+E + L +K DY+ PK + I A V +T Q +A +
Sbjct: 617 NVTNLKDEVELEANKDETIILAIKQADYVRPKQKCDEPMNIFVRAHVQQTDQRYASMETA 676
Query: 523 QILKP 527
+ KP
Sbjct: 677 TLKKP 681
Score = 37.5 bits (83), Expect = 0.032
Identities = 21/80 (26%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 2 ETQGSVFPRRDAVAD-KHSWTAKLIDVQENTLSFEVSTPVTLPVGTWSLRVVTRQKNS-- 58
+++G++ ++ A + SW+ ++ V+ +++S +V +P T P+G + L V T K +
Sbjct: 84 QSKGTIVRIKEHTATTRGSWSMEVTSVKGDSVSVKVLSPATAPIGKYQLYVETEVKGAKD 143
Query: 59 SAREIY-DFDQDIYILFNPW 77
+ I+ I +LFN W
Sbjct: 144 GKKLIFRSMQAGIIVLFNAW 163
>SB_57180| Best HMM Match : Transglut_core (HMM E-Value=1.4e-14)
Length = 422
Score = 135 bits (327), Expect = 9e-32
Identities = 72/173 (41%), Positives = 99/173 (57%), Gaps = 7/173 (4%)
Query: 156 VNSNDDDG-VLAGRWDGQYDDGTAPSEWTGSVEILAQFLETQQTVPYGQCWVFAGVVTAV 214
VNSND+DG +L GRW +Y DGT P WTGSV+IL +++ TV YGQCWVF+GVVT +
Sbjct: 249 VNSNDEDGGILEGRWAEEYPDGTFPWTWTGSVKILEEYVRKNSTVKYGQCWVFSGVVTTL 308
Query: 215 CRALGIPSRVVSNLVSAHDANSTLTVDKYYSENMEEMESVDSIW---NYHVWN--DVWMA 269
RALGIP+R V+N SAHD + +LT+D ++ E M + Y N D +
Sbjct: 309 SRALGIPTRSVTNFDSAHDTDGSLTIDTHFDEEGIIMCGTSRTFRDLTYRPLNLVDGRLT 368
Query: 270 RPDLPTGYGGW-QAIDATPQETSQGQYQCGPAPLEAIKQGVIGLSYDVDFMLA 321
P + G+ D G ++CGP PL A+K G + + +D F+ A
Sbjct: 369 MPPHRSAVMGYFDVCDMDISMCVTGIFRCGPCPLTAVKNGDVHIPHDTGFVFA 421
>SB_41551| Best HMM Match : Transglut_N (HMM E-Value=3.1e-25)
Length = 202
Score = 75.4 bits (177), Expect = 1e-13
Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 2 ETQGSVFPRRDAVADKH-SWTAKLIDVQENTLSFEVSTPVTLPVGTWSLRVVTRQKNSS- 59
+++G++ RD+ SW ++ V + +S +V++P +G + L V T K+
Sbjct: 84 QSKGTLLRLRDSTETAPWSWGMQITRVDGDRVSMQVTSPADAAIGRYELLVETELKDPKP 143
Query: 60 -AREIYDFDQDIYILFNPWNPDDQTYMEDCTLLQEYVLNDVGKVWVGPIKTTRGKPWFYG 118
A +DI +LFN W DD YMED + +EYVLND G++WVG +R PW +G
Sbjct: 144 DAELKRKKFKDIIVLFNAWCKDDAVYMEDQSHREEYVLNDYGRIWVGHWSNSR--PWKFG 201
Query: 119 Q 119
Q
Sbjct: 202 Q 202
>SB_24908| Best HMM Match : Transglut_C (HMM E-Value=0.028)
Length = 202
Score = 43.6 bits (98), Expect = 5e-04
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 386 ERLALMNGVRYSERAKRYYSVVSNLQTDVTFKLRDIDLVSIGKDFKVTIDIKNVSDQGRN 445
ER A+ +R + Y S+V DVTF V IG DF V + N + R+
Sbjct: 5 ERKAVERALR-ARGQHDYPSIVK--PKDVTFSYEVQSDVVIGSDFNVIVKANNKGSEKRS 61
Query: 446 IKASLSASSFYYNGVK-FDIIKKIEGKLYVGP----QKNEEVSLVVKVEDYL 492
+ S++ S Y G D+ K + ++ + P ++E+ L+VK +DY+
Sbjct: 62 VDISITVKSAMYTGRNTHDVAKLLRQRVELEPYHPYMPDKEIQLIVKAQDYV 113
>SB_22958| Best HMM Match : RasGAP_C (HMM E-Value=0.23)
Length = 1178
Score = 31.5 bits (68), Expect = 2.1
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 427 GKDFKVTIDIKNVSDQGRNIKASLSASSFYYNGVKFDIIKKIEGKLYVGPQKNEEVSLVV 486
G + ++ I G S S + F Y G +++I K I +Y GPQ N S+ +
Sbjct: 579 GSQYNISQSITIFVYGGSQYNISKSITIFVYGGSQYNISKSITISVYGGPQYNISQSITI 638
Query: 487 KV 488
V
Sbjct: 639 FV 640
>SB_18800| Best HMM Match : Cytomega_UL20A (HMM E-Value=7.7)
Length = 140
Score = 30.3 bits (65), Expect = 4.9
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 155 IVNSNDDDGVLAGRWDGQYDD 175
+V S+DDDGV A R D YDD
Sbjct: 7 LVVSDDDDGVCASRNDSDYDD 27
>SB_59088| Best HMM Match : AlaDh_PNT_N (HMM E-Value=4.3e-07)
Length = 217
Score = 29.9 bits (64), Expect = 6.4
Identities = 18/62 (29%), Positives = 27/62 (43%)
Query: 380 KEGTASERLALMNGVRYSERAKRYYSVVSNLQTDVTFKLRDIDLVSIGKDFKVTIDIKNV 439
KE +A+ER ++ K+ + VV + K D D V+ G K D+ N
Sbjct: 152 KEMSANERRVAISPEAVKNYTKQGFKVVIEEGAGLDAKFMDADYVAAGAQIKSVKDVYNT 211
Query: 440 SD 441
SD
Sbjct: 212 SD 213
>SB_45079| Best HMM Match : RRM_1 (HMM E-Value=0.0027)
Length = 253
Score = 29.9 bits (64), Expect = 6.4
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 9 PRRDAVADKHSWTAKLIDVQENTLSFEVSTPVTLPVGTWSLRVVTRQKNSSAREIYDFD 67
PRR ++L+ V E+T + + + P+ + LR++TR SS+ +I F+
Sbjct: 194 PRRGGRGGSPRQRSRLLAVTEDTKTVQAALPILVHRDPRYLRIITRDACSSSNDIVYFN 252
>SB_22100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 571
Score = 29.5 bits (63), Expect = 8.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 340 FSMVDTNNYHIGRMVLTKKPFVFDPIGDEDREDITSQYKYKE 381
+S+ D NY +GR+ L +P F P G + R + + K+
Sbjct: 313 YSIQDRINYELGRVDLGAEPVGFGPFGQKTRRAVLASKSPKQ 354
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.134 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,540,646
Number of Sequences: 59808
Number of extensions: 873129
Number of successful extensions: 1955
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1937
Number of HSP's gapped (non-prelim): 13
length of query: 626
length of database: 16,821,457
effective HSP length: 86
effective length of query: 540
effective length of database: 11,677,969
effective search space: 6306103260
effective search space used: 6306103260
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
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