Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001975-TA|BGIBMGA001975-PA|undefined
(163 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 29 0.34
SPCC417.05c |chr2|cfh2|chitin synthase regulatory factor |Schizo... 29 0.45
SPAC664.01c |swi6|SPAC824.10c|chromodomain protein Swi6|Schizosa... 27 1.4
SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|c... 27 1.8
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 27 1.8
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 27 1.8
SPBC947.08c |||histone promoter control protein Hpc2 |Schizosacc... 26 3.2
SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr 3... 26 3.2
SPAC1142.07c |vps32|snf7|vacuolar sorting protein Vps32|Schizosa... 25 4.2
SPAC1610.01 ||SPAC17A5.17|conserved fungal protein|Schizosacchar... 25 4.2
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 25 4.2
SPAC6B12.09 |trm10||tRNA m|Schizosaccharomyces pombe|chr 1|||Manual 25 4.2
SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyce... 25 4.2
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 25 5.6
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha... 25 5.6
SPCC18.12c |||rRNA processing protein|Schizosaccharomyces pombe|... 25 5.6
SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces pom... 25 5.6
SPAC57A7.13 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 25 7.4
SPAC17G6.17 |pof8||F-box protein Pof8|Schizosaccharomyces pombe|... 25 7.4
SPCC23B6.02c |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 24 9.7
SPAC1420.01c ||SPAC56E4.08c|DUF1752 family protein|Schizosacchar... 24 9.7
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 24 9.7
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 29.1 bits (62), Expect = 0.34
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 70 KTSASVQYEETKRDSCSVP-KRKKNIQPL--PIKSKAKSLQNQNIIEAAFPISVPPKIIR 126
KT + + + R++C R +I P+ S SL + ++++ PI + PK++
Sbjct: 259 KTPPRLSFADENRENCRTDIYRSDSIHEYEEPLTSSITSLDSPHVLDENAPIPLLPKVVS 318
Query: 127 KRSPRTRKV 135
PR V
Sbjct: 319 LPDPRFTNV 327
>SPCC417.05c |chr2|cfh2|chitin synthase regulatory factor
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 512
Score = 28.7 bits (61), Expect = 0.45
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 70 KTSASVQYEETK-RDSCSVPKRKKNIQPLPIK 100
KTS ++ EE K R+S S+PK+KK + L K
Sbjct: 470 KTSITISNEERKSRNSESLPKKKKRLSMLSFK 501
>SPAC664.01c |swi6|SPAC824.10c|chromodomain protein
Swi6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 27.1 bits (57), Expect = 1.4
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 126 RKRSPRTRKVETPRKTPTLRSHKGLENKHSKLKEQIVE 163
RKR+ R +K E K P+ +S K E+KH K + +E
Sbjct: 144 RKRTARPKKPEA--KEPSPKSRKTDEDKHDKDSNEKIE 179
>SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 26.6 bits (56), Expect = 1.8
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 27 DKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPE--SKLDD 64
+KL D V+D +TL D ++SKL TV + +++DD
Sbjct: 443 NKLCDQVSDWDRTLVDNGALISKLYTETVEAEQMSNRIDD 482
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 26.6 bits (56), Expect = 1.8
Identities = 16/76 (21%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 92 KNIQPLPIKSKAKSLQNQNIIEAAFPIS----VPPKIIRKRSPRTRKVETPRKTPTLRSH 147
K I LPI K+ + +I+ P+S + K+ R++ +K++ +
Sbjct: 851 KRISFLPIHQKSAEAASVDILPKVLPVSKTSDLTDKVNRRQRKNDKKIKNKIQVKLSSIL 910
Query: 148 KGLENKHSKLKEQIVE 163
+ L +++ K K+ I++
Sbjct: 911 EMLRSRYKKFKKPIID 926
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase
kinase Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 26.6 bits (56), Expect = 1.8
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 45 TMVSKLSQNTVI-GPESKLDDWRVPFKTSASVQYEETKRDSCSVPKRKKNIQPLPIKS 101
++ S +S N +I P K DD+ ++ +S + +S +VP + KN+ P +S
Sbjct: 161 SLQSSISSNRIIKSPGIKEDDYMHRGRSISSPMIDVEHINSTAVPSKTKNLPEKPKRS 218
>SPBC947.08c |||histone promoter control protein Hpc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 338
Score = 25.8 bits (54), Expect = 3.2
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 10/79 (12%)
Query: 78 EETKRDSCSVPKRKKNIQPLPIKSKAKSLQNQNIIEAAFPISVPPKIIRKRSPRTRKVET 137
+E KR++ VPK + KSK K+ + + SVP + + + + K+ET
Sbjct: 195 KEAKRENAKVPKDVSKKEAKTTKSKEKATKKTS-------SSVPKQSTGENTKKAVKLET 247
Query: 138 P-RKTPTLRSHKGLENKHS 155
P TP + E KHS
Sbjct: 248 PLTSTPPIPPLS--EPKHS 264
>SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 378
Score = 25.8 bits (54), Expect = 3.2
Identities = 14/67 (20%), Positives = 30/67 (44%)
Query: 71 TSASVQYEETKRDSCSVPKRKKNIQPLPIKSKAKSLQNQNIIEAAFPISVPPKIIRKRSP 130
T V+ E K S +VP + +P+P + ++ +++ ++ K+I + +P
Sbjct: 305 TGVPVEEESHKATSDAVPPAEAKPEPVPASAAERAPTSESTTVPETIVASTTKVISEPAP 364
Query: 131 RTRKVET 137
R T
Sbjct: 365 RVTTAAT 371
>SPAC1142.07c |vps32|snf7|vacuolar sorting protein
Vps32|Schizosaccharomyces pombe|chr 1|||Manual
Length = 222
Score = 25.4 bits (53), Expect = 4.2
Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 25 KLDKLQDDVNDHGKTLGDLKTMVS-KLSQNTVIGPE---SKLDDWRVPFKTSASVQYEET 80
K+D++ D + D ++ TM+S + N I + ++LD+ + S + E+
Sbjct: 122 KVDQIMDKIRDQQTISEEISTMISTPVGLNAEIDEDELANELDELQQMELDSKMLGAEKP 181
Query: 81 KRDSCSVPKRKKNIQPLPIKSKAKSLQNQ 109
+ +VP ++ LP SK + L +
Sbjct: 182 PVHTPAVPAVPSQVKDLPSISKPQELDEE 210
>SPAC1610.01 ||SPAC17A5.17|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 217
Score = 25.4 bits (53), Expect = 4.2
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 21 HFEKKLDKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESKLDDWRVPFKT 71
+FE+K + ++ LG L T++ SQ+ ++ E + W++P++T
Sbjct: 30 YFEEKTVPYKIRSDEESFPLGKLITLLVT-SQSFILFDEEQNSGWKIPYET 79
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 25.4 bits (53), Expect = 4.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 102 KAKSLQNQNIIEAAFPISVPPKIIRKRSPRTRKVETPRK 140
K K QN N EAA P +P ++ + + R+ + K
Sbjct: 154 KGKKAQNNNESEAAAPPEIPEVRVKTKKEKEREKKEREK 192
>SPAC6B12.09 |trm10||tRNA m|Schizosaccharomyces pombe|chr 1|||Manual
Length = 304
Score = 25.4 bits (53), Expect = 4.2
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 70 KTSASVQYEETKRDSCSVPKRKKNIQPLPIKSKAKSLQNQNIIEAAFPISVPPKIIRKRS 129
K + + ++T V K + QP+ KS K L+ Q +A +R+
Sbjct: 4 KDALDIGKDDTNTSEADVSKNETQEQPVLSKSALKRLKRQQEWDAGREKRAE---MRREK 60
Query: 130 PRTRKVETPRK 140
R RK E RK
Sbjct: 61 KRLRKEERKRK 71
>SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 210
Score = 25.4 bits (53), Expect = 4.2
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 24 KKLDKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESKLD 63
+K++KLQD++ D+ G+L ++ + + + E +LD
Sbjct: 126 EKIEKLQDEIQDYMDAAGELNEVLGQ-NMTDINVDEEELD 164
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 25.0 bits (52), Expect = 5.6
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 73 ASVQYEETKRDSCSVPKRKKNIQPLPIKSKAKSLQNQNI 111
+ + YE+ K+D P+ KN+ P + SL I
Sbjct: 370 SKINYEDFKKDFYVEPEELKNLSPAEVDELRASLDGIKI 408
>SPAC458.03 |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 868
Score = 25.0 bits (52), Expect = 5.6
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 6 ARHTDALQRIMISFKHFEKKLDKLQDDVNDHGKTLGDLKTMVSKLS 51
A++ + L + ++ +LD L DD+ HG + ++ + S +S
Sbjct: 361 AKYLNNLSKSLMFSNAISCRLDSLDDDIRMHGMIMAEVISTYSGVS 406
>SPCC18.12c |||rRNA processing protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 260
Score = 25.0 bits (52), Expect = 5.6
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 89 KRKKNIQPLPIKSKAKSLQNQNIIEAAFPISVPPKI-IRKRSPRTRK 134
KRK P P+ K +S +N E P+++ + RK+ R RK
Sbjct: 214 KRKGPKGPNPLSIKKRSSKNHTTDEPTLPVNIIGDVGERKKHRRKRK 260
>SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 264
Score = 25.0 bits (52), Expect = 5.6
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 3 LQRARHTDALQRIMISFKHFEKKLDKLQDDVNDHGKTLGDLKTMVSKL 50
LQ+ L+ I S+K E+K + L DD K + L+T +KL
Sbjct: 78 LQQENKDQELKNIEESYKKLEEKTEHLSDDNVSLEKRVEYLETENTKL 125
>SPAC57A7.13 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 565
Score = 24.6 bits (51), Expect = 7.4
Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 1/85 (1%)
Query: 37 GKTLGDLKTMVSKLSQNTVIGPESKLDDWRVPFKTSASVQYEETKRDSCSVPKRKKNIQP 96
G TL K V + +I ++ W+ P KT V ++ S VP+ Q
Sbjct: 278 GFTLASRKVSVDYIHDGVLIPAYTESARWQFPTKTGYLVYWDPELYCSIYVPEGIDTDQF 337
Query: 97 LPIKSKAKSLQNQNIIEAAFPISVP 121
PI+ K + + + + I VP
Sbjct: 338 KPIEVNKKPKKEKRARSSNY-IDVP 361
>SPAC17G6.17 |pof8||F-box protein Pof8|Schizosaccharomyces pombe|chr
1|||Manual
Length = 402
Score = 24.6 bits (51), Expect = 7.4
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 7/96 (7%)
Query: 70 KTSASVQYEETKRDSCSVPKRKKNIQPLPIKSKAKSLQNQNIIEAAFPISVPPKIIRKRS 129
KTS + + E+ + ++ R KN+ PL KS SL + I+ P I R
Sbjct: 276 KTSQTDKDEDNLDFTKNLLTRIKNLHPLTNKSTIHSLLSYVFSRQTQNIACEPMYIDYRK 335
Query: 130 PRTRKV---ETPRKTPT----LRSHKGLENKHSKLK 158
T + +TP T R+ + +N H ++
Sbjct: 336 DETEAIIRWKTPLHAETCINAFRTQERKQNSHDDIR 371
>SPCC23B6.02c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 139
Score = 24.2 bits (50), Expect = 9.7
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 50 LSQNTVIGPESKLDDWRVPFKTSASVQYEETKRDSCSVPKRKKNIQPLPIKSKAK 104
L +T I E+KL K A++ +S + K+KKN + K+K K
Sbjct: 21 LDSSTAIENETKLSVKEKVAKEIANIALRSGGSESNGISKKKKNKKQTSKKAKDK 75
>SPAC1420.01c ||SPAC56E4.08c|DUF1752 family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 24.2 bits (50), Expect = 9.7
Identities = 19/86 (22%), Positives = 33/86 (38%)
Query: 72 SASVQYEETKRDSCSVPKRKKNIQPLPIKSKAKSLQNQNIIEAAFPISVPPKIIRKRSPR 131
S S T + + S K + S+AK L+ + + + IIR PR
Sbjct: 258 SLSTNTSSTAQKNKSRKPTKSFSDAVAAASRAKELEKEKLSKVTVTPDDSTSIIRGFDPR 317
Query: 132 TRKVETPRKTPTLRSHKGLENKHSKL 157
+ T + +SH ++K +L
Sbjct: 318 LPVLSTKNVSHEEKSHSVQDDKSKQL 343
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 24.2 bits (50), Expect = 9.7
Identities = 16/60 (26%), Positives = 26/60 (43%)
Query: 75 VQYEETKRDSCSVPKRKKNIQPLPIKSKAKSLQNQNIIEAAFPISVPPKIIRKRSPRTRK 134
+ EET D S+ K N P+ K+ ++QN +E K +RK + +K
Sbjct: 248 IDQEETSSDDESLSKEIVNSNPIMCMVCNKNFRSQNQLENHENSKKHKKNLRKMNQEIKK 307
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.129 0.359
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 742,061
Number of Sequences: 5004
Number of extensions: 30076
Number of successful extensions: 95
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 83
Number of HSP's gapped (non-prelim): 23
length of query: 163
length of database: 2,362,478
effective HSP length: 68
effective length of query: 95
effective length of database: 2,022,206
effective search space: 192109570
effective search space used: 192109570
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 50 (24.2 bits)
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