Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001975-TA|BGIBMGA001975-PA|undefined
(163 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_1178 + 10131844-10131993,10132103-10132171,10132446-101324... 29 1.4
03_05_0435 - 24259864-24260206,24260302-24260467,24261175-242612... 29 1.4
12_02_0879 + 23960084-23961551,23961796-23962184 29 1.8
10_07_0108 - 12942031-12942048,12942167-12942357,12944659-12945307 28 3.2
01_06_0076 - 26206591-26206796,26209098-26209746 28 3.2
10_08_0452 - 18038182-18038253,18038338-18038415,18038502-180385... 28 4.2
09_03_0020 - 11594806-11595168 28 4.2
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 28 4.2
02_04_0391 + 22576839-22577387 28 4.2
10_08_0506 + 18390892-18391373,18392699-18392798,18393152-183934... 27 5.6
06_03_1223 - 28526869-28527192,28527515-28527634,28527742-285278... 27 5.6
04_04_1390 - 33184233-33184478,33184601-33184705,33184783-331848... 27 5.6
01_07_0248 + 42261373-42261609,42261733-42261905,42261986-422620... 27 5.6
01_04_0124 + 16359695-16359734,16360217-16360453,16361133-163621... 27 5.6
12_01_0359 + 2736797-2737050,2737801-2738153,2738583-2738821,273... 27 7.4
10_02_0167 - 6100676-6102111,6102174-6102708,6102967-6103975,610... 27 7.4
08_01_0563 - 4993428-4993751,4995478-4995675 27 7.4
08_01_0549 + 4811706-4811903,4813631-4813954 27 7.4
12_02_1159 + 26585042-26585441,26585520-26585608,26585670-265857... 27 9.7
08_02_0187 - 13978194-13979093,13980332-13980679 27 9.7
02_02_0571 - 11664292-11664809,11664900-11665750,11665837-11666468 27 9.7
>06_01_1178 +
10131844-10131993,10132103-10132171,10132446-10132451,
10132571-10132930,10133983-10134201,10134905-10135054
Length = 317
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 11 ALQRIMISFKHFEKKLDKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESKLDDWRVPFK 70
+L+++ K KK++ LQ DV++ +G L + K+S+N +L D +P
Sbjct: 204 SLEKLEWEVKTSNKKVEDLQGDVSNMEFEIGSLMALFEKISENV----SGELQDGSLPSS 259
Query: 71 TSASVQYEETKRDSCSVPK 89
++ D V K
Sbjct: 260 FELEALQSTSEIDKIEVEK 278
>03_05_0435 -
24259864-24260206,24260302-24260467,24261175-24261241,
24261553-24261648,24261718-24261898,24262252-24262323,
24262393-24262505,24262596-24262817,24263262-24263910,
24264118-24264206,24265932-24266015,24266219-24266358,
24266522-24266573
Length = 757
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 106 LQNQNIIEAAFPISVPPKIIRKRSPRTRKVETPRKTPTLRSHK 148
L +N IE+ P++ PK+IR P E TP HK
Sbjct: 505 LSTRNRIESRNPLAFAPKVIRTCGPGLEFGEDSNATPASSRHK 547
>12_02_0879 + 23960084-23961551,23961796-23962184
Length = 618
Score = 29.1 bits (62), Expect = 1.8
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 8/114 (7%)
Query: 27 DKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESKLDDWRVPFKTSASVQYEETKRDSCS 86
D VN +T D K V +++N + + K ++ P K S S+ S
Sbjct: 378 DAPSPSVNSEKQT--DRKMTVMNVAKNARVW-QKKEEEKISPVKLSRSINLSSKSLLSIK 434
Query: 87 VPKRKKNIQPLPIKSKAKSLQNQNIIEAAFPISVPPKIIRKRSPRTRKVETPRK 140
+ KK +KS K +N + V K ++ SP+ RKVE +K
Sbjct: 435 MRAVKKEKPASLVKSNKKVYGAENAVA-----DVKEKNLKSASPKVRKVEVSKK 483
>10_07_0108 - 12942031-12942048,12942167-12942357,12944659-12945307
Length = 285
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 42 DLKTMVSKLSQNTVIGPESKLDDWRVPFKTSASVQYEETKRDSCSVPKRKKNIQPLPIKS 101
DL+ M+ + + G L++W+ K S + Y+ETK + ++ L +K+
Sbjct: 64 DLEDMLRHVEPEVLAGRSRGLENWQALEKASKDLLYDETKGCDKDFTVLRSVLELLRLKA 123
Query: 102 K 102
K
Sbjct: 124 K 124
>01_06_0076 - 26206591-26206796,26209098-26209746
Length = 284
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 42 DLKTMVSKLSQNTVIGPESKLDDWRVPFKTSASVQYEETKRDSCSVPKRKKNIQPLPIKS 101
DL+ M+ + + G L++W+ K S + Y+ETK + ++ L +K+
Sbjct: 64 DLEDMLRHVEPEVLAGRSRGLENWQALEKASKDLLYDETKGYDKDFTVLRSVLELLRLKA 123
Query: 102 K 102
K
Sbjct: 124 K 124
>10_08_0452 -
18038182-18038253,18038338-18038415,18038502-18038579,
18039112-18039168,18039276-18039349,18039424-18039495,
18039609-18039670,18039861-18039962,18040378-18040490,
18040809-18040940,18041156-18041243,18041617-18041711,
18041793-18042023,18042567-18042680,18042765-18042866,
18043091-18043207,18043301-18044146
Length = 810
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 49 KLSQNTVIGPESKLDDWRVPFKTSASVQYEETKRDSCSVPKRKKNIQPLPIKSKAKSLQN 108
K S++ G + + + P K +TK + V K K+ P P K+KA + ++
Sbjct: 87 KRSESVAAGAKPEAKEKPSPKKPKTLGAKSDTKSSAEGVEKEKRR-SPSPTKAKALASES 145
Query: 109 QNIIEAAFP 117
Q+I + + P
Sbjct: 146 QDIKKPSSP 154
>09_03_0020 - 11594806-11595168
Length = 120
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 42 DLKTMVSKLSQNTVIGPESKLDDWRVPFKTSASVQYEETK 81
DL+ M+ + + G L++W+ K S + Y+ETK
Sbjct: 64 DLEDMLRHVEPEVLAGRSRGLENWQALEKASKDLLYDETK 103
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 27.9 bits (59), Expect = 4.2
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 103 AKSLQNQNIIEAAFPISVPPKIIRKRSPRTRKVETPRKTP 142
A+ Q + A P P R+RSP +R+VE+PR P
Sbjct: 245 AEKATKQQPRKPASPQRKPAPSPRRRSPPSRRVESPRCRP 284
>02_04_0391 + 22576839-22577387
Length = 182
Score = 27.9 bits (59), Expect = 4.2
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 90 RKKNIQPLPIKSKAKSLQNQNIIEAAFPISVPPKIIRKRSPRTRKVETPRKTPTL 144
++K+++ P + +Q N E + PP ++ R P T ETP +P+L
Sbjct: 49 KQKHVEIQPTNKLEQLIQPTNEHEQQQLLQPPPSVL-VREPETAGPETPHPSPSL 102
>10_08_0506 +
18390892-18391373,18392699-18392798,18393152-18393485,
18393756-18393868,18394437-18394565,18394746-18394839,
18394942-18395025,18395265-18395896,18396662-18396951,
18397098-18397242,18397876-18397973,18398075-18398156,
18398607-18398612,18398845-18398928
Length = 890
Score = 27.5 bits (58), Expect = 5.6
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 20 KHFEKKLDKLQDDVNDH-GKTLGDLKTMVSKLSQNTVIGPESKLDDWRVPFKTSASVQYE 78
K + K+ +L+D D LG L +V K S N V +L RVP S + Q E
Sbjct: 718 KAHQVKIKQLRDHELDFLVAILGLLVNLVEKDSLNRV-----RLSSARVPVDLSQNPQSE 772
Query: 79 ETKRD 83
ET+RD
Sbjct: 773 ETQRD 777
>06_03_1223 -
28526869-28527192,28527515-28527634,28527742-28527816,
28527905-28527964,28528271-28528370,28528664-28529148,
28529243-28529437,28529532-28529762,28529851-28529967,
28530247-28530330,28530755-28530893,28530939-28531090
Length = 693
Score = 27.5 bits (58), Expect = 5.6
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 6 ARHTDALQRIMISFKHFEKKLDKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESKLDDW 65
A+ + Q ++IS E + KL+ D+ND L L+ ++L++N E+ ++
Sbjct: 159 AKLPNKAQELIISIASLENTVSKLEKDLNDLCYQLCHLRNN-TRLAENNSRYLETLAEEN 217
Query: 66 RVPFKTSASVQYEETKRDSCS 86
S S+QY+ C+
Sbjct: 218 NSRGLLSTSLQYQPPSTCKCT 238
>04_04_1390 -
33184233-33184478,33184601-33184705,33184783-33184890,
33184967-33185101,33185263-33185363,33185495-33185564,
33185642-33185758,33186001-33186138,33186371-33186439,
33186556-33186645,33186758-33186940,33187020-33187052
Length = 464
Score = 27.5 bits (58), Expect = 5.6
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 9 TDALQRIMISFKHFEKKLDKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESKLDD 64
T+AL R+ + + E KLD+L + + K + D +T ++ LS+ + G L D
Sbjct: 157 TEALVRVCVVNSNLEVKLDELVNPL----KAVADYRTSITGLSKKDLKGVTCSLVD 208
>01_07_0248 + 42261373-42261609,42261733-42261905,42261986-42262058,
42262148-42262282,42262352-42262562,42262886-42263034,
42263169-42263267,42263821-42263989,42264176-42264308,
42264600-42264694,42264774-42264882,42265136-42265295,
42265433-42265594,42265814-42265985,42266254-42266402,
42266914-42266951,42267779-42267839,42267913-42268155,
42268233-42268315,42269521-42269609,42270449-42270495,
42270576-42270656,42270737-42270899,42271077-42271267,
42271691-42271762
Length = 1097
Score = 27.5 bits (58), Expect = 5.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 117 PISVPPKIIRKRSPRTRKVETPRKTP 142
P P RKR+P R++E+PR+ P
Sbjct: 1013 PRRKPASPPRKRTPPNRRIESPRRQP 1038
>01_04_0124 +
16359695-16359734,16360217-16360453,16361133-16362104,
16362211-16362398,16362564-16363942,16364024-16365047,
16365171-16365566,16367484-16367999,16368085-16368226,
16369409-16369553,16371351-16371432,16371851-16371895,
16372018-16372140
Length = 1762
Score = 27.5 bits (58), Expect = 5.6
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 89 KRKKNIQPLPIKSKAKSLQNQ-NIIEAAFPISVPPKIIRKRSPRTRKVETPRKTPTLRSH 147
KR++N+Q +KS+ +LQ+Q N + + PI+ R R K+ T TP S
Sbjct: 695 KRERNMQVERMKSEMYNLQSQLNRMNSFTPINNASHSEGLRHRRNTKLYTDIDTPLQDSG 754
Query: 148 KGLENKHSK 156
G K K
Sbjct: 755 IGSPRKEDK 763
>12_01_0359 +
2736797-2737050,2737801-2738153,2738583-2738821,
2738916-2739035,2739115-2739162
Length = 337
Score = 27.1 bits (57), Expect = 7.4
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 43 LKTMVSKLSQNTVIGP--ESKLD-DWRVPFKTSASVQYEETKRDSCSVPKRKKNIQPLPI 99
L+T+ ++ Q + +S L+ ++ +P S ++ ++ K CS KRKKN
Sbjct: 215 LETLGQQVEQMVEVNTNIQSNLETEFEIPENVSQAIGLKK-KETRCSTSKRKKNWVDKLH 273
Query: 100 KSKAKSLQ-NQNIIEAAFPISVPPKIIRKRSPRTRK 134
K + KSL+ +N E A P + I+ + + +
Sbjct: 274 KKRKKSLRYAKNGNEVAHPEPLEEDILENSTKESHQ 309
>10_02_0167 -
6100676-6102111,6102174-6102708,6102967-6103975,
6104006-6105036
Length = 1336
Score = 27.1 bits (57), Expect = 7.4
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 44 KTMVSKLSQNTVIGPESKLDDWRVPFKTSASVQYEETKRD---SCSV-----PKRKKNIQ 95
+T+ LS E+ +DD V KTS S++ T D SCS+ P++ K I+
Sbjct: 810 RTVQGALSNQLGNNVEAYVDDIVVKTKTSDSLRKRSTNSDDIASCSILRKANPEKIKAIE 869
Query: 96 PLPIKSKAKSLQNQNIIEAAFPISV 120
+ ++ K +Q AA I V
Sbjct: 870 NMKSPTRLKEVQKLTGCMAALSIFV 894
>08_01_0563 - 4993428-4993751,4995478-4995675
Length = 173
Score = 27.1 bits (57), Expect = 7.4
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 107 QNQNIIEAAFPISVPPKIIRKRSPRTRKVETPRKTPTLRSHKGLENKH-SKLKEQIVE 163
Q+++I++ +S P IR + P PT+ G+ NK + L+ Q+ E
Sbjct: 72 QSKHIVDVELELSRIPASIRPQVKTWYDRHFPHAEPTVNGESGISNKEPASLRAQVEE 129
>08_01_0549 + 4811706-4811903,4813631-4813954
Length = 173
Score = 27.1 bits (57), Expect = 7.4
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 107 QNQNIIEAAFPISVPPKIIRKRSPRTRKVETPRKTPTLRSHKGLENKH-SKLKEQIVE 163
Q+++I++ +S P IR + P PT+ G+ NK + L+ Q+ E
Sbjct: 72 QSKHIVDVELELSRIPASIRPQVKTWYDRHFPHAEPTVNGESGISNKEPASLRAQVEE 129
>12_02_1159 +
26585042-26585441,26585520-26585608,26585670-26585720,
26586189-26586282,26586451-26586512,26586589-26586671,
26586793-26586901,26587010-26587051,26587152-26587316,
26588165-26588341,26588820-26588984,26589069-26589332
Length = 566
Score = 26.6 bits (56), Expect = 9.7
Identities = 11/42 (26%), Positives = 25/42 (59%)
Query: 30 QDDVNDHGKTLGDLKTMVSKLSQNTVIGPESKLDDWRVPFKT 71
QDD+ + TLG ++ ++++ ++GP +L ++ + F T
Sbjct: 305 QDDITNVIVTLGSIQIHNKSVARDIIVGPGDELKEFILSFCT 346
>08_02_0187 - 13978194-13979093,13980332-13980679
Length = 415
Score = 26.6 bits (56), Expect = 9.7
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 79 ETKRDSCSVPKRKKNIQPLPIKSKAKSLQNQNIIEAAFPISVPPKIIRKRSPRTRKVETP 138
+TK +S SV K+ PL + + +K LQ + + + ++ P +P K +T
Sbjct: 302 DTKVNSASVTATVKDADPLAVYAISKFLQPKELFKVTEDLAPAP------APEGPKKKTK 355
Query: 139 RKTPTLRS 146
+K P+ S
Sbjct: 356 KKKPSTTS 363
>02_02_0571 - 11664292-11664809,11664900-11665750,11665837-11666468
Length = 666
Score = 26.6 bits (56), Expect = 9.7
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 122 PKIIRKRSPRTRKVETPRKTPTLRSHKGLENKHSKLKEQI 161
P ++KR+ T+K T L H+ ++ H + K+++
Sbjct: 20 PTGLKKRANVTKKFNPDATTSDLNRHRSIDGYHGETKDKV 59
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.129 0.359
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,438,470
Number of Sequences: 37544
Number of extensions: 170312
Number of successful extensions: 487
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 478
Number of HSP's gapped (non-prelim): 21
length of query: 163
length of database: 14,793,348
effective HSP length: 77
effective length of query: 86
effective length of database: 11,902,460
effective search space: 1023611560
effective search space used: 1023611560
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 56 (26.6 bits)
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