GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001975-TA|BGIBMGA001975-PA|undefined
         (163 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    25   1.2  
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    23   3.6  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    22   8.3  

>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)

Query: 119 SVPPKIIRKRSPRTRKVETP 138
           ++  K++R RS  TR++ TP
Sbjct: 77  AIHSKVVRNRSKETRRIRTP 96


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 12/40 (30%), Positives = 17/40 (42%)

Query: 122 PKIIRKRSPRTRKVETPRKTPTLRSHKGLENKHSKLKEQI 161
           PK  RKR    R+    R+TP     +  + K  K K  +
Sbjct: 128 PKEARKRDNNARQRSAQRETPKSSGGQSKQPKKKKKKRSL 167


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 8/33 (24%), Positives = 17/33 (51%)

Query: 29   LQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESK 61
            +QD  NDH   L +L  ++  +    ++  +S+
Sbjct: 1040 VQDAANDHRAKLAELNQILQDIQSKPIVIDDSE 1072


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.313    0.129    0.359 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,559
Number of Sequences: 2123
Number of extensions: 4762
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 3
length of query: 163
length of database: 516,269
effective HSP length: 59
effective length of query: 104
effective length of database: 391,012
effective search space: 40665248
effective search space used: 40665248
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 45 (22.2 bits)