BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001975-TA|BGIBMGA001975-PA|undefined
(163 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 32 0.17
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ... 31 0.53
Z81481-2|CAB03948.1| 593|Caenorhabditis elegans Hypothetical pr... 30 0.70
U80845-1|AAK39181.1| 1217|Caenorhabditis elegans Prion-like-(q/n... 30 0.70
AL117195-1|CAB60770.2| 1077|Caenorhabditis elegans Hypothetical ... 30 0.93
U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical pr... 29 1.2
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 29 1.6
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 2.8
AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ... 28 3.8
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ... 28 3.8
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 28 3.8
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 28 3.8
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 28 3.8
Z49911-9|CAA90133.1| 682|Caenorhabditis elegans Hypothetical pr... 27 5.0
AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical ... 27 5.0
U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical pr... 27 6.6
U37429-12|AAA79353.1| 274|Caenorhabditis elegans Alkylguanine d... 27 6.6
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z81038-15|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 27 8.7
Z81038-14|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 27 8.7
Z70311-3|CAA94372.1| 546|Caenorhabditis elegans Hypothetical pr... 27 8.7
U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like pr... 27 8.7
U40933-1|AAA81672.1| 699|Caenorhabditis elegans Bbs (bardet-bie... 27 8.7
AF036703-2|AAB88557.3| 535|Caenorhabditis elegans Hypothetical ... 27 8.7
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 27 8.7
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 32.3 bits (70), Expect = 0.17
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 12/107 (11%)
Query: 62 LDDWRVPFKTSASVQYEETKRDSCSVPKRK--KNIQPLPIKSKAKSLQ------NQNIIE 113
+D+ V T+ V E T +SC P +K K + P + AK ++ NQ++IE
Sbjct: 1 MDESHVTDNTTDDVLIE-TNENSCD-PNQKGVKRVAQTPPEKDAKKVKLSRDSSNQSVIE 58
Query: 114 AAFPISVPPKIIRKRSPRTRKVETPRKTPTLRSHKGLENKHSKLKEQ 160
+ + P K ++SP+ K KTP + + + K K++E+
Sbjct: 59 LSD--TSPQKETSQQSPKAPKTPKTPKTPKVSREEREKQKREKMEER 103
>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
protein Y53F4B.9 protein.
Length = 1168
Score = 30.7 bits (66), Expect = 0.53
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 119 SVPPKIIRKRSPRTRKVETPRKT--PTLRSHKGLENKHSKLK 158
SV PK + K + +RK E+P KT P +S + ++ + KLK
Sbjct: 480 SVEPKTLEKDAEPSRKSESPEKTVEPPAKSSEEIKEEKKKLK 521
>Z81481-2|CAB03948.1| 593|Caenorhabditis elegans Hypothetical
protein C38D9.2 protein.
Length = 593
Score = 30.3 bits (65), Expect = 0.70
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 95 QPLPIKSKAKSLQNQNIIEAAFPISVPPKIIRKRSPRTRKVETPRKT 141
Q PIKS S +N N +++F + + ++SP + VETP KT
Sbjct: 240 QSSPIKSDGYSSENSNEQDSSFETTTEETPLPEKSP-PKAVETPMKT 285
>U80845-1|AAK39181.1| 1217|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 15
protein.
Length = 1217
Score = 30.3 bits (65), Expect = 0.70
Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 75 VQYEETKRDSCSVPKRKKNIQPLPIKSKAKSLQNQNIIEAAFPISVPPKIIRKRSPRTRK 134
+Q+++ +++ + P + N Q + ++LQN II+ +PP + + PR R
Sbjct: 1006 IQHQQQQQNMMNQPMQSNNNQNMANIQNQQNLQNPPIIQQQQQQQIPPAKVAPK-PRYRG 1064
Query: 135 VETPRKTP 142
+ P + P
Sbjct: 1065 KKNPAQEP 1072
>AL117195-1|CAB60770.2| 1077|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1077
Score = 29.9 bits (64), Expect = 0.93
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 10/128 (7%)
Query: 24 KKLDKLQDDVNDHGKTLG-DLKTM-VSKLSQNTVIGPESKLDDWRVPFKTSAS-VQYEET 80
KK K + + + + L +KT+ V+++S T + ++LD ++P KT V+ E+
Sbjct: 213 KKSVKAEKNAQNLAENLQKSVKTVPVTQISSKTTVSARNRLDLDKIPSKTPQKLVKVEKN 272
Query: 81 KRD---SCSVP---KRKKNIQPLPIKSKAKSLQNQNIIEAAFPI-SVPPKIIRKRSPRTR 133
D S P + + ++Q +P KS Q +E A P K I + R+
Sbjct: 273 SSDAPNSSGNPVSAQNRSDLQEIPRKSVTLEKSAQKSVEMAPEAPETPLKTISQEKNRSE 332
Query: 134 KVETPRKT 141
P K+
Sbjct: 333 SHNLPEKS 340
>U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical
protein C01G5.4 protein.
Length = 1079
Score = 29.5 bits (63), Expect = 1.2
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 26 LDKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESK---LDDWRVPFKTSASV 75
+ KLQ+ DH K +G L+ V+K + SK LDD+ P K ++
Sbjct: 765 IKKLQNQWGDHKKDMGSLENAVAKAKYFVAMINVSKLKTLDDYSAPLKELGAI 817
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 29.1 bits (62), Expect = 1.6
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 4 QRARHTDALQRIMISFK-HFEKKLDKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESKL 62
+RA HT ++ M + H+E+ LQD+V L+ + KLSQ P L
Sbjct: 683 ERASHTAQSEQEMKQLEAHYERAQKMLQDNVEQMNVENRGLRDEIEKLSQQMAALPRGGL 742
Query: 63 DD 64
++
Sbjct: 743 NE 744
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 2.8
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 9 TDALQRIMISFKHFEKKLDKLQDDVNDHGKTLGDLKTMVSKLSQ 52
+D LQ MIS+++ + +L DD N + L + + ++S+LSQ
Sbjct: 364 SDELQERMISYQNNGIDVQQLLDDSNQKTELLDENERILSQLSQ 407
>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
protein Y38E10A.6b protein.
Length = 1345
Score = 27.9 bits (59), Expect = 3.8
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 44 KTMVSKLSQNTVIGPESKLDDWRVPFKTSASVQYEETKRDSCSVPKRKKNIQPLPIKSKA 103
K V++L + V+ K + ++P K + EE+ + S P++ + IQ +P KS+
Sbjct: 903 KKPVNRLVIDEVLKSPQKSE--KIPEKAQEIEEIEESPKKSEKAPEKPQEIQEIPKKSEK 960
Query: 104 KSLQNQNI 111
+ Q I
Sbjct: 961 APEKPQEI 968
>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
protein Y38E10A.6a protein.
Length = 1343
Score = 27.9 bits (59), Expect = 3.8
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 44 KTMVSKLSQNTVIGPESKLDDWRVPFKTSASVQYEETKRDSCSVPKRKKNIQPLPIKSKA 103
K V++L + V+ K + ++P K + EE+ + S P++ + IQ +P KS+
Sbjct: 901 KKPVNRLVIDEVLKSPQKSE--KIPEKAQEIEEIEESPKKSEKAPEKPQEIQEIPKKSEK 958
Query: 104 KSLQNQNI 111
+ Q I
Sbjct: 959 APEKPQEI 966
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 27.9 bits (59), Expect = 3.8
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Query: 20 KHFEKKLDKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESKLDDWRVPFKTSASVQYEE 79
K + + + +D + K+ K +V K S++ PE K + R KTS+ E
Sbjct: 202 KKAKSESESESEDEKEVKKSKKKSKKVVKKESESEDEAPEKKKTEKRKRSKTSSEESSES 261
Query: 80 TKRDSCSVPKRKKNIQPLPIKSK 102
K D + +K P P K K
Sbjct: 262 EKSDE---EEEEKESSPKPKKKK 281
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 27.9 bits (59), Expect = 3.8
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 98 PIKSKAKSLQNQNIIEAAFPISVPPKIIRKRSPR-----TRKVETPRKTPTLRSH-KGLE 151
PIK + + I A+ P+S P K + SP+ + ++P+KTP + +E
Sbjct: 259 PIKKPKTEKEPEKEIPASEPVSSPKKSVIPASPKAISHPSTPAKSPQKTPQKKKEITPVE 318
Query: 152 NKHSKLKEQ 160
K ++KE+
Sbjct: 319 VKIEEIKEE 327
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 27.9 bits (59), Expect = 3.8
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Query: 20 KHFEKKLDKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESKLDDWRVPFKTSASVQYEE 79
K + + + +D + K+ K +V K S++ PE K + R KTS+ E
Sbjct: 202 KKAKSESESESEDEKEVKKSKKKSKKVVKKESESEDEAPEKKKTEKRKRSKTSSEESSES 261
Query: 80 TKRDSCSVPKRKKNIQPLPIKSK 102
K D + +K P P K K
Sbjct: 262 EKSDE---EEEEKESSPKPKKKK 281
>Z49911-9|CAA90133.1| 682|Caenorhabditis elegans Hypothetical
protein M28.7 protein.
Length = 682
Score = 27.5 bits (58), Expect = 5.0
Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 17/100 (17%)
Query: 7 RHTDALQRIMISFKHFEKKLDKLQDDVNDHGKTLGDLKT-----------MVSKLSQN-T 54
+ T+A R KHF ++ +L ++DH + KT + KL Q T
Sbjct: 32 KDTEAASRASFR-KHFVRQCQELHRQLDDHRNRIEKAKTDETYKKENALEQLDKLKQRLT 90
Query: 55 VIGPESKLDDWRVPFKTSASVQYEETKRDSCSVPKRKKNI 94
+ PE + ++ F S Q EE K ++ +RK +
Sbjct: 91 ALSPEKE----QLSFSVSVDSQSEEEKPKMAAIGRRKSTM 126
>AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical
protein M151.4 protein.
Length = 591
Score = 27.5 bits (58), Expect = 5.0
Identities = 30/159 (18%), Positives = 67/159 (42%), Gaps = 8/159 (5%)
Query: 5 RARHTDALQRIMISFKHFEKKLDKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESKLDD 64
+ H +A++ ++ + + ++KL+K+ +D + +LK V+ S + E+
Sbjct: 146 KQEHKEAVETLVEALRAEKEKLEKILEDARKKDDEIEELKKKVNSESSRATLADEAV--- 202
Query: 65 WRVPFKTSASVQYEETKRDSCSVPKRKKNIQPLPIKSKAKSLQNQNIIEAAFPISVPPKI 124
+T EE D + K K+ Q ++ AK ++N+ SV +I
Sbjct: 203 --QKLQTDKDKLEEEYMNDMRDLKKALKDNQE-GLEKIAKDVKNKEGEIEELKKSVSSEI 259
Query: 125 IR--KRSPRTRKVETPRKTPTLRSHKGLENKHSKLKEQI 161
++ + + T ++ + K +E +H K E +
Sbjct: 260 VKATEAAHATDQLRKKLQKQQDEHEKRVEQEHKKEIEDL 298
>U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical
protein C27A2.1 protein.
Length = 1076
Score = 27.1 bits (57), Expect = 6.6
Identities = 28/142 (19%), Positives = 58/142 (40%), Gaps = 9/142 (6%)
Query: 18 SFKHFEKKLDKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESKLD-DWRVPFKT--SAS 74
+ K E ++ K+ V ++ K L L++ + L + I K D +++ + A
Sbjct: 203 AIKRLEDEIGKIMPLVENYRKKLA-LQSKLRLLEKKMKIMEFEKFDREYKAELQNMDGAM 261
Query: 75 VQYEETKRDSCSVPKRKKNIQPLPIKSKAKSLQNQNIIEAAFPISVPPKIIRKRSPRTRK 134
++Y E ++ K +KN++ K +++ Q Q + K+ K + +
Sbjct: 262 IEYREVEKSIAECEKHRKNLEDRIKKDRSQISQMQRSCN-----EILAKVQEKGDKKLME 316
Query: 135 VETPRKTPTLRSHKGLENKHSK 156
R L S K ++H K
Sbjct: 317 DMMQRAKAKLESAKKAADQHEK 338
>U37429-12|AAA79353.1| 274|Caenorhabditis elegans Alkylguanine dna
alkyltransferaseprotein 2 protein.
Length = 274
Score = 27.1 bits (57), Expect = 6.6
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Query: 80 TKRDSCSVPKRKKNIQPLPIKSK------AKSLQNQNIIEAAFPISVPPKIIRKRSPRTR 133
T R + PKR + P PI K AK++ + E P P K+I ++ + +
Sbjct: 159 TSRLPPTSPKRYRQFAPPPISMKQSPKICAKTVSCPSTSEVKSP---PKKMIIQKIQKHQ 215
Query: 134 KVETPRKTPTLRSHKGLENKHSKLKEQI 161
+ P K P ++ K ++ +E+I
Sbjct: 216 EAPKPAKVPKIKGEKKKKDGRQDEQEEI 243
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 22 FEKKLDKLQDDVND---HGKTLGDLKTMV--SKLSQNTVIGPESKLD 63
+EKK++ LQ VND H +T LK + K++Q + + +LD
Sbjct: 529 YEKKIEDLQSQVNDLLMHFETQNKLKEQLDAGKITQEEITESQVELD 575
>Z81038-15|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 26.6 bits (56), Expect = 8.7
Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 1/90 (1%)
Query: 58 PESKLDDWRVPFKTSASVQYEETKRDSCSVPKRKKNIQPLPIKSKAK-SLQNQNIIEAAF 116
P K P KT+ + + DS K KK P KS K +L+ +++
Sbjct: 503 PAKKTPAKSTPAKTAVKKEASSSSDDSSDDEKTKKKSATTPAKSTPKTALKKAESSDSSD 562
Query: 117 PISVPPKIIRKRSPRTRKVETPRKTPTLRS 146
PK + +PR ++ ++ T S
Sbjct: 563 DDEDLPKPSKAVTPRPQRADSEESAETEES 592
>Z81038-14|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 26.6 bits (56), Expect = 8.7
Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 1/90 (1%)
Query: 58 PESKLDDWRVPFKTSASVQYEETKRDSCSVPKRKKNIQPLPIKSKAK-SLQNQNIIEAAF 116
P K P KT+ + + DS K KK P KS K +L+ +++
Sbjct: 778 PAKKTPAKSTPAKTAVKKEASSSSDDSSDDEKTKKKSATTPAKSTPKTALKKAESSDSSD 837
Query: 117 PISVPPKIIRKRSPRTRKVETPRKTPTLRS 146
PK + +PR ++ ++ T S
Sbjct: 838 DDEDLPKPSKAVTPRPQRADSEESAETEES 867
>Z70311-3|CAA94372.1| 546|Caenorhabditis elegans Hypothetical
protein T25B9.4 protein.
Length = 546
Score = 26.6 bits (56), Expect = 8.7
Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 7/70 (10%)
Query: 78 EETKRDSCSVPKRKKNIQPLPIKSKAKSLQNQNII-------EAAFPISVPPKIIRKRSP 130
E K D R P+ + S K ++N + A P S+PP + RS
Sbjct: 398 ENEKPDIDPESNRFNGNMPIRVDSSTKKMRNDTVCIPPPETATVALPNSLPPITVSARSK 457
Query: 131 RTRKVETPRK 140
+RK RK
Sbjct: 458 NSRKSTLKRK 467
>U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like
protein protein 8 protein.
Length = 594
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 23 EKKLDKLQDDVNDHGKTLGDLKTMVSKLSQN 53
E+KLDKL+DD++ + + K V+++ +
Sbjct: 357 EEKLDKLKDDISSREREINAQKEEVNRIKDS 387
>U40933-1|AAA81672.1| 699|Caenorhabditis elegans Bbs (bardet-biedl
syndrome) proteinprotein 2 protein.
Length = 699
Score = 26.6 bits (56), Expect = 8.7
Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Query: 26 LDKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESKLDDWRVPFKTSASVQY-EETKRDS 84
+DK Q + + G+ +L +S Q + K D+R+P T +V + T+
Sbjct: 325 IDKTQQLIREFGQKKHNLMMELSNYEQEEQLADVEKDRDFRIPVDTEVAVVFVVNTELQL 384
Query: 85 CSVPKRKKNIQPLPIKSKAKSLQNQNIIEAAFPISVPPKIIRKRS 129
S+ R + +PI+ + + + E I +PP + RS
Sbjct: 385 LSL--RVEASHNIPIRGVL--IFAEGLFEGESYIWIPPNEYQSRS 425
>AF036703-2|AAB88557.3| 535|Caenorhabditis elegans Hypothetical
protein T11F8.4 protein.
Length = 535
Score = 26.6 bits (56), Expect = 8.7
Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Query: 100 KSKAKSLQNQNIIEAAFPISVPPKIIRKRSPRTRKVETPRKTPTLRSHKGLENKHS 155
KSK Q I P S+ PK KRS T K+ P KTP +SH E + S
Sbjct: 455 KSKGNKDMEQRTIMIDKPGSITPK--SKRSRTTTKI--PHKTPH-KSHLRKEKQES 505
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 26.6 bits (56), Expect = 8.7
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 70 KTSASVQYEETKRDSCSVPKRKKNIQPLPIKSKAKSLQNQNIIEAAFPISVPPKIIRKRS 129
K +S R S R ++ P+ S K + + I A P + PP+ R S
Sbjct: 44 KRDSSRSSRSRSRSSSESDSRSRSSSPVVKNSPPK--RKREPIRA--PSASPPRRRRDDS 99
Query: 130 PRTRKVETPRKT 141
PR R PR+T
Sbjct: 100 PRKRSRSPPRRT 111
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.313 0.129 0.359
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,005,766
Number of Sequences: 27539
Number of extensions: 164627
Number of successful extensions: 696
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 685
Number of HSP's gapped (non-prelim): 31
length of query: 163
length of database: 12,573,161
effective HSP length: 76
effective length of query: 87
effective length of database: 10,480,197
effective search space: 911777139
effective search space used: 911777139
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 56 (26.6 bits)
- SilkBase 1999-2023 -