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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001975-TA|BGIBMGA001975-PA|undefined
         (163 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110471-2|CAB63306.1|  479|Caenorhabditis elegans Hypothetical ...    32   0.17 
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ...    31   0.53 
Z81481-2|CAB03948.1|  593|Caenorhabditis elegans Hypothetical pr...    30   0.70 
U80845-1|AAK39181.1| 1217|Caenorhabditis elegans Prion-like-(q/n...    30   0.70 
AL117195-1|CAB60770.2| 1077|Caenorhabditis elegans Hypothetical ...    30   0.93 
U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical pr...    29   1.2  
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass...    29   1.6  
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ...    28   2.8  
AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ...    28   3.8  
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ...    28   3.8  
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.      28   3.8  
AF003386-14|AAK82896.1|  811|Caenorhabditis elegans Hypothetical...    28   3.8  
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge...    28   3.8  
Z49911-9|CAA90133.1|  682|Caenorhabditis elegans Hypothetical pr...    27   5.0  
AF024502-2|AAK77623.1|  591|Caenorhabditis elegans Hypothetical ...    27   5.0  
U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical pr...    27   6.6  
U37429-12|AAA79353.1|  274|Caenorhabditis elegans Alkylguanine d...    27   6.6  
U23484-5|AAK93844.1|  590|Caenorhabditis elegans Hypothetical pr...    27   6.6  
Z81038-15|CAI79153.1|  696|Caenorhabditis elegans Hypothetical p...    27   8.7  
Z81038-14|CAB02755.1|  971|Caenorhabditis elegans Hypothetical p...    27   8.7  
Z70311-3|CAA94372.1|  546|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U41528-3|AAK39170.2|  594|Caenorhabditis elegans Kinesin-like pr...    27   8.7  
U40933-1|AAA81672.1|  699|Caenorhabditis elegans Bbs (bardet-bie...    27   8.7  
AF036703-2|AAB88557.3|  535|Caenorhabditis elegans Hypothetical ...    27   8.7  
AC006627-3|AAK85461.1|  504|Caenorhabditis elegans Hypothetical ...    27   8.7  

>AL110471-2|CAB63306.1|  479|Caenorhabditis elegans Hypothetical
           protein T06D10.2 protein.
          Length = 479

 Score = 32.3 bits (70), Expect = 0.17
 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 12/107 (11%)

Query: 62  LDDWRVPFKTSASVQYEETKRDSCSVPKRK--KNIQPLPIKSKAKSLQ------NQNIIE 113
           +D+  V   T+  V  E T  +SC  P +K  K +   P +  AK ++      NQ++IE
Sbjct: 1   MDESHVTDNTTDDVLIE-TNENSCD-PNQKGVKRVAQTPPEKDAKKVKLSRDSSNQSVIE 58

Query: 114 AAFPISVPPKIIRKRSPRTRKVETPRKTPTLRSHKGLENKHSKLKEQ 160
            +   + P K   ++SP+  K     KTP +   +  + K  K++E+
Sbjct: 59  LSD--TSPQKETSQQSPKAPKTPKTPKTPKVSREEREKQKREKMEER 103


>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
           protein Y53F4B.9 protein.
          Length = 1168

 Score = 30.7 bits (66), Expect = 0.53
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)

Query: 119 SVPPKIIRKRSPRTRKVETPRKT--PTLRSHKGLENKHSKLK 158
           SV PK + K +  +RK E+P KT  P  +S + ++ +  KLK
Sbjct: 480 SVEPKTLEKDAEPSRKSESPEKTVEPPAKSSEEIKEEKKKLK 521


>Z81481-2|CAB03948.1|  593|Caenorhabditis elegans Hypothetical
           protein C38D9.2 protein.
          Length = 593

 Score = 30.3 bits (65), Expect = 0.70
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 95  QPLPIKSKAKSLQNQNIIEAAFPISVPPKIIRKRSPRTRKVETPRKT 141
           Q  PIKS   S +N N  +++F  +     + ++SP  + VETP KT
Sbjct: 240 QSSPIKSDGYSSENSNEQDSSFETTTEETPLPEKSP-PKAVETPMKT 285


>U80845-1|AAK39181.1| 1217|Caenorhabditis elegans
            Prion-like-(q/n-rich)-domain-bearingprotein protein 15
            protein.
          Length = 1217

 Score = 30.3 bits (65), Expect = 0.70
 Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 75   VQYEETKRDSCSVPKRKKNIQPLPIKSKAKSLQNQNIIEAAFPISVPPKIIRKRSPRTRK 134
            +Q+++ +++  + P +  N Q +      ++LQN  II+      +PP  +  + PR R 
Sbjct: 1006 IQHQQQQQNMMNQPMQSNNNQNMANIQNQQNLQNPPIIQQQQQQQIPPAKVAPK-PRYRG 1064

Query: 135  VETPRKTP 142
             + P + P
Sbjct: 1065 KKNPAQEP 1072


>AL117195-1|CAB60770.2| 1077|Caenorhabditis elegans Hypothetical
           protein Y57A10A.1 protein.
          Length = 1077

 Score = 29.9 bits (64), Expect = 0.93
 Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 10/128 (7%)

Query: 24  KKLDKLQDDVNDHGKTLG-DLKTM-VSKLSQNTVIGPESKLDDWRVPFKTSAS-VQYEET 80
           KK  K + +  +  + L   +KT+ V+++S  T +   ++LD  ++P KT    V+ E+ 
Sbjct: 213 KKSVKAEKNAQNLAENLQKSVKTVPVTQISSKTTVSARNRLDLDKIPSKTPQKLVKVEKN 272

Query: 81  KRD---SCSVP---KRKKNIQPLPIKSKAKSLQNQNIIEAAFPI-SVPPKIIRKRSPRTR 133
             D   S   P   + + ++Q +P KS       Q  +E A      P K I +   R+ 
Sbjct: 273 SSDAPNSSGNPVSAQNRSDLQEIPRKSVTLEKSAQKSVEMAPEAPETPLKTISQEKNRSE 332

Query: 134 KVETPRKT 141
               P K+
Sbjct: 333 SHNLPEKS 340


>U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical
           protein C01G5.4 protein.
          Length = 1079

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)

Query: 26  LDKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESK---LDDWRVPFKTSASV 75
           + KLQ+   DH K +G L+  V+K      +   SK   LDD+  P K   ++
Sbjct: 765 IKKLQNQWGDHKKDMGSLENAVAKAKYFVAMINVSKLKTLDDYSAPLKELGAI 817


>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 59 protein.
          Length = 1592

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 4   QRARHTDALQRIMISFK-HFEKKLDKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESKL 62
           +RA HT   ++ M   + H+E+    LQD+V         L+  + KLSQ     P   L
Sbjct: 683 ERASHTAQSEQEMKQLEAHYERAQKMLQDNVEQMNVENRGLRDEIEKLSQQMAALPRGGL 742

Query: 63  DD 64
           ++
Sbjct: 743 NE 744


>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
           protein Y48G9A.4 protein.
          Length = 1115

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 15/44 (34%), Positives = 27/44 (61%)

Query: 9   TDALQRIMISFKHFEKKLDKLQDDVNDHGKTLGDLKTMVSKLSQ 52
           +D LQ  MIS+++    + +L DD N   + L + + ++S+LSQ
Sbjct: 364 SDELQERMISYQNNGIDVQQLLDDSNQKTELLDENERILSQLSQ 407


>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
           protein Y38E10A.6b protein.
          Length = 1345

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%)

Query: 44  KTMVSKLSQNTVIGPESKLDDWRVPFKTSASVQYEETKRDSCSVPKRKKNIQPLPIKSKA 103
           K  V++L  + V+    K +  ++P K     + EE+ + S   P++ + IQ +P KS+ 
Sbjct: 903 KKPVNRLVIDEVLKSPQKSE--KIPEKAQEIEEIEESPKKSEKAPEKPQEIQEIPKKSEK 960

Query: 104 KSLQNQNI 111
              + Q I
Sbjct: 961 APEKPQEI 968


>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
           protein Y38E10A.6a protein.
          Length = 1343

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%)

Query: 44  KTMVSKLSQNTVIGPESKLDDWRVPFKTSASVQYEETKRDSCSVPKRKKNIQPLPIKSKA 103
           K  V++L  + V+    K +  ++P K     + EE+ + S   P++ + IQ +P KS+ 
Sbjct: 901 KKPVNRLVIDEVLKSPQKSE--KIPEKAQEIEEIEESPKKSEKAPEKPQEIQEIPKKSEK 958

Query: 104 KSLQNQNI 111
              + Q I
Sbjct: 959 APEKPQEI 966


>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
          Length = 1359

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 3/83 (3%)

Query: 20  KHFEKKLDKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESKLDDWRVPFKTSASVQYEE 79
           K  + + +   +D  +  K+    K +V K S++    PE K  + R   KTS+    E 
Sbjct: 202 KKAKSESESESEDEKEVKKSKKKSKKVVKKESESEDEAPEKKKTEKRKRSKTSSEESSES 261

Query: 80  TKRDSCSVPKRKKNIQPLPIKSK 102
            K D     + +K   P P K K
Sbjct: 262 EKSDE---EEEEKESSPKPKKKK 281


>AF003386-14|AAK82896.1|  811|Caenorhabditis elegans Hypothetical
           protein F59E12.1 protein.
          Length = 811

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 6/69 (8%)

Query: 98  PIKSKAKSLQNQNIIEAAFPISVPPKIIRKRSPR-----TRKVETPRKTPTLRSH-KGLE 151
           PIK      + +  I A+ P+S P K +   SP+     +   ++P+KTP  +     +E
Sbjct: 259 PIKKPKTEKEPEKEIPASEPVSSPKKSVIPASPKAISHPSTPAKSPQKTPQKKKEITPVE 318

Query: 152 NKHSKLKEQ 160
            K  ++KE+
Sbjct: 319 VKIEEIKEE 327


>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
           related protein 1 protein.
          Length = 1359

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 3/83 (3%)

Query: 20  KHFEKKLDKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESKLDDWRVPFKTSASVQYEE 79
           K  + + +   +D  +  K+    K +V K S++    PE K  + R   KTS+    E 
Sbjct: 202 KKAKSESESESEDEKEVKKSKKKSKKVVKKESESEDEAPEKKKTEKRKRSKTSSEESSES 261

Query: 80  TKRDSCSVPKRKKNIQPLPIKSK 102
            K D     + +K   P P K K
Sbjct: 262 EKSDE---EEEEKESSPKPKKKK 281


>Z49911-9|CAA90133.1|  682|Caenorhabditis elegans Hypothetical
           protein M28.7 protein.
          Length = 682

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 17/100 (17%)

Query: 7   RHTDALQRIMISFKHFEKKLDKLQDDVNDHGKTLGDLKT-----------MVSKLSQN-T 54
           + T+A  R     KHF ++  +L   ++DH   +   KT            + KL Q  T
Sbjct: 32  KDTEAASRASFR-KHFVRQCQELHRQLDDHRNRIEKAKTDETYKKENALEQLDKLKQRLT 90

Query: 55  VIGPESKLDDWRVPFKTSASVQYEETKRDSCSVPKRKKNI 94
            + PE +    ++ F  S   Q EE K    ++ +RK  +
Sbjct: 91  ALSPEKE----QLSFSVSVDSQSEEEKPKMAAIGRRKSTM 126


>AF024502-2|AAK77623.1|  591|Caenorhabditis elegans Hypothetical
           protein M151.4 protein.
          Length = 591

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 30/159 (18%), Positives = 67/159 (42%), Gaps = 8/159 (5%)

Query: 5   RARHTDALQRIMISFKHFEKKLDKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESKLDD 64
           +  H +A++ ++ + +  ++KL+K+ +D       + +LK  V+  S    +  E+    
Sbjct: 146 KQEHKEAVETLVEALRAEKEKLEKILEDARKKDDEIEELKKKVNSESSRATLADEAV--- 202

Query: 65  WRVPFKTSASVQYEETKRDSCSVPKRKKNIQPLPIKSKAKSLQNQNIIEAAFPISVPPKI 124
                +T      EE   D   + K  K+ Q   ++  AK ++N+         SV  +I
Sbjct: 203 --QKLQTDKDKLEEEYMNDMRDLKKALKDNQE-GLEKIAKDVKNKEGEIEELKKSVSSEI 259

Query: 125 IR--KRSPRTRKVETPRKTPTLRSHKGLENKHSKLKEQI 161
           ++  + +  T ++    +       K +E +H K  E +
Sbjct: 260 VKATEAAHATDQLRKKLQKQQDEHEKRVEQEHKKEIEDL 298


>U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical
           protein C27A2.1 protein.
          Length = 1076

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 28/142 (19%), Positives = 58/142 (40%), Gaps = 9/142 (6%)

Query: 18  SFKHFEKKLDKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESKLD-DWRVPFKT--SAS 74
           + K  E ++ K+   V ++ K L  L++ +  L +   I    K D +++   +    A 
Sbjct: 203 AIKRLEDEIGKIMPLVENYRKKLA-LQSKLRLLEKKMKIMEFEKFDREYKAELQNMDGAM 261

Query: 75  VQYEETKRDSCSVPKRKKNIQPLPIKSKAKSLQNQNIIEAAFPISVPPKIIRKRSPRTRK 134
           ++Y E ++      K +KN++    K +++  Q Q          +  K+  K   +  +
Sbjct: 262 IEYREVEKSIAECEKHRKNLEDRIKKDRSQISQMQRSCN-----EILAKVQEKGDKKLME 316

Query: 135 VETPRKTPTLRSHKGLENKHSK 156
               R    L S K   ++H K
Sbjct: 317 DMMQRAKAKLESAKKAADQHEK 338


>U37429-12|AAA79353.1|  274|Caenorhabditis elegans Alkylguanine dna
           alkyltransferaseprotein 2 protein.
          Length = 274

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 9/88 (10%)

Query: 80  TKRDSCSVPKRKKNIQPLPIKSK------AKSLQNQNIIEAAFPISVPPKIIRKRSPRTR 133
           T R   + PKR +   P PI  K      AK++   +  E   P   P K+I ++  + +
Sbjct: 159 TSRLPPTSPKRYRQFAPPPISMKQSPKICAKTVSCPSTSEVKSP---PKKMIIQKIQKHQ 215

Query: 134 KVETPRKTPTLRSHKGLENKHSKLKEQI 161
           +   P K P ++  K  ++     +E+I
Sbjct: 216 EAPKPAKVPKIKGEKKKKDGRQDEQEEI 243


>U23484-5|AAK93844.1|  590|Caenorhabditis elegans Hypothetical
           protein EEED8.16 protein.
          Length = 590

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 5/47 (10%)

Query: 22  FEKKLDKLQDDVND---HGKTLGDLKTMV--SKLSQNTVIGPESKLD 63
           +EKK++ LQ  VND   H +T   LK  +   K++Q  +   + +LD
Sbjct: 529 YEKKIEDLQSQVNDLLMHFETQNKLKEQLDAGKITQEEITESQVELD 575


>Z81038-15|CAI79153.1|  696|Caenorhabditis elegans Hypothetical
           protein C25A1.10b protein.
          Length = 696

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 1/90 (1%)

Query: 58  PESKLDDWRVPFKTSASVQYEETKRDSCSVPKRKKNIQPLPIKSKAK-SLQNQNIIEAAF 116
           P  K      P KT+   +   +  DS    K KK     P KS  K +L+     +++ 
Sbjct: 503 PAKKTPAKSTPAKTAVKKEASSSSDDSSDDEKTKKKSATTPAKSTPKTALKKAESSDSSD 562

Query: 117 PISVPPKIIRKRSPRTRKVETPRKTPTLRS 146
                PK  +  +PR ++ ++     T  S
Sbjct: 563 DDEDLPKPSKAVTPRPQRADSEESAETEES 592


>Z81038-14|CAB02755.1|  971|Caenorhabditis elegans Hypothetical
           protein C25A1.10a protein.
          Length = 971

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 1/90 (1%)

Query: 58  PESKLDDWRVPFKTSASVQYEETKRDSCSVPKRKKNIQPLPIKSKAK-SLQNQNIIEAAF 116
           P  K      P KT+   +   +  DS    K KK     P KS  K +L+     +++ 
Sbjct: 778 PAKKTPAKSTPAKTAVKKEASSSSDDSSDDEKTKKKSATTPAKSTPKTALKKAESSDSSD 837

Query: 117 PISVPPKIIRKRSPRTRKVETPRKTPTLRS 146
                PK  +  +PR ++ ++     T  S
Sbjct: 838 DDEDLPKPSKAVTPRPQRADSEESAETEES 867


>Z70311-3|CAA94372.1|  546|Caenorhabditis elegans Hypothetical
           protein T25B9.4 protein.
          Length = 546

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 7/70 (10%)

Query: 78  EETKRDSCSVPKRKKNIQPLPIKSKAKSLQNQNII-------EAAFPISVPPKIIRKRSP 130
           E  K D      R     P+ + S  K ++N  +          A P S+PP  +  RS 
Sbjct: 398 ENEKPDIDPESNRFNGNMPIRVDSSTKKMRNDTVCIPPPETATVALPNSLPPITVSARSK 457

Query: 131 RTRKVETPRK 140
            +RK    RK
Sbjct: 458 NSRKSTLKRK 467


>U41528-3|AAK39170.2|  594|Caenorhabditis elegans Kinesin-like
           protein protein 8 protein.
          Length = 594

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 10/31 (32%), Positives = 20/31 (64%)

Query: 23  EKKLDKLQDDVNDHGKTLGDLKTMVSKLSQN 53
           E+KLDKL+DD++   + +   K  V+++  +
Sbjct: 357 EEKLDKLKDDISSREREINAQKEEVNRIKDS 387


>U40933-1|AAA81672.1|  699|Caenorhabditis elegans Bbs (bardet-biedl
           syndrome) proteinprotein 2 protein.
          Length = 699

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 5/105 (4%)

Query: 26  LDKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESKLDDWRVPFKTSASVQY-EETKRDS 84
           +DK Q  + + G+   +L   +S   Q   +    K  D+R+P  T  +V +   T+   
Sbjct: 325 IDKTQQLIREFGQKKHNLMMELSNYEQEEQLADVEKDRDFRIPVDTEVAVVFVVNTELQL 384

Query: 85  CSVPKRKKNIQPLPIKSKAKSLQNQNIIEAAFPISVPPKIIRKRS 129
            S+  R +    +PI+     +  + + E    I +PP   + RS
Sbjct: 385 LSL--RVEASHNIPIRGVL--IFAEGLFEGESYIWIPPNEYQSRS 425


>AF036703-2|AAB88557.3|  535|Caenorhabditis elegans Hypothetical
           protein T11F8.4 protein.
          Length = 535

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 5/56 (8%)

Query: 100 KSKAKSLQNQNIIEAAFPISVPPKIIRKRSPRTRKVETPRKTPTLRSHKGLENKHS 155
           KSK      Q  I    P S+ PK   KRS  T K+  P KTP  +SH   E + S
Sbjct: 455 KSKGNKDMEQRTIMIDKPGSITPK--SKRSRTTTKI--PHKTPH-KSHLRKEKQES 505


>AC006627-3|AAK85461.1|  504|Caenorhabditis elegans Hypothetical
           protein E01A2.4 protein.
          Length = 504

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 4/72 (5%)

Query: 70  KTSASVQYEETKRDSCSVPKRKKNIQPLPIKSKAKSLQNQNIIEAAFPISVPPKIIRKRS 129
           K  +S       R S     R ++  P+   S  K  + +  I A  P + PP+  R  S
Sbjct: 44  KRDSSRSSRSRSRSSSESDSRSRSSSPVVKNSPPK--RKREPIRA--PSASPPRRRRDDS 99

Query: 130 PRTRKVETPRKT 141
           PR R    PR+T
Sbjct: 100 PRKRSRSPPRRT 111


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.313    0.129    0.359 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,005,766
Number of Sequences: 27539
Number of extensions: 164627
Number of successful extensions: 696
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 685
Number of HSP's gapped (non-prelim): 31
length of query: 163
length of database: 12,573,161
effective HSP length: 76
effective length of query: 87
effective length of database: 10,480,197
effective search space: 911777139
effective search space used: 911777139
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 56 (26.6 bits)

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