Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001974-TA|BGIBMGA001974-PA|undefined
(308 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48199| Best HMM Match : Lig_chan (HMM E-Value=0) 63 2e-10
SB_15542| Best HMM Match : Lig_chan (HMM E-Value=0) 60 3e-09
SB_41275| Best HMM Match : Lig_chan (HMM E-Value=2.3e-11) 56 4e-08
SB_12803| Best HMM Match : Lig_chan (HMM E-Value=0) 46 5e-05
SB_12363| Best HMM Match : Lig_chan (HMM E-Value=2.5e-34) 44 2e-04
SB_32486| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_48408| Best HMM Match : Lig_chan (HMM E-Value=0.19) 40 0.003
SB_3063| Best HMM Match : Lig_chan (HMM E-Value=5.4e-13) 40 0.003
SB_14385| Best HMM Match : ANF_receptor (HMM E-Value=6.5e-35) 36 0.042
SB_2829| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.097
SB_35425| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_28347| Best HMM Match : SBP_bac_3 (HMM E-Value=2.6) 31 1.2
SB_14165| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_32575| Best HMM Match : SNF7 (HMM E-Value=1.1) 29 3.6
SB_48410| Best HMM Match : Lig_chan (HMM E-Value=3.5e-05) 29 4.8
SB_1815| Best HMM Match : Lig_chan (HMM E-Value=1.4) 29 4.8
SB_53136| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28) 29 6.3
SB_35054| Best HMM Match : Lig_chan (HMM E-Value=1.2e-32) 29 6.3
>SB_48199| Best HMM Match : Lig_chan (HMM E-Value=0)
Length = 771
Score = 63.3 bits (147), Expect = 2e-10
Identities = 49/218 (22%), Positives = 98/218 (44%), Gaps = 14/218 (6%)
Query: 78 WGYKVNGQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQPPLPS 137
+G NG+W G++ +L +AD+ + ER V+ ++ FR+ + ++P
Sbjct: 463 YGSVKNGEWRGILGELVRQEADIAIGPITITAEREQVIDFSKPFLDFRIAMILQKPLEED 522
Query: 138 V-ANIFYLPFTGRVWAAVAVCAMVYTAAIYWA----SKWEFNLEKRSASQFDG---TVGD 189
V F +PF +WA + T + W S + F E ++ + +G ++ +
Sbjct: 523 VDLFAFLMPFQKDLWACCCLVVGAVT-ILMWILDRFSPYGFRAEAKNTGEGEGDEFSLPN 581
Query: 190 AMLLTMSALSQQGCFIEPKRAPGRIMLFVLFTALMALYAAYSANIVVLLQAPS--NSITS 247
++ ++ QQG P+ GR++ + + L + Y+AN+ A + ++I S
Sbjct: 582 SLWFATGSILQQGGDNTPRSGSGRVLAASFWLFTLILISTYTANLAAFFTAQNSKSTINS 641
Query: 248 LAQLAASKVTLAANDVDYNHFVFSLYKDPVRVMIHKRI 285
L L A V V +FS + + +V I+K++
Sbjct: 642 LEDLVAQDV--FKYGVQQGGSLFSFF-EKSKVRIYKKM 676
>SB_15542| Best HMM Match : Lig_chan (HMM E-Value=0)
Length = 729
Score = 59.7 bits (138), Expect = 3e-09
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 9/183 (4%)
Query: 82 VNGQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQPPLPSVANI 141
VNG+ +GM+ DL KAD+ + ER S + ++ F + ++ ++
Sbjct: 220 VNGRVTGMVGDLIDKKADMALAPITITAERESKIDFSKPFMDFMQSLIMKEMKEEEISLF 279
Query: 142 -FYLPFTGRVWAAVAVCAMVYTAAIYWASKWEFNLEKRSASQFDGTVGD------AMLLT 194
F PF G VW + V + T ++ W + A D GD ++
Sbjct: 280 AFVQPFDGTVWLLIIVVVLFVTIMMFVVDLWSPFGHRAEARITDEGAGDEFNLFNSLWFA 339
Query: 195 MSALSQQGCFIEPKRAPGRIMLFVLFTALMALYAAYSANIVVLL--QAPSNSITSLAQLA 252
+++ QQG PK GRI+ + ++ + + Y+AN+ + N I +L L
Sbjct: 340 TASMLQQGPDNTPKSPSGRILASAFWFFILIIISTYTANLAAFFTKKTSKNFIETLDDLT 399
Query: 253 ASK 255
K
Sbjct: 400 KQK 402
>SB_41275| Best HMM Match : Lig_chan (HMM E-Value=2.3e-11)
Length = 1171
Score = 56.0 bits (129), Expect = 4e-08
Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 4/169 (2%)
Query: 79 GYKVNGQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQPPLPSV 138
G K +G + G+ D+ + KADL T + + RL + +++ + V R+P +
Sbjct: 47 GVKEDGTYYGLFGDIQSEKADLTTLPLTINSARLQYLDFSEPFMHVSMDLVTRKPEEKQI 106
Query: 139 -ANIFYLPFTGRVWAAVAVCAMVYTAA---IYWASKWEFNLEKRSASQFDGTVGDAMLLT 194
F P+T VW C + T + + S + L + + +++
Sbjct: 107 DITGFMTPYTIPVWLMTMACWIFVTGCLSLVNYYSPYGHRLRDTEGDGDEFSFFNSLWFC 166
Query: 195 MSALSQQGCFIEPKRAPGRIMLFVLFTALMALYAAYSANIVVLLQAPSN 243
++++ QQG PK GRI+ L+ ++ + Y+AN+ L S+
Sbjct: 167 LASMLQQGGDATPKMLSGRIVTGTLWFVILVWVSTYTANLAAFLTTSSS 215
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/129 (17%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 84 GQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQPPLPS-VANIF 142
G ++G++ + KADL T+ + ERL + ++ F + + ++ + F
Sbjct: 824 GGYTGIVGQIIKGKADLSTSPLTITSERLQYLEFSKPFMQFTMSLISKKFDNDNQYLMAF 883
Query: 143 YLPFTGRVWAAVAVCAMVYTAAIY---WASKWEFNLEKRSASQFDGTVGDAMLLTMSALS 199
P++ VW ++ T ++ + S + + +S + +++ ++++
Sbjct: 884 MRPYSSTVWLLTLAGLLLVTILMFVVNYISPYGYRKSHKSKNGEAFNFFNSLWFCLASML 943
Query: 200 QQGCFIEPK 208
QQG P+
Sbjct: 944 QQGADSTPR 952
>SB_12803| Best HMM Match : Lig_chan (HMM E-Value=0)
Length = 1001
Score = 45.6 bits (103), Expect = 5e-05
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 82 VNGQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFR-QPPLPSVAN 140
V G W+GM+ D+ T +AD+ + R V+ ++ + + R L SV N
Sbjct: 361 VTGLWNGMVGDIITGEADMALATLTITASRSRVIDFSSPYGEVGIGILARTDTTLGSVVN 420
Query: 141 I-FYLPFTGRVWAAVAVCAMVYTAAIYWA---SKWEFNLEKRS 179
+ F +P + ++W V + +++ + W WE+ L+ RS
Sbjct: 421 MDFMIPLSSQLW-TVILATILFVIIVLWVLDRKSWEWYLKGRS 462
>SB_12363| Best HMM Match : Lig_chan (HMM E-Value=2.5e-34)
Length = 960
Score = 43.6 bits (98), Expect = 2e-04
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 60 KLAFQMLNATPRYTFSY--RWGY--KVNGQWSGMINDLHTSKADLGTNCVVSDVERLSVV 115
+L Q LN P FS ++G +VN W+G++ +L K D+ + +S R +V+
Sbjct: 421 ELIKQALNFEPELRFSEDGQFGVYDEVNKTWNGIVKELLDDKGDITLDLYIS-ARRATVL 479
Query: 116 TYTDMLAPFRVRFVFRQPPLPSVANIFYL----PFTGRVWAAVAVCAMVYTAAIYWASK- 170
+T+ AP +R + ++ NI++L PFT VW + + + ++ K
Sbjct: 480 DFTEPYAPSGIRLLVKERS-GKGGNIYWLSYLRPFTMNVWLTLLGSMGIMSLFLWLVEKL 538
Query: 171 ----WEFNLEKRSASQFDGTVGDAML 192
E N KRS + +D D L
Sbjct: 539 APCRQESNPIKRSVNDYDKEENDQAL 564
>SB_32486| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 914
Score = 41.9 bits (94), Expect = 6e-04
Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 81 KVNGQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFR----QPPLP 136
K G W+G++ DL ++AD+G ++ ER V+ + + + + + + + P
Sbjct: 468 KRTGHWNGIVEDLMHNEADMGVGLAITH-ERAKVIDFAEPNSKIGLAIIVKINNAEHQEP 526
Query: 137 SVANIFYLPFTGRVWAAVAVCAMVYTAAIYWASKWEFNLEKRSASQFDGTVGDAMLLTMS 196
+ F LPF W V ++ I W ++ + R+ F+ AM L
Sbjct: 527 NDVFKFLLPFDLNAWLCVLGIVHLFIVLI-WGTEKALH---RNVPFFE----IAMYLISI 578
Query: 197 ALSQQ-GCFIEPKRAPGRIMLFVLFTALMALYAAYSANI 234
AL + G + P+ GR + V + + AAYSAN+
Sbjct: 579 ALGRDTGNDMRPQSMTGRWLSTVFSFISLVVVAAYSANL 617
>SB_48408| Best HMM Match : Lig_chan (HMM E-Value=0.19)
Length = 705
Score = 39.9 bits (89), Expect = 0.003
Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 8/179 (4%)
Query: 85 QWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQPPLPSVANI--- 141
+W GMI DL KA+L + + R V+ Y+++ + R + ++
Sbjct: 504 RWCGMIGDLIDGKAELALTSLELSLAREEVIDYSNVPLMYHDRVIVMAVKSSYTSHDWFG 563
Query: 142 FYLPFTGRVWAAVAVCAMVYTAAIYWASKWEFNLEKRSASQFDGTVGDAMLLTMSALSQQ 201
F PF+ +W +++ ++ K+ K F T+ D+ S + +
Sbjct: 564 FTKPFSTTLWITFGAASVILVIVVWLIDKYSPYGHKHHFQVF--TLRDSFSYLSSTVFKI 621
Query: 202 GCFIEPKRAPGRIMLFVLFT-ALMALYAAYSANIVVLLQAPSNS--ITSLAQLAASKVT 257
R+P + +F+ + L + Y+AN++V L IT + AS +T
Sbjct: 622 NLDDVTARSPSARFTYAVFSFGTLVLISTYTANLMVSLMEVKVKFPITGIRDPKASLIT 680
>SB_3063| Best HMM Match : Lig_chan (HMM E-Value=5.4e-13)
Length = 880
Score = 39.9 bits (89), Expect = 0.003
Identities = 35/164 (21%), Positives = 68/164 (41%), Gaps = 9/164 (5%)
Query: 83 NGQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDML--APFRVRFVFRQPPLPSVAN 140
+G+W+G++ DL +AD+ + + ++ R VV ++ A + + + + +
Sbjct: 486 SGEWNGVVRDLIRGEADISIDLMTNEA-RSDVVDFSLRWTHAGLALLVLVGEKNVEPIDF 544
Query: 141 IFYLPFTGRVWAAVAVCAMVYTAAIYWASKWE----FNLEKRSASQFDGTVGDAMLLTMS 196
F+ PFT ++W + VY A++ A + + KRS D +
Sbjct: 545 AFFDPFTWQLWVGIIATVNVYLVALWIADRLSPYGYHQINKRSVDNKRHFELDGSMWYCW 604
Query: 197 ALSQQGCFIE--PKRAPGRIMLFVLFTALMALYAAYSANIVVLL 238
+ F+E P R M L T + +Y+AN+ L
Sbjct: 605 GVCFDNQFVEQRPAAYSSRAMSVCLATFALLCLTSYTANLTAHL 648
>SB_14385| Best HMM Match : ANF_receptor (HMM E-Value=6.5e-35)
Length = 1003
Score = 35.9 bits (79), Expect = 0.042
Identities = 19/73 (26%), Positives = 28/73 (38%)
Query: 82 VNGQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQPPLPSVANI 141
V G W G+IN+L +ADL + R V+ +T + V P
Sbjct: 418 VTGNWDGVINELIQERADLAVGPITITSHRWKVIDFTQPFMTSGIGVVMGTENSPKPYFR 477
Query: 142 FYLPFTGRVWAAV 154
F PF +W +
Sbjct: 478 FLEPFKSDLWITI 490
>SB_2829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 34.7 bits (76), Expect = 0.097
Identities = 34/159 (21%), Positives = 62/159 (38%), Gaps = 8/159 (5%)
Query: 85 QWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQPPLPSVANI--- 141
+W+GMI DL +A+L R V+ + D + R + P S +
Sbjct: 497 RWNGMIGDLVDGRAELALTSFEMSSARQDVIDFADAAFMYHDRVII-MPVKSSYTSHDWF 555
Query: 142 -FYLPFTGRVWAAVAVCAMVYTAAIYWASKWEFNLEKRSASQFDGTVGDAMLLTMSALSQ 200
F PF +W A ++V ++ + K F T+ D+ S + +
Sbjct: 556 GFMKPFGTHLWVAFVSTSVVLVIMVWLIDMYSPYGYKHHFQVF--TLRDSFSDLSSTVFK 613
Query: 201 QGCFIEPKRAPGRIMLFVLFT-ALMALYAAYSANIVVLL 238
R+P + +F+ + L + Y+AN++V L
Sbjct: 614 INLDDVTARSPSARFTYAVFSFGTLILISTYTANLMVFL 652
>SB_35425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 996
Score = 32.3 bits (70), Expect = 0.52
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 77 RWGYKV-NGQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTD----MLAPFRVRFVFR 131
+WG ++ + +W+G++N+L T K D+ +S +RL+ V +T + V+ +
Sbjct: 508 KWGTQLASDEWNGLMNELVTGKGDITAFLGISS-QRLADVEFTQPYFTLQLTILVKTINA 566
Query: 132 QPPLPSVANIFYLPFTGRVWA-AVAVCAMVYTAAIYWA 168
P + F PF +W +A C +V + WA
Sbjct: 567 SELNPQIHWNFQDPFHWDLWVMVIASCNIV--LVVIWA 602
>SB_28347| Best HMM Match : SBP_bac_3 (HMM E-Value=2.6)
Length = 212
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 82 VNGQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQPPLPSVANI 141
V +W+G++ ++ +ADL + ER V+ +T + + + P N
Sbjct: 131 VTKEWNGVVREVLNGRADLAVTSLTISPERQKVIDFTQPYMDLGLTVLIKPDPTEE-KNP 189
Query: 142 FYL--PFTGRVWAAV 154
F + PF +W A+
Sbjct: 190 FAILRPFRYDLWMAI 204
>SB_14165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1837
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 2/88 (2%)
Query: 86 WSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQPPLPSVAN--IFY 143
W+ ++ ++ +ADL + RL V Y + + V Q + F
Sbjct: 600 WNNLVGEVVLGRADLAAAPIAITNARLKDVEYASPIQQLEIYIVMSQNRAKISLDWLAFI 659
Query: 144 LPFTGRVWAAVAVCAMVYTAAIYWASKW 171
PF +W + + I+W +W
Sbjct: 660 RPFDNSLWFVIFGLSFALVFYIWWMDQW 687
>SB_32575| Best HMM Match : SNF7 (HMM E-Value=1.1)
Length = 579
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 249 AQLAASKVTLAANDVDYNHFVFSLYKDPVRVMIHKRIDPETGNGQFYSLEDGVDMI 304
A+ A +V A +DV N F +K +R K + P+ N +F + DGV +
Sbjct: 286 ARAAMGEVKKAEDDVTKNERKFQEFKTELRTFETKTLLPQVRNVEFKNALDGVKSV 341
>SB_48410| Best HMM Match : Lig_chan (HMM E-Value=3.5e-05)
Length = 1084
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/90 (20%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Query: 85 QWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQPPLPSVANI--- 141
+W GMI DL KA+L + + R VV ++++ + R + ++
Sbjct: 443 RWYGMIGDLIDGKAELALTSLELSLAREEVVDFSNVPFIYHDRVIVMAVKSSYTSHDWFG 502
Query: 142 FYLPFTGRVWAAVAVCAMVYTAAIYWASKW 171
F PF+ +W +++ ++ K+
Sbjct: 503 FTKPFSTSLWITFGAASVILVIVVWIIDKY 532
>SB_1815| Best HMM Match : Lig_chan (HMM E-Value=1.4)
Length = 698
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/90 (20%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Query: 85 QWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQPPLPSVANI--- 141
+W GMI DL KA+L + + R VV ++++ + R + ++
Sbjct: 115 RWYGMIGDLIDGKAELALTSLELSLAREEVVDFSNVPFIYHDRVIVMAVKSSYTSHDWFG 174
Query: 142 FYLPFTGRVWAAVAVCAMVYTAAIYWASKW 171
F PF+ +W +++ ++ K+
Sbjct: 175 FTKPFSTSLWITFGAASVILVIVVWIIDKY 204
>SB_53136| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28)
Length = 934
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 15 RDVMGRPLTMA-NVIQDSNNTRYHLPREDALELQYDVIPK 53
R ++GR + N+IQ +NN ++H P+ D + + V PK
Sbjct: 300 RPILGRKACLGMNIIQYNNNDQFHKPQTDGATV-FTVDPK 338
>SB_35054| Best HMM Match : Lig_chan (HMM E-Value=1.2e-32)
Length = 496
Score = 28.7 bits (61), Expect = 6.3
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Query: 84 GQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQPPLPSVANIFY 143
GQW+G+I +L +AD+ + R VV +T + + S + +
Sbjct: 40 GQWNGLIGELLRGEADVAIADLTITDARSRVVDFTHPFLHVGMAILVAVYKNRSGWLVRF 99
Query: 144 L-PFTGRVWAAVAVCAMVYTAAIYW 167
L PF+ +W VAV A+ I W
Sbjct: 100 LEPFSTELW-IVAVAAVNIVFVILW 123
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.325 0.136 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,926,325
Number of Sequences: 59808
Number of extensions: 389445
Number of successful extensions: 880
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 862
Number of HSP's gapped (non-prelim): 21
length of query: 308
length of database: 16,821,457
effective HSP length: 82
effective length of query: 226
effective length of database: 11,917,201
effective search space: 2693287426
effective search space used: 2693287426
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 60 (28.3 bits)
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