GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001974-TA|BGIBMGA001974-PA|undefined
         (308 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       24   4.7  
DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        24   6.2  
EF519375-1|ABP68484.1|  493|Anopheles gambiae LRIM1 protein.           23   8.2  
EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.           23   8.2  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   8.2  

>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 230 YSANIVVLLQAPSNSITSLAQLAASKVTL-AANDV 263
           Y  N+ + +  P NS   L Q   SK+T    ND+
Sbjct: 177 YRQNVTMYIFMPMNSTRQLVQSMQSKITAERVNDI 211


>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 10/19 (52%), Positives = 10/19 (52%)

Query: 146 FTGRVWAAVAVCAMVYTAA 164
           F GR WAAV  C    T A
Sbjct: 4   FHGRRWAAVLCCVFALTIA 22


>EF519375-1|ABP68484.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 247 SLAQLAASKVTLAANDVDYNHFVFSLYKDPVRVMIHKRIDPETGNGQFYSLE 298
           +LA+LAAS  TL   ++ YN F++ + K  V     K +D  +    F  LE
Sbjct: 182 NLAELAASSDTLEHLNLQYN-FIYDV-KGQVVFAKLKTLDLSSNKLAFMGLE 231


>EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 247 SLAQLAASKVTLAANDVDYNHFVFSLYKDPVRVMIHKRIDPETGNGQFYSLE 298
           +LA+LAAS  TL   ++ YN F++ + K  V     K +D  +    F  LE
Sbjct: 182 NLAELAASSDTLEHLNLQYN-FIYDV-KGQVVFAKLKTLDLSSNKLAFMGLE 231


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 7   HRELFKRRRDVMGRPLTMANVIQDSNNTRYH 37
           HREL  R +  +   LT  N+I+  +  RY+
Sbjct: 933 HRELIIRLQHQVDEELTPENIIEVMSANRYN 963


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.325    0.136    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 309,818
Number of Sequences: 2123
Number of extensions: 12468
Number of successful extensions: 29
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 26
Number of HSP's gapped (non-prelim): 5
length of query: 308
length of database: 516,269
effective HSP length: 64
effective length of query: 244
effective length of database: 380,397
effective search space: 92816868
effective search space used: 92816868
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 48 (23.4 bits)