Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001974-TA|BGIBMGA001974-PA|undefined
(308 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U34661-1|AAA92006.1| 962|Caenorhabditis elegans ionotropic glut... 60 2e-09
L16559-2|AAA27933.3| 962|Caenorhabditis elegans Glutamate recep... 60 2e-09
AF318610-1|AAK01098.1| 396|Caenorhabditis elegans ionotropic gl... 55 7e-08
AC006637-5|AAM54176.2| 844|Caenorhabditis elegans Glutamate rec... 55 7e-08
Z75545-5|CAA99883.3| 836|Caenorhabditis elegans Hypothetical pr... 52 4e-07
AF318607-1|AAK01095.1| 398|Caenorhabditis elegans ionotropic gl... 52 4e-07
Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical pr... 52 7e-07
Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical p... 52 7e-07
AF318614-1|AAK01102.1| 433|Caenorhabditis elegans ionotropic gl... 52 7e-07
U39849-10|AAA81054.3| 951|Caenorhabditis elegans Glutamate rece... 47 1e-05
AF318608-1|AAK01096.1| 409|Caenorhabditis elegans ionotropic gl... 47 1e-05
U10438-16|AAO61447.1| 977|Caenorhabditis elegans Glutamate rece... 45 8e-05
U10438-15|AAA19090.3| 908|Caenorhabditis elegans Glutamate rece... 45 8e-05
AF318606-1|AAK01094.2| 977|Caenorhabditis elegans non-NMDA iono... 45 8e-05
U41547-1|AAA83192.2| 489|Caenorhabditis elegans Glutamate recep... 44 1e-04
AF318612-1|AAK01100.1| 406|Caenorhabditis elegans ionotropic gl... 44 1e-04
U97007-1|AAB52291.1| 932|Caenorhabditis elegans Glutamate recep... 40 0.002
AF318609-1|AAK01097.1| 425|Caenorhabditis elegans ionotropic gl... 40 0.002
U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glut... 38 0.007
AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type ion... 38 0.007
U51999-8|AAA96090.2| 465|Caenorhabditis elegans Glutamate recep... 38 0.012
AF318611-1|AAK01099.1| 436|Caenorhabditis elegans ionotropic gl... 38 0.012
Z72502-3|CAA96588.1| 423|Caenorhabditis elegans Hypothetical pr... 36 0.048
AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich ... 32 0.45
AF003386-7|AAB54258.2| 412|Caenorhabditis elegans Hypothetical ... 32 0.45
AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related... 32 0.45
Z82286-8|CAB05308.2| 487|Caenorhabditis elegans Hypothetical pr... 31 1.4
U41039-1|AAX88820.1| 297|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z83218-4|CAB05690.2| 706|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z75712-7|CAB00046.1| 208|Caenorhabditis elegans Hypothetical pr... 28 9.7
>U34661-1|AAA92006.1| 962|Caenorhabditis elegans ionotropic
glutamate receptor subunitprotein.
Length = 962
Score = 60.1 bits (139), Expect = 2e-09
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 13/204 (6%)
Query: 81 KVNGQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQPPLPSVAN 140
+ +G W GMI +L + +A + + ER VV ++ + + ++P +
Sbjct: 524 QADGSWDGMIGELLSGRAHAVVASLTINQERERVVDFSKPFMTTGISIMIKKPDKQEFSV 583
Query: 141 IFYL-PFTGRVWAAVAVCAMVYTAAIYWASK---WEFNLEKRSASQF----DGTVGDAML 192
++ P + +W + + + I+ S+ +E+ +E+ S F D +V + +
Sbjct: 584 FSFMQPLSTEIWMYIIFAYIGVSVVIFLVSRFSPYEWRVEETSRGGFTISNDFSVYNCLW 643
Query: 193 LTMSALSQQGCFIEPKRAPGRIMLFVLFTALMALYAAYSANIVVLL-----QAPSNSITS 247
T++A QQG I P+ GRI + M + ++Y+AN+ L QAP S+
Sbjct: 644 FTLAAFMQQGTDILPRSISGRIASSAWWFFTMIIVSSYTANLAAFLTLEKMQAPIESVED 703
Query: 248 LAQLAASKVTLAANDVDYNHFVFS 271
LA+ + K + + F +S
Sbjct: 704 LAKQSKIKYGIQGGGSTASFFKYS 727
>L16559-2|AAA27933.3| 962|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 1 protein.
Length = 962
Score = 60.1 bits (139), Expect = 2e-09
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 13/204 (6%)
Query: 81 KVNGQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQPPLPSVAN 140
+ +G W GMI +L + +A + + ER VV ++ + + ++P +
Sbjct: 524 QADGSWDGMIGELLSGRAHAVVASLTINQERERVVDFSKPFMTTGISIMIKKPDKQEFSV 583
Query: 141 IFYL-PFTGRVWAAVAVCAMVYTAAIYWASK---WEFNLEKRSASQF----DGTVGDAML 192
++ P + +W + + + I+ S+ +E+ +E+ S F D +V + +
Sbjct: 584 FSFMQPLSTEIWMYIIFAYIGVSVVIFLVSRFSPYEWRVEETSRGGFTISNDFSVYNCLW 643
Query: 193 LTMSALSQQGCFIEPKRAPGRIMLFVLFTALMALYAAYSANIVVLL-----QAPSNSITS 247
T++A QQG I P+ GRI + M + ++Y+AN+ L QAP S+
Sbjct: 644 FTLAAFMQQGTDILPRSISGRIASSAWWFFTMIIVSSYTANLAAFLTLEKMQAPIESVED 703
Query: 248 LAQLAASKVTLAANDVDYNHFVFS 271
LA+ + K + + F +S
Sbjct: 704 LAKQSKIKYGIQGGGSTASFFKYS 727
>AF318610-1|AAK01098.1| 396|Caenorhabditis elegans ionotropic
glutamate receptor GLR-6 protein.
Length = 396
Score = 54.8 bits (126), Expect = 7e-08
Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 10/191 (5%)
Query: 60 KLAFQM-LNATPRYTFSYRWGYKVNG--QWSGMINDLHTSKADLGTNCVVSDVERLSVVT 116
KLA + N T + ++G + NG +W GMI ++ AD+ + RL V+
Sbjct: 32 KLAEMLHFNYTLKIVKDNKYGERKNGTDEWDGMIGEILRGDADMAVAPITVTATRLEVID 91
Query: 117 YTDMLAPFRVRFVFRQPPLPSVANI--FYLPFTGRVWAAVAVCAMVYTAAIYWASKWEFN 174
+TD + + RQP S +++ F P + VW A+ A V TA + +
Sbjct: 92 FTDPFLQLGISMLMRQPNPKSSSSLTRFLWPLSASVWTFSAI-ATVITALLVTVAAVLSP 150
Query: 175 LEKRSASQFDGTVGDAMLLTMSALSQQGCFIEPKRAPGRIMLFVLFTALMALYAAYSANI 234
E + + +V + + + A S C + R++ V ++ + L A Y+AN
Sbjct: 151 KESTAEFKIQNSVWYLVCILLRAGSGYNC----QAGATRLISAVWWSFTLVLIAQYTANF 206
Query: 235 VVLLQAPSNSI 245
LL S+
Sbjct: 207 AALLTVDRKSM 217
>AC006637-5|AAM54176.2| 844|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 6, isoform a protein.
Length = 844
Score = 54.8 bits (126), Expect = 7e-08
Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 10/191 (5%)
Query: 60 KLAFQM-LNATPRYTFSYRWGYKVNG--QWSGMINDLHTSKADLGTNCVVSDVERLSVVT 116
KLA + N T + ++G + NG +W GMI ++ AD+ + RL V+
Sbjct: 444 KLAEMLHFNYTLKIVKDNKYGERKNGTDEWDGMIGEILRGDADMAVAPITVTATRLEVID 503
Query: 117 YTDMLAPFRVRFVFRQPPLPSVANI--FYLPFTGRVWAAVAVCAMVYTAAIYWASKWEFN 174
+TD + + RQP S +++ F P + VW A+ A V TA + +
Sbjct: 504 FTDPFLQLGISMLMRQPNPKSSSSLTRFLWPLSASVWTFSAI-ATVITALLVTVAAVLSP 562
Query: 175 LEKRSASQFDGTVGDAMLLTMSALSQQGCFIEPKRAPGRIMLFVLFTALMALYAAYSANI 234
E + + +V + + + A S C + R++ V ++ + L A Y+AN
Sbjct: 563 KESTAEFKIQNSVWYLVCILLRAGSGYNC----QAGATRLISAVWWSFTLVLIAQYTANF 618
Query: 235 VVLLQAPSNSI 245
LL S+
Sbjct: 619 AALLTVDRKSM 629
>Z75545-5|CAA99883.3| 836|Caenorhabditis elegans Hypothetical
protein K10D3.1 protein.
Length = 836
Score = 52.4 bits (120), Expect = 4e-07
Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 9/165 (5%)
Query: 83 NGQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQPPL-PSVANI 141
NG+WSGM+ +L ADL + R V+ +T + +F++P + S
Sbjct: 457 NGKWSGMVGELQRGDADLAVASLTISYGRSEVIDFTVPYMHLGISILFKKPRIRDSDWFK 516
Query: 142 FYLPFTGRVWAAVAVCAMVYTAAIYWASK------WEFNLEKRSASQFDG--TVGDAMLL 193
F P + +VW V + AI+ +K +E + + D ++ ++
Sbjct: 517 FMDPLSTQVWIMTFASYFVVSVAIWIIAKISPYEQFERDEDNGQYKPVDNQFSLRNSFWF 576
Query: 194 TMSALSQQGCFIEPKRAPGRIMLFVLFTALMALYAAYSANIVVLL 238
T+ +L QQG + P+ A R++ + + + L ++Y+AN+ +L
Sbjct: 577 TVCSLMQQGSELCPRAASTRLLTGIWWFFALILISSYTANLAAVL 621
>AF318607-1|AAK01095.1| 398|Caenorhabditis elegans ionotropic
glutamate receptor GLR-3 protein.
Length = 398
Score = 52.4 bits (120), Expect = 4e-07
Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 9/165 (5%)
Query: 83 NGQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQPPL-PSVANI 141
NG+WSGM+ +L ADL + R V+ +T + +F++P + S
Sbjct: 53 NGKWSGMVGELQRGDADLAVASLTISYGRSEVIDFTVPYMHLGISILFKKPRIRDSDWFK 112
Query: 142 FYLPFTGRVWAAVAVCAMVYTAAIYWASK------WEFNLEKRSASQFDG--TVGDAMLL 193
F P + +VW V + AI+ +K +E + + D ++ ++
Sbjct: 113 FMDPLSTQVWIMTFASYFVVSVAIWIIAKISPYEQFERDEDNGQYKPVDNQFSLRNSFWF 172
Query: 194 TMSALSQQGCFIEPKRAPGRIMLFVLFTALMALYAAYSANIVVLL 238
T+ +L QQG + P+ A R++ + + + L ++Y+AN+ +L
Sbjct: 173 TVCSLMQQGSELCPRAASTRLLTGIWWFFALILISSYTANLAAVL 217
>Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 51.6 bits (118), Expect = 7e-07
Identities = 37/167 (22%), Positives = 67/167 (40%), Gaps = 5/167 (2%)
Query: 77 RWGYKVNGQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQPPLP 136
+WG K W+G+I DL +KAD+ + + ER + ++ + + +
Sbjct: 374 KWGLKTENGWNGLIADLMHNKADMCVTSLKLNSERARDIDFSLPFLDTGISIIVKIRSGV 433
Query: 137 SVANIFYLPFTGRVWAAVA-VCAMVYTAAIY---WASKWEFNLEKRSASQFDGTVGDAML 192
F PF W + VC V +I+ W S + FN++K + ++ +
Sbjct: 434 LSPTAFLEPFEYSTWVIILFVCIHVAAISIFLFEWVSPYSFNMQKYPPPEHKFSLFRSYW 493
Query: 193 LTMSALSQQGCFIE-PKRAPGRIMLFVLFTALMALYAAYSANIVVLL 238
L + L + PK R+M V + A Y+AN+ +
Sbjct: 494 LVWATLFSASVSTDVPKSTVSRLMALVWAAFGLTFLAVYTANLAAFM 540
>Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 51.6 bits (118), Expect = 7e-07
Identities = 37/167 (22%), Positives = 67/167 (40%), Gaps = 5/167 (2%)
Query: 77 RWGYKVNGQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQPPLP 136
+WG K W+G+I DL +KAD+ + + ER + ++ + + +
Sbjct: 374 KWGLKTENGWNGLIADLMHNKADMCVTSLKLNSERARDIDFSLPFLDTGISIIVKIRSGV 433
Query: 137 SVANIFYLPFTGRVWAAVA-VCAMVYTAAIY---WASKWEFNLEKRSASQFDGTVGDAML 192
F PF W + VC V +I+ W S + FN++K + ++ +
Sbjct: 434 LSPTAFLEPFEYSTWVIILFVCIHVAAISIFLFEWVSPYSFNMQKYPPPEHKFSLFRSYW 493
Query: 193 LTMSALSQQGCFIE-PKRAPGRIMLFVLFTALMALYAAYSANIVVLL 238
L + L + PK R+M V + A Y+AN+ +
Sbjct: 494 LVWATLFSASVSTDVPKSTVSRLMALVWAAFGLTFLAVYTANLAAFM 540
>AF318614-1|AAK01102.1| 433|Caenorhabditis elegans ionotropic
glutamate receptor NMR-2 protein.
Length = 433
Score = 51.6 bits (118), Expect = 7e-07
Identities = 37/167 (22%), Positives = 67/167 (40%), Gaps = 5/167 (2%)
Query: 77 RWGYKVNGQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQPPLP 136
+WG K W+G+I DL +KAD+ + + ER + ++ + + +
Sbjct: 81 KWGLKTENGWNGLIADLMHNKADMCVTSLKLNSERARDIDFSLPFLDTGISIIVKIRSGV 140
Query: 137 SVANIFYLPFTGRVWAAVA-VCAMVYTAAIY---WASKWEFNLEKRSASQFDGTVGDAML 192
F PF W + VC V +I+ W S + FN++K + ++ +
Sbjct: 141 LSPTAFLEPFEYSTWVIILFVCIHVAAISIFLFEWVSPYSFNMQKYPPPEHKFSLFRSYW 200
Query: 193 LTMSALSQQGCFIE-PKRAPGRIMLFVLFTALMALYAAYSANIVVLL 238
L + L + PK R+M V + A Y+AN+ +
Sbjct: 201 LVWATLFSASVSTDVPKSTVSRLMALVWAAFGLTFLAVYTANLAAFM 247
>U39849-10|AAA81054.3| 951|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 4 protein.
Length = 951
Score = 47.2 bits (107), Expect = 1e-05
Identities = 42/187 (22%), Positives = 81/187 (43%), Gaps = 17/187 (9%)
Query: 83 NGQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQPPLPSVAN-- 140
+G+W+G+I L +ADL + V R VV +T + + + +
Sbjct: 464 SGRWNGIIGALQRHEADLSLSAVTITYSRAEVVDFTLPFMHLGISILLARTSEETDKGSL 523
Query: 141 -IFYLPFTGRVWAAVAVCAMVYTAAIYWASKWE----FNLEKRSASQFDG--------TV 187
F P + VW ++ + + + +++ +K+ +NLE+ F+ TV
Sbjct: 524 WTFLEPLSLTVWISLLISYCIVSYSMHILAKFSPYEWYNLERIDERDFENIKNQKNQFTV 583
Query: 188 GDAMLLTMSALSQQGCFIEPKRAPGRIMLFVLFTALMALYAAYSANIVVLL--QAPSNSI 245
++ TM +L QQG + P+ A R++ V + + ++Y+A + L + S I
Sbjct: 584 LNSFWFTMGSLMQQGSDVIPRAAATRLIAVVWWMFTQIIISSYTAQLAAFLTVERMSTPI 643
Query: 246 TSLAQLA 252
S LA
Sbjct: 644 ESTQDLA 650
>AF318608-1|AAK01096.1| 409|Caenorhabditis elegans ionotropic
glutamate receptor GLR-4 protein.
Length = 409
Score = 47.2 bits (107), Expect = 1e-05
Identities = 42/187 (22%), Positives = 81/187 (43%), Gaps = 17/187 (9%)
Query: 83 NGQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQPPLPSVAN-- 140
+G+W+G+I L +ADL + V R VV +T + + + +
Sbjct: 53 SGRWNGIIGALQRHEADLSLSAVTITYSRAEVVDFTLPFMHLGISILLARTSEETDKGSL 112
Query: 141 -IFYLPFTGRVWAAVAVCAMVYTAAIYWASKWE----FNLEKRSASQFDG--------TV 187
F P + VW ++ + + + +++ +K+ +NLE+ F+ TV
Sbjct: 113 WTFLEPLSLTVWISLLISYCIVSYSMHILAKFSPYEWYNLERIDERDFENIKNQKNQFTV 172
Query: 188 GDAMLLTMSALSQQGCFIEPKRAPGRIMLFVLFTALMALYAAYSANIVVLL--QAPSNSI 245
++ TM +L QQG + P+ A R++ V + + ++Y+A + L + S I
Sbjct: 173 LNSFWFTMGSLMQQGSDVIPRAAATRLIAVVWWMFTQIIISSYTAQLAAFLTVERMSTPI 232
Query: 246 TSLAQLA 252
S LA
Sbjct: 233 ESTQDLA 239
>U10438-16|AAO61447.1| 977|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 2, isoform b protein.
Length = 977
Score = 44.8 bits (101), Expect = 8e-05
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 12/193 (6%)
Query: 81 KVNGQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQPPLPSVAN 140
+ +G W GMI L AD+ + ER V ++ + + ++P N
Sbjct: 552 QADGSWDGMIGYLLNETADVAVAPLTITQERERAVDFSKPFMTTGISIMIKKPEKQEF-N 610
Query: 141 IFYL--PFTGRVWAAVAVCAMVYTAAIY---WASKWEFNLE-KRSASQFDG--TVGDAML 192
IF P +W + I+ W S +E +E KR T+ +++
Sbjct: 611 IFSFMEPLGMTIWIFTLSSYFGVSLTIFLVSWFSPYEKRIEFKRGEFTVTNEFTLYNSLW 670
Query: 193 LTMSALSQQGCFIEPKRAPGRIMLFVLFTALMALYAAYSANIV--VLLQAPSNSITSLAQ 250
T++A QQG I P+ GRI + + + ++Y+AN+ + L+ + I S+
Sbjct: 671 FTLAAFMQQGTDILPRAVSGRIASSCWWFFTLIIVSSYTANLAAFLTLERMTPPIESVED 730
Query: 251 LA-ASKVTLAAND 262
LA +K+ N+
Sbjct: 731 LANQNKILYGVNE 743
>U10438-15|AAA19090.3| 908|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 2, isoform a protein.
Length = 908
Score = 44.8 bits (101), Expect = 8e-05
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 12/193 (6%)
Query: 81 KVNGQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQPPLPSVAN 140
+ +G W GMI L AD+ + ER V ++ + + ++P N
Sbjct: 483 QADGSWDGMIGYLLNETADVAVAPLTITQERERAVDFSKPFMTTGISIMIKKPEKQEF-N 541
Query: 141 IFYL--PFTGRVWAAVAVCAMVYTAAIY---WASKWEFNLE-KRSASQFDG--TVGDAML 192
IF P +W + I+ W S +E +E KR T+ +++
Sbjct: 542 IFSFMEPLGMTIWIFTLSSYFGVSLTIFLVSWFSPYEKRIEFKRGEFTVTNEFTLYNSLW 601
Query: 193 LTMSALSQQGCFIEPKRAPGRIMLFVLFTALMALYAAYSANIV--VLLQAPSNSITSLAQ 250
T++A QQG I P+ GRI + + + ++Y+AN+ + L+ + I S+
Sbjct: 602 FTLAAFMQQGTDILPRAVSGRIASSCWWFFTLIIVSSYTANLAAFLTLERMTPPIESVED 661
Query: 251 LA-ASKVTLAAND 262
LA +K+ N+
Sbjct: 662 LANQNKILYGVNE 674
>AF318606-1|AAK01094.2| 977|Caenorhabditis elegans non-NMDA
ionotropic glutamate receptorsubunit GLR-2 protein.
Length = 977
Score = 44.8 bits (101), Expect = 8e-05
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 12/193 (6%)
Query: 81 KVNGQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQPPLPSVAN 140
+ +G W GMI L AD+ + ER V ++ + + ++P N
Sbjct: 552 QADGSWDGMIGYLLNETADVAVAPLTITQERERAVDFSKPFMTTGISIMIKKPEKQEF-N 610
Query: 141 IFYL--PFTGRVWAAVAVCAMVYTAAIY---WASKWEFNLE-KRSASQFDG--TVGDAML 192
IF P +W + I+ W S +E +E KR T+ +++
Sbjct: 611 IFSFMEPLGMTIWIFTLSSYFGVSLTIFLVSWFSPYEKRIEFKRGEFTVTNEFTLYNSLW 670
Query: 193 LTMSALSQQGCFIEPKRAPGRIMLFVLFTALMALYAAYSANIV--VLLQAPSNSITSLAQ 250
T++A QQG I P+ GRI + + + ++Y+AN+ + L+ + I S+
Sbjct: 671 FTLAAFMQQGTDILPRAVSGRIASSCWWFFTLIIVSSYTANLAAFLTLERMTPPIESVED 730
Query: 251 LA-ASKVTLAAND 262
LA +K+ N+
Sbjct: 731 LANQNKILYGVNE 743
>U41547-1|AAA83192.2| 489|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 8 protein.
Length = 489
Score = 44.0 bits (99), Expect = 1e-04
Identities = 33/170 (19%), Positives = 71/170 (41%), Gaps = 6/170 (3%)
Query: 78 WGYKVNGQWSGMINDLHTSKADLGTNCVVSDVER--LSVVTYTDMLAPFRVRFVFRQPPL 135
WG +NG W+G L + DL + + +R ++ +TY P + +
Sbjct: 63 WGEYLNGSWTGAFGQLVRGEVDLLAGGAIMEYDRSVIADLTYPFQFEPTGIMIRSPEKYE 122
Query: 136 PSVANIFYLPFTGRVWAAVAVCAMVYTAAIYWASKWEFNLEKRSASQFDGTVGDAMLLTM 195
I PF+ VW A ++ + I+ N+ ++ + T +++ +
Sbjct: 123 DDTLLIVTEPFSWEVWVITAAVILI-SGVIFLVMT---NIIRKVYEEMTVTPFESIWVFF 178
Query: 196 SALSQQGCFIEPKRAPGRIMLFVLFTALMALYAAYSANIVVLLQAPSNSI 245
S QQG +P+ R+++ + + A + L A ++ ++V L ++
Sbjct: 179 SIFVQQGLPEQPRSWSCRVLVALWWLASITLSATFTGSLVALFAVDKTNV 228
>AF318612-1|AAK01100.1| 406|Caenorhabditis elegans ionotropic
glutamate receptor GLR-8 protein.
Length = 406
Score = 44.0 bits (99), Expect = 1e-04
Identities = 33/170 (19%), Positives = 71/170 (41%), Gaps = 6/170 (3%)
Query: 78 WGYKVNGQWSGMINDLHTSKADLGTNCVVSDVER--LSVVTYTDMLAPFRVRFVFRQPPL 135
WG +NG W+G L + DL + + +R ++ +TY P + +
Sbjct: 55 WGEYLNGSWTGAFGQLVRGEVDLLAGGAIMEYDRSVIADLTYPFQFEPTGIMIRSPEKYE 114
Query: 136 PSVANIFYLPFTGRVWAAVAVCAMVYTAAIYWASKWEFNLEKRSASQFDGTVGDAMLLTM 195
I PF+ VW A ++ + I+ N+ ++ + T +++ +
Sbjct: 115 DDTLLIVTEPFSWEVWVITAAVILI-SGVIFLVMT---NIIRKVYEEMTVTPFESIWVFF 170
Query: 196 SALSQQGCFIEPKRAPGRIMLFVLFTALMALYAAYSANIVVLLQAPSNSI 245
S QQG +P+ R+++ + + A + L A ++ ++V L ++
Sbjct: 171 SIFVQQGLPEQPRSWSCRVLVALWWLASITLSATFTGSLVALFAVDKTNV 220
>U97007-1|AAB52291.1| 932|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 5 protein.
Length = 932
Score = 39.9 bits (89), Expect = 0.002
Identities = 39/197 (19%), Positives = 84/197 (42%), Gaps = 28/197 (14%)
Query: 83 NGQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQP--PLPSVAN 140
NG W GM+ ++ +A++ + + R V +T + +++ P P + +
Sbjct: 501 NGSWDGMMGEILRGEAEMAVAPLTVNYRRSEAVDFTKPFLSLGISILYKVPDDQQPDLFS 560
Query: 141 IFYLPFTGRVWAAVAVCAMVYTAAIYWASK---WEFNL--------EKRSASQF------ 183
F P + ++W A+A + T +Y+ + +E+NL E A+ F
Sbjct: 561 -FLNPLSWQIWTAIATSIITVTLGMYFVANVTPYEWNLNFSCCTAHEPHPAAAFATNQEA 619
Query: 184 ------DGTVGDAMLLTMSALSQQGCFIEPKRAPGRIMLFVLFTALMALYAAYSANI--V 235
+ + + + +S + + GC P+ R++ + + + +AY+AN+ V
Sbjct: 620 PIVMSNNYSFWNTVWYVLSTMLKGGCDFGPRAVSTRLLGGTWWVFYLVIISAYTANLAAV 679
Query: 236 VLLQAPSNSITSLAQLA 252
+ + P I +L LA
Sbjct: 680 LTVSRPYIPIKNLDDLA 696
>AF318609-1|AAK01097.1| 425|Caenorhabditis elegans ionotropic
glutamate receptor GLR-5 protein.
Length = 425
Score = 39.9 bits (89), Expect = 0.002
Identities = 39/197 (19%), Positives = 84/197 (42%), Gaps = 28/197 (14%)
Query: 83 NGQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQP--PLPSVAN 140
NG W GM+ ++ +A++ + + R V +T + +++ P P + +
Sbjct: 61 NGSWDGMMGEILRGEAEMAVAPLTVNYRRSEAVDFTKPFLSLGISILYKVPDDQQPDLFS 120
Query: 141 IFYLPFTGRVWAAVAVCAMVYTAAIYWASK---WEFNL--------EKRSASQF------ 183
F P + ++W A+A + T +Y+ + +E+NL E A+ F
Sbjct: 121 -FLNPLSWQIWTAIATSIITVTLGMYFVANVTPYEWNLNFSCCTAHEPHPAAAFATNQEA 179
Query: 184 ------DGTVGDAMLLTMSALSQQGCFIEPKRAPGRIMLFVLFTALMALYAAYSANI--V 235
+ + + + +S + + GC P+ R++ + + + +AY+AN+ V
Sbjct: 180 PIVMSNNYSFWNTVWYVLSTMLKGGCDFGPRAVSTRLLGGTWWVFYLVIISAYTANLAAV 239
Query: 236 VLLQAPSNSITSLAQLA 252
+ + P I +L LA
Sbjct: 240 LTVSRPYIPIKNLDDLA 256
>U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class
glutamate receptor protein1 protein.
Length = 1025
Score = 38.3 bits (85), Expect = 0.007
Identities = 40/184 (21%), Positives = 71/184 (38%), Gaps = 22/184 (11%)
Query: 87 SGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQPPLPSVANIFYLPF 146
SG+I +L AD+ + + ER +V +T+ +R + + P S F P
Sbjct: 505 SGVIGELDGDTADMAIGGITINPERERIVDFTEPWLYHGIRILEKNIPRDSPMQSFLQPL 564
Query: 147 TGRVWAAVAVCAMVYTAAIYWAS-------------------KWEFNLEKRSASQFDGTV 187
+W A+ + ++ AIY K EF L + +
Sbjct: 565 QSSLWTALFISVILVGLAIYCLDFKSPFERFYQADKEMEQDLKKEFELWIGKDADENVNF 624
Query: 188 GDAMLLTMSALSQQGCFIE-PKRAPGRIMLFVLFTALMALYAAYSANIV--VLLQAPSNS 244
G+AM L G + P+ R++ V M + A+Y+AN+ ++L P
Sbjct: 625 GEAMWFVWGVLLNSGVSEKTPRSCSARVLGIVWCGFCMIMVASYTANLAAFLVLDQPEKG 684
Query: 245 ITSL 248
+T +
Sbjct: 685 LTGV 688
>AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type
ionotropic glutamatereceptor NMR-1 protein.
Length = 1025
Score = 38.3 bits (85), Expect = 0.007
Identities = 40/184 (21%), Positives = 71/184 (38%), Gaps = 22/184 (11%)
Query: 87 SGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQPPLPSVANIFYLPF 146
SG+I +L AD+ + + ER +V +T+ +R + + P S F P
Sbjct: 505 SGVIGELDGDTADMAIGGITINPERERIVDFTEPWLYHGIRILEKNIPRDSPMQSFLQPL 564
Query: 147 TGRVWAAVAVCAMVYTAAIYWAS-------------------KWEFNLEKRSASQFDGTV 187
+W A+ + ++ AIY K EF L + +
Sbjct: 565 QSSLWTALFISVILVGLAIYCLDFKSPFERFYQADKEMEQDLKKEFELWIGKDADENVNF 624
Query: 188 GDAMLLTMSALSQQGCFIE-PKRAPGRIMLFVLFTALMALYAAYSANIV--VLLQAPSNS 244
G+AM L G + P+ R++ V M + A+Y+AN+ ++L P
Sbjct: 625 GEAMWFVWGVLLNSGVSEKTPRSCSARVLGIVWCGFCMIMVASYTANLAAFLVLDQPEKG 684
Query: 245 ITSL 248
+T +
Sbjct: 685 LTGV 688
>U51999-8|AAA96090.2| 465|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 7 protein.
Length = 465
Score = 37.5 bits (83), Expect = 0.012
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 12/181 (6%)
Query: 83 NGQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPF-RVRFVFRQPPLPSVANI 141
NG W+G+I L + AD+ + ER + V +T + ++ +
Sbjct: 71 NGNWNGLIGALVSGSADIALAPLSVMAERENDVDFTVPYYDLVGTTILMKKADVEYSLFK 130
Query: 142 FYLPFTGRVWAAVAVCAMVYTAAIYWA----SKWEF-NLEKRSASQFDG---TVGDAMLL 193
F VW + V A ++T+ + W S + F N ++R + + ++ + +
Sbjct: 131 FMKVLEWPVWLCI-VAAYLFTSILLWIFDRFSPYSFTNNKERYQNDIEKRQFSLKECLWF 189
Query: 194 TMSALSQQGCFIEPKRAPGRIMLFVLFTALMALYAAYSANIVVLLQAP--SNSITSLAQL 251
M++L+ QG PK GR++ + + A+Y+AN+ L I+SL L
Sbjct: 190 CMTSLTPQGGGEAPKNISGRLVAATWWLFGFIIIASYTANLAAFLTVSRLEQPISSLDDL 249
Query: 252 A 252
A
Sbjct: 250 A 250
>AF318611-1|AAK01099.1| 436|Caenorhabditis elegans ionotropic
glutamate receptor GLR-7 protein.
Length = 436
Score = 37.5 bits (83), Expect = 0.012
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 12/181 (6%)
Query: 83 NGQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPF-RVRFVFRQPPLPSVANI 141
NG W+G+I L + AD+ + ER + V +T + ++ +
Sbjct: 55 NGNWNGLIGALVSGSADIALAPLSVMAERENDVDFTVPYYDLVGTTILMKKADVEYSLFK 114
Query: 142 FYLPFTGRVWAAVAVCAMVYTAAIYWA----SKWEF-NLEKRSASQFDG---TVGDAMLL 193
F VW + V A ++T+ + W S + F N ++R + + ++ + +
Sbjct: 115 FMKVLEWPVWLCI-VAAYLFTSILLWIFDRFSPYSFTNNKERYQNDIEKRQFSLKECLWF 173
Query: 194 TMSALSQQGCFIEPKRAPGRIMLFVLFTALMALYAAYSANIVVLLQAP--SNSITSLAQL 251
M++L+ QG PK GR++ + + A+Y+AN+ L I+SL L
Sbjct: 174 CMTSLTPQGGGEAPKNISGRLVAATWWLFGFIIIASYTANLAAFLTVSRLEQPISSLDDL 233
Query: 252 A 252
A
Sbjct: 234 A 234
>Z72502-3|CAA96588.1| 423|Caenorhabditis elegans Hypothetical
protein C08B6.5 protein.
Length = 423
Score = 35.5 bits (78), Expect = 0.048
Identities = 34/167 (20%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 83 NGQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFRQPPLPSVANIF 142
+G +SG++ L K D+ + R+ +T + F+ ++ ++P N
Sbjct: 48 DGNFSGIMGLLAQDKIDMSGLSMRITPARMEFAHFTFPIRYFQQVYIIKRPAENDFRNFV 107
Query: 143 YLPFTGRVW-----AAVAVCAMVYTAAIYWASKWEFNLEKRSASQFDGTVGDAMLLTMSA 197
+ PFT +W + M + A+YW + R S+F+ ++L T
Sbjct: 108 FAPFTTDMWLLLLATIMGASTMRFACALYW--------DSRVGSKFN-IYTSSVLETFGL 158
Query: 198 LSQQGCFIEPKRAPGRIMLFVLFTALMALYAAYSANIVVLLQAPSNS 244
+ +Q +P ++ L A+M++ Y ++ L AP +S
Sbjct: 159 MLKQR-VQDPTAVSTMLLEGFLIVAMMSIAQYYQTSMNSRLTAPPSS 204
>AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich
repeats, ras-likedomain, kinase protein 1 protein.
Length = 2395
Score = 32.3 bits (70), Expect = 0.45
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 235 VVLLQAPSNSITSLAQLAASKVTLAANDVDYNHFVFSLYK-DPVRVMIHKRIDPETGNG 292
+++L +NS+TSL +A L D+ YN S + P+ V+ H + P T NG
Sbjct: 745 LLILNMSNNSMTSLPPMACVPAHLRTLDLSYNKIQESFIEASPLHVVCH-AVPPTTSNG 802
>AF003386-7|AAB54258.2| 412|Caenorhabditis elegans Hypothetical
protein F59E12.8 protein.
Length = 412
Score = 32.3 bits (70), Expect = 0.45
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 89 MINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVRFVFR-QPPLPSVANIF-YLPF 146
M+ D+ + D+ +R +V+T+T F V V+ P SV +F + PF
Sbjct: 1 MLGDIQKGRIDMACGRFRMTADRANVLTFT-YPTQFEVNQVYLITDPQKSVDVVFLFHPF 59
Query: 147 TGRVWAAVAVCAMVYTAAIYWASKWEFNLEKRSASQFD 184
+ VW +++ +V + EF K + S ++
Sbjct: 60 STTVWLLLSLTVLVVAIVFFILRFVEFKSTKETESSYE 97
>AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related
kinase protein.
Length = 2393
Score = 32.3 bits (70), Expect = 0.45
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 235 VVLLQAPSNSITSLAQLAASKVTLAANDVDYNHFVFSLYK-DPVRVMIHKRIDPETGNG 292
+++L +NS+TSL +A L D+ YN S + P+ V+ H + P T NG
Sbjct: 743 LLILNMSNNSMTSLPPMACVPAHLRTLDLSYNKIQESFIEASPLHVVCH-AVPPTTSNG 800
>Z82286-8|CAB05308.2| 487|Caenorhabditis elegans Hypothetical
protein W02A2.5 protein.
Length = 487
Score = 30.7 bits (66), Expect = 1.4
Identities = 30/114 (26%), Positives = 43/114 (37%), Gaps = 3/114 (2%)
Query: 69 TPRYTFSYRWG-YKVNGQWSGMINDLHTSKADLGTNCVVSDVERLSVVTYTDMLAPFRVR 127
TP WG + NG WSG++ L AD R Y+ + +
Sbjct: 60 TPTIVGGLDWGTLQKNGTWSGVLGYLQNGTADAVALMYQKTDTRNEYFEYSYPVTNVQPV 119
Query: 128 FVFRQ--PPLPSVANIFYLPFTGRVWAAVAVCAMVYTAAIYWASKWEFNLEKRS 179
FV R+ L SV + PF+ VW + ++ + S EF L RS
Sbjct: 120 FVARKKTETLGSVLWNAFKPFSVEVWLCLLASLVLNLLIMIAISGIEFKLLFRS 173
>U41039-1|AAX88820.1| 297|Caenorhabditis elegans Hypothetical
protein ZK867.2 protein.
Length = 297
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 51 IPKICWMTAKLAFQMLNATPRYTFSYRWGYKV-NGQWSGMINDLHTSKAD-LGTNCVVSD 108
I K+ + + + M++ ++ Y +G K NG WSGMI L + + D +G + ++
Sbjct: 33 ILKMIFRLIGVNYTMIDVWKKFGQQYDFGSKQKNGNWSGMIGLLQSDQLDMIGLSMRIAP 92
Query: 109 VERLSVVTYT 118
ER VV ++
Sbjct: 93 -EREEVVLFS 101
>Z83218-4|CAB05690.2| 706|Caenorhabditis elegans Hypothetical
protein C31A11.7 protein.
Length = 706
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 142 FYLPFTGRVWAAVAVCAMVYTAAIYWASKWEFNLEK 177
FY F ++ AV C + Y A +W+S +E + K
Sbjct: 632 FYSTFQVFIYYAVPACLLSYIFAFFWSSLFEIPILK 667
>Z75712-7|CAB00046.1| 208|Caenorhabditis elegans Hypothetical
protein K04G2.9 protein.
Length = 208
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/39 (33%), Positives = 16/39 (41%)
Query: 55 CWMTAKLAFQMLNATPRYTFSYRWGYKVNGQWSGMINDL 93
CW A L F ++ A S Y G WS ND+
Sbjct: 117 CWREADLLFNVICAVLFIVLSIVEAYYSTGSWSNNCNDI 155
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.325 0.136 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,309,461
Number of Sequences: 27539
Number of extensions: 287352
Number of successful extensions: 745
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 700
Number of HSP's gapped (non-prelim): 34
length of query: 308
length of database: 12,573,161
effective HSP length: 81
effective length of query: 227
effective length of database: 10,342,502
effective search space: 2347747954
effective search space used: 2347747954
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 59 (27.9 bits)
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