GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001973-TA|BGIBMGA001973-PA|IPR008934|Acid
phosphatase/vanadium-dependent haloperoxidase,
IPR000326|Phosphoesterase, PA-phosphatase related
         (134 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   1.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   2.9  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    20   6.7  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    20   8.9  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
          protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 6/10 (60%), Positives = 10/10 (100%)

Query: 67 SEYIESYTCT 76
          ++Y++SYTCT
Sbjct: 1  NQYVDSYTCT 10


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 2/27 (7%)

Query: 11  NKRIKPKDQALYWYREYLF--GVLLNL 35
           NKR++PK    Y  RE +   GVL  L
Sbjct: 834 NKRLEPKGDNRYTIREEILANGVLSGL 860


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory
          receptor candidate 28 protein.
          Length = 248

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 7/23 (30%), Positives = 14/23 (60%)

Query: 35 LITIQLMKSIVGSPRPHFFDTCS 57
          ++TI+   +++  P+P F  T S
Sbjct: 12 VLTIEASDAVLAYPQPSFHQTFS 34


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 7/24 (29%), Positives = 12/24 (50%)

Query: 108 LCKNFDCSVSDEEAENLKNGTGAY 131
           +  N+D    D+  E + N  G+Y
Sbjct: 603 MISNYDDDKIDQSTEGVCNDAGSY 626


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.134    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,966
Number of Sequences: 317
Number of extensions: 1356
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 134
length of database: 114,650
effective HSP length: 51
effective length of query: 83
effective length of database: 98,483
effective search space:  8174089
effective search space used:  8174089
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.9 bits)
S2: 39 (19.8 bits)