Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001973-TA|BGIBMGA001973-PA|IPR008934|Acid
phosphatase/vanadium-dependent haloperoxidase,
IPR000326|Phosphoesterase, PA-phosphatase related
(134 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0257 + 2097785-2097797,2098080-2098189,2098299-2098392,209... 44 3e-05
01_06_0173 - 27221738-27221883,27222009-27222197,27222424-272225... 44 5e-05
05_07_0019 - 27090791-27090945,27091775-27091963,27092635-270926... 41 3e-04
09_02_0373 - 8098060-8098229,8098316-8098375,8098486-8098674,809... 31 0.41
04_04_1445 - 33658355-33658417,33658536-33658669,33659056-336591... 29 1.3
01_06_0348 + 28598822-28599055,28599146-28599233,28599322-285993... 28 2.2
06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,831... 28 2.9
02_05_0213 + 26815889-26816475,26817718-26817788,26817985-268180... 28 2.9
01_03_0030 - 11787280-11787393,11787487-11787714,11788828-117889... 27 6.7
07_01_0998 - 8414492-8415175 26 8.9
>01_01_0257 +
2097785-2097797,2098080-2098189,2098299-2098392,
2098786-2098974,2099061-2099120,2099231-2099391
Length = 208
Score = 44.4 bits (100), Expect = 3e-05
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 28 LFGVLLNLITIQLMKSIVGSPRPHFFDTCSPKEALTCEGSEYIESYTC-TKAHWLNQSDR 86
L+ VL+ + ++K+ VG PRP FF C P + + C + +L +
Sbjct: 7 LYSVLITAVVTTVVKNAVGRPRPDFFWRCFPDGKQLYD--QVTGDVICHGEKSFLKDGRK 64
Query: 87 SFPSGHTSLAFHAAIYLAI 105
SFPSGHTS +F +L++
Sbjct: 65 SFPSGHTSWSFAGLGFLSL 83
>01_06_0173 -
27221738-27221883,27222009-27222197,27222424-27222517,
27222647-27222756,27222849-27222936,27223046-27223279
Length = 286
Score = 43.6 bits (98), Expect = 5e-05
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 28 LFGVLLNLITIQLMKSIVGSPRPHFFDTCSPKEALTCEGSEYIESYTCTKAHWLNQSDRS 87
LF VL+ + +K VG PRP+FF C P + + + A + + +S
Sbjct: 110 LFSVLITGVLTDAIKDAVGRPRPNFFWRCFP-DGIAVFDNVTTGVICHGDASVIKEGHKS 168
Query: 88 FPSGHTSLAFHAAIYLA 104
FPSGHTS +F +L+
Sbjct: 169 FPSGHTSWSFAGLGFLS 185
>05_07_0019 -
27090791-27090945,27091775-27091963,27092635-27092694,
27092793-27092981,27093116-27093209,27093319-27093428,
27093657-27093969
Length = 369
Score = 41.1 bits (92), Expect = 3e-04
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 28 LFGVLLNLITIQLMKSIVGSPRPHFFDTCSPKEALTCEGSEYIESYTC-TKAHWLNQSDR 86
LF VL+ + +K VG PRP+FF C P + + + + C + + +
Sbjct: 107 LFSVLITAVLTDAIKDGVGRPRPNFFWRCFP-DGIP-KYNNITRGVICHGDKSVIKEGHK 164
Query: 87 SFPSGHTSLAFHAAIYLA 104
SFPSGHTS +F +L+
Sbjct: 165 SFPSGHTSWSFAGLGFLS 182
>09_02_0373 -
8098060-8098229,8098316-8098375,8098486-8098674,
8098994-8099108,8099374-8099427,8099600-8099709,
8099792-8099879,8099969-8100181
Length = 332
Score = 30.7 bits (66), Expect = 0.41
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 28 LFGVLLNLITIQLMKSIVGSPRPHFFDTCSP 58
L+ VL+ + +K VG PRP FF C P
Sbjct: 103 LYSVLITAVITDAIKDGVGRPRPDFFWRCFP 133
>04_04_1445 -
33658355-33658417,33658536-33658669,33659056-33659116,
33659197-33659356,33660032-33660081,33662237-33662290,
33662630-33662704,33662821-33662949,33663065-33663152,
33663266-33663372,33663513-33663561,33663657-33663760,
33663941-33663980,33664409-33664659,33664674-33664686,
33665846-33666355,33666437-33667657,33667973-33668221,
33668305-33668531
Length = 1194
Score = 29.1 bits (62), Expect = 1.3
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 65 EGSEYIESYTCTKAHWLNQSDRSFPSGHTSLAFHAAIYLAIRNLCKN 111
EG +I + T+ HW + +S TSL F +++AIR L KN
Sbjct: 568 EGFTHIALHCWTEKHWSSPFVKSQEEARTSL-FALLLHVAIRLLSKN 613
>01_06_0348 +
28598822-28599055,28599146-28599233,28599322-28599377,
28599538-28599631,28599824-28599865,28599941-28600012,
28600134-28600193,28600490-28600683
Length = 279
Score = 28.3 bits (60), Expect = 2.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 77 KAHWLNQSDRSFPSGHTSLAFHAAIYLA 104
KA + + +SFPSGHTS +F +L+
Sbjct: 140 KASVIKEGHKSFPSGHTSWSFAGLGFLS 167
>06_01_1052 +
8312752-8312862,8312969-8313041,8313285-8313362,
8313443-8313523,8313706-8313779,8313865-8313919,
8314031-8314079,8314222-8314359,8314455-8314536,
8315131-8315209,8315357-8315400,8315479-8315673,
8316110-8316185,8317427-8317507,8317623-8317703,
8318128-8318204,8318402-8318499,8318672-8318809,
8319397-8319478,8319564-8319642,8319885-8319931,
8320014-8320228,8320330-8320450,8320529-8320648,
8320731-8320849,8320964-8321036,8321112-8321231,
8321538-8321606,8321756-8321926,8322004-8322051,
8322192-8322333,8323244-8323341,8323684-8323828,
8323928-8324013,8324112-8324222,8324456-8324530,
8324836-8324901,8325036-8325224,8325315-8325425,
8326616-8326696,8327192-8327371
Length = 1385
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/36 (38%), Positives = 17/36 (47%)
Query: 73 YTCTKAHWLNQSDRSFPSGHTSLAFHAAIYLAIRNL 108
YT H++ SDR P+G T A AA NL
Sbjct: 785 YTIDDIHYVADSDRLIPAGETEFAKDAAFGYKSSNL 820
>02_05_0213 +
26815889-26816475,26817718-26817788,26817985-26818073,
26818910-26818991,26819089-26819204,26819290-26819451,
26819531-26819680,26819969-26820037,26820375-26820491
Length = 480
Score = 27.9 bits (59), Expect = 2.9
Identities = 12/18 (66%), Positives = 14/18 (77%)
Query: 87 SFPSGHTSLAFHAAIYLA 104
SFPSGH+S AF A +LA
Sbjct: 127 SFPSGHSSRAFLVAAFLA 144
>01_03_0030 -
11787280-11787393,11787487-11787714,11788828-11788916,
11789516-11789763,11789858-11790146,11790295-11790454,
11791228-11791404
Length = 434
Score = 26.6 bits (56), Expect = 6.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 81 LNQSDRSFPSGHTSLAFHAAIYLAIRNLCKNFDCSVSD 118
LN+ D + PSG S+ A+R+L K + ++SD
Sbjct: 110 LNRVDAANPSGEGSVPSGTLSTPAVRHLAKQYGLNISD 147
>07_01_0998 - 8414492-8415175
Length = 227
Score = 26.2 bits (55), Expect = 8.9
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 81 LNQSDRSFPSGHTSLAFHAAIYLAIRNLCKNFDCSVSD 118
L + + S PS T+LA++ ++ LA+RN KN+ S+ +
Sbjct: 72 LTRFNLSSPSEATALAYNLSLTLAVRN--KNWAMSIKN 107
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.320 0.134 0.417
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,121,094
Number of Sequences: 37544
Number of extensions: 158792
Number of successful extensions: 254
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 243
Number of HSP's gapped (non-prelim): 10
length of query: 134
length of database: 14,793,348
effective HSP length: 75
effective length of query: 59
effective length of database: 11,977,548
effective search space: 706675332
effective search space used: 706675332
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 55 (26.2 bits)
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