GeneModel BLAST Result against nematostella

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001973-TA|BGIBMGA001973-PA|IPR008934|Acid
phosphatase/vanadium-dependent haloperoxidase,
IPR000326|Phosphoesterase, PA-phosphatase related
         (134 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_36347| Best HMM Match : No HMM Matches (HMM E-Value=.)              53   9e-08
SB_5982| Best HMM Match : PAP2 (HMM E-Value=8.3e-19)                   39   0.002
SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07)        31   0.24 
SB_53811| Best HMM Match : Mab-21 (HMM E-Value=0.003)                  28   2.3  
SB_45709| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.2  
SB_10929| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.2  

>SB_36347| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 454

 Score = 52.8 bits (121), Expect = 9e-08
 Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 1/71 (1%)

Query: 27  YLFGVLLNLITIQLMKSIVGSPRPHFFDTCSPKEALTCEGSEYIESYTCT-KAHWLNQSD 85
           +LFG  +N +   + K  VG  RPHF   C P  +L    +E+I S  CT     + Q+ 
Sbjct: 149 FLFGAAVNTLLTDVGKYSVGRLRPHFLTVCKPDTSLFNCTTEFITSVVCTGDPAIIRQAR 208

Query: 86  RSFPSGHTSLA 96
            SFPSGH+S A
Sbjct: 209 LSFPSGHSSFA 219



 Score = 51.2 bits (117), Expect = 3e-07
 Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 1/71 (1%)

Query: 27  YLFGVLLNLITIQLMKSIVGSPRPHFFDTCSPKEALTCEGSEYIESYTCT-KAHWLNQSD 85
           +LFG  +N +   + K  VG  RPHF   C P  +L    +E+I S  CT     + ++ 
Sbjct: 379 FLFGAAVNTLLTDVGKYSVGRLRPHFLTMCKPDTSLFNCTTEFITSVVCTGDPAIIREAR 438

Query: 86  RSFPSGHTSLA 96
            SFPSGH+S A
Sbjct: 439 LSFPSGHSSFA 449


>SB_5982| Best HMM Match : PAP2 (HMM E-Value=8.3e-19)
          Length = 320

 Score = 38.7 bits (86), Expect = 0.002
 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 1/80 (1%)

Query: 27  YLFGVLLNLITIQLMKSIVGSPRPHFFDTCSPKEALTCEGSEYIESYTCT-KAHWLNQSD 85
           +L+G+ L  +   ++  + G   P+F   C P   L      YI    CT  A  + ++ 
Sbjct: 125 FLYGIPLLFLIFNVVSVMTGRLTPNFLAVCKPNTTLFDCNEGYITKDVCTGDALDVKRAR 184

Query: 86  RSFPSGHTSLAFHAAIYLAI 105
            SFPS +T +A +  +++A+
Sbjct: 185 LSFPSVNTLVAMYCMVFVAL 204


>SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07)
          Length = 1128

 Score = 31.5 bits (68), Expect = 0.24
 Identities = 13/24 (54%), Positives = 17/24 (70%)

Query: 67  SEYIESYTCTKAHWLNQSDRSFPS 90
           +E   SYT  KA+W N++DRSF S
Sbjct: 889 TEIWASYTADKAYWRNKADRSFTS 912


>SB_53811| Best HMM Match : Mab-21 (HMM E-Value=0.003)
          Length = 700

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 14  IKPKDQALYWYREYLFGVLLNLITIQLMKSIVGSPRPHFF 53
           IK KD   YW+R+ L    L  ITI L  ++     PH++
Sbjct: 261 IKTKDSPGYWHRDLLGDRFLEFITI-LHNALRDKSLPHYW 299


>SB_45709| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1112

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)

Query: 56  CSPKEALTCEGSEY-IESYTCTKAHWL 81
           CSP   +TC+ S++   +  C KA WL
Sbjct: 122 CSPTARMTCDPSQHTCNNGQCIKASWL 148


>SB_10929| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 636

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 14/62 (22%), Positives = 30/62 (48%)

Query: 1   MLIVERKYHTNKRIKPKDQALYWYREYLFGVLLNLITIQLMKSIVGSPRPHFFDTCSPKE 60
           +L +  K++  K +KP+ +  ++ R Y   V+ N+  ++ +   +  P     DT    +
Sbjct: 487 ILSLANKHYPVKILKPQRKNQWFDRPYCVHVVKNIAYLKGLNQSIQQPHGEHIDTSEKAD 546

Query: 61  AL 62
           AL
Sbjct: 547 AL 548


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.320    0.134    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,901,863
Number of Sequences: 59808
Number of extensions: 184885
Number of successful extensions: 285
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 278
Number of HSP's gapped (non-prelim): 7
length of query: 134
length of database: 16,821,457
effective HSP length: 75
effective length of query: 59
effective length of database: 12,335,857
effective search space: 727815563
effective search space used: 727815563
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 55 (26.2 bits)