GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001973-TA|BGIBMGA001973-PA|IPR008934|Acid
phosphatase/vanadium-dependent haloperoxidase,
IPR000326|Phosphoesterase, PA-phosphatase related
         (134 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   1.5  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   4.6  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   6.0  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   6.0  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    20   8.0  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)

Query: 11  NKRIKPKDQALYWYREYLF--GVLLNL 35
           NKR+ PK  + Y  RE +   GVL +L
Sbjct: 814 NKRLDPKSDSRYTIREEILANGVLSDL 840


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 13/41 (31%), Positives = 18/41 (43%)

Query: 28  LFGVLLNLITIQLMKSIVGSPRPHFFDTCSPKEALTCEGSE 68
           LF  L  L  + L  + + S  P  F  CS  + L   G+E
Sbjct: 402 LFNGLFVLNRLTLSGNAIASIDPLAFRNCSDLKELDLSGNE 442


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 17  KDQALYWYREYLFGVLLNL 35
           KDQA +  RE   G++ N+
Sbjct: 397 KDQASFLERERFLGIINNI 415


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 17  KDQALYWYREYLFGVLLNL 35
           KDQA +  RE   G++ N+
Sbjct: 397 KDQASFLERERFLGIINNI 415


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 7/19 (36%), Positives = 10/19 (52%)

Query: 40  LMKSIVGSPRPHFFDTCSP 58
           ++  +VG    HFFD   P
Sbjct: 234 ILPDLVGKKITHFFDLVRP 252


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.134    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,528
Number of Sequences: 429
Number of extensions: 1613
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 134
length of database: 140,377
effective HSP length: 52
effective length of query: 82
effective length of database: 118,069
effective search space:  9681658
effective search space used:  9681658
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.4 bits)
S2: 40 (20.2 bits)