GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001971-TA|BGIBMGA001971-PA|undefined
         (55 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   0.74 
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   0.74 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    19   5.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    19   5.2  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    19   5.2  
DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    18   9.1  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 0.74
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 1   MKMNNKFIN-VALRSMAQVETASQPALSGVPAVEMQAKHSVLWHLLIDLPI 50
           MK   + +N V+    +  ETAS  +   V +    A H ++  LL   PI
Sbjct: 141 MKHKKEQMNKVSTPRSSPAETASSLSPQSVASTASSADHQIVDRLLSHAPI 191


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 0.74
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 1   MKMNNKFIN-VALRSMAQVETASQPALSGVPAVEMQAKHSVLWHLLIDLPI 50
           MK   + +N V+    +  ETAS  +   V +    A H ++  LL   PI
Sbjct: 132 MKHKKEQMNKVSTPRSSPAETASSLSPQSVASTASSADHQIVDRLLSHAPI 182


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 18.6 bits (36), Expect = 5.2
 Identities = 7/18 (38%), Positives = 10/18 (55%)

Query: 30  PAVEMQAKHSVLWHLLID 47
           PAV+++      WH  ID
Sbjct: 390 PAVDLRDPLFFRWHAYID 407


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc
          finger protein protein.
          Length = 456

 Score = 18.6 bits (36), Expect = 5.2
 Identities = 7/20 (35%), Positives = 11/20 (55%)

Query: 18 VETASQPALSGVPAVEMQAK 37
          V+ A  P+L G P   + A+
Sbjct: 24 VKAAEHPSLRGTPLAMLAAQ 43


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory
          receptor candidate 3 protein.
          Length = 398

 Score = 18.6 bits (36), Expect = 5.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)

Query: 3  MNNKFINVALRSMAQ 17
          MNNK   V ++SM Q
Sbjct: 1  MNNKLNMVLVKSMLQ 15


>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
          protein 8 protein.
          Length = 99

 Score = 17.8 bits (34), Expect = 9.1
 Identities = 5/13 (38%), Positives = 9/13 (69%)

Query: 34 MQAKHSVLWHLLI 46
          +Q KH  +W+ L+
Sbjct: 82 VQTKHPDVWNALV 94


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.131    0.372 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,481
Number of Sequences: 317
Number of extensions: 185
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 55
length of database: 114,650
effective HSP length: 35
effective length of query: 20
effective length of database: 103,555
effective search space:  2071100
effective search space used:  2071100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.7 bits)
S2: 34 (17.8 bits)