Silkworm BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001970-TA|BGIBMGA001970-PA|undefined
         (184 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-560|AAN11529.1| 1035|Drosophila melanogaster CG14955-PB...    30   2.2  
AE014296-559|AAF47715.2|  938|Drosophila melanogaster CG14955-PA...    30   2.2  

>AE014296-560|AAN11529.1| 1035|Drosophila melanogaster CG14955-PB,
           isoform B protein.
          Length = 1035

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 18/73 (24%), Positives = 33/73 (45%)

Query: 25  TEKIGTRLNLFQLALSRKNLASHVKVSLGSIGTPLPITSERFIGKTIERVWKLTDAFMYT 84
           T K+ +  N  +  ++ KN A H++     +  PL    +R I +  +  W L+  +   
Sbjct: 541 TRKLESLANKVEPGVTLKNQAIHLRAYQKHLCVPLAAIVQRLIKRLKQMDWLLSGGYGSF 600

Query: 85  LKYLGGSQDECSQ 97
           +KYL    D+  Q
Sbjct: 601 VKYLHHLLDKIKQ 613


>AE014296-559|AAF47715.2|  938|Drosophila melanogaster CG14955-PA,
           isoform A protein.
          Length = 938

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 18/73 (24%), Positives = 33/73 (45%)

Query: 25  TEKIGTRLNLFQLALSRKNLASHVKVSLGSIGTPLPITSERFIGKTIERVWKLTDAFMYT 84
           T K+ +  N  +  ++ KN A H++     +  PL    +R I +  +  W L+  +   
Sbjct: 444 TRKLESLANKVEPGVTLKNQAIHLRAYQKHLCVPLAAIVQRLIKRLKQMDWLLSGGYGSF 503

Query: 85  LKYLGGSQDECSQ 97
           +KYL    D+  Q
Sbjct: 504 VKYLHHLLDKIKQ 516


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.325    0.138    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,907,560
Number of Sequences: 52641
Number of extensions: 296733
Number of successful extensions: 661
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 659
Number of HSP's gapped (non-prelim): 2
length of query: 184
length of database: 24,830,863
effective HSP length: 81
effective length of query: 103
effective length of database: 20,566,942
effective search space: 2118395026
effective search space used: 2118395026
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 59 (27.9 bits)