Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001969-TA|BGIBMGA001969-PA|IPR000884|Thrombospondin,
type I, IPR006025|Peptidase M, neutral zinc metallopeptidases,
zinc-binding site, IPR001590|Peptidase M12B, ADAM/reprolysin
(754 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42846-1|AAA83600.2| 872|Caenorhabditis elegans Hypothetical pr... 217 3e-56
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr... 186 4e-47
Z50004-3|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr... 186 4e-47
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein. 186 4e-47
U29378-9|AAP40541.1| 975|Caenorhabditis elegans Adamts family p... 173 5e-43
U29378-8|AAA68721.4| 1020|Caenorhabditis elegans Adamts family p... 173 5e-43
AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like p... 173 5e-43
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 103 6e-22
Z69360-9|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical pr... 103 6e-22
Z74037-5|CAA98493.3| 509|Caenorhabditis elegans Hypothetical pr... 65 2e-10
AB044562-1|BAA96734.1| 509|Caenorhabditis elegans MIG-17 protein. 65 2e-10
Z81460-5|CAB03832.1| 952|Caenorhabditis elegans Hypothetical pr... 44 3e-04
Z70209-3|CAA94147.1| 952|Caenorhabditis elegans Hypothetical pr... 44 3e-04
U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 prepropro... 38 0.026
AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical... 38 0.026
Z96047-6|CAB09416.1| 922|Caenorhabditis elegans Hypothetical pr... 33 0.98
AF024614-1|AAB97161.1| 922|Caenorhabditis elegans ADAM 10 protein. 33 0.98
Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical pr... 31 2.3
L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome cond... 31 2.3
U27312-14|AAA68257.2| 276|Caenorhabditis elegans Hypothetical p... 31 4.0
AC006749-2|AAF60533.3| 731|Caenorhabditis elegans Hypothetical ... 30 5.2
U88182-2|AAB42308.4| 961|Caenorhabditis elegans Patched related... 30 6.9
AF040648-3|AAL06034.2| 453|Caenorhabditis elegans Hypothetical ... 29 9.2
AF040648-1|AAK21412.1| 519|Caenorhabditis elegans Hypothetical ... 29 9.2
AB007816-1|BAA28352.1| 394|Caenorhabditis elegans matrix metall... 29 9.2
>U42846-1|AAA83600.2| 872|Caenorhabditis elegans Hypothetical
protein T19D2.1 protein.
Length = 872
Score = 217 bits (529), Expect = 3e-56
Identities = 123/300 (41%), Positives = 167/300 (55%), Gaps = 20/300 (6%)
Query: 122 VETAVFVDRDLYKHMTLNFPKDTERELVRFVLAMINAVQLLYHDPSLGRPVNFILKRLEI 181
VE AVF D ++ H + K E + F++A++N + +LY L +N + R EI
Sbjct: 135 VELAVFADDAMWDHFKKMYGKAAEENMHTFIMAVVNNIDVLYTQRLLQPRINIKIVRYEI 194
Query: 182 LHEDPANLK-RPH---DIDRFLSNFCTWQRLENPPGDNDPLHWDHALILTGLDLYVVNKN 237
L P + R H D+DR L FC +Q NPP D DP HWDHAL+ +G DL+ +N
Sbjct: 195 LKNIPHLMNARKHSNGDVDRLLDAFCQYQNEINPPNDADPRHWDHALLFSGYDLH---RN 251
Query: 238 GKDSSQVVGLAPVAGMCTVTSSCTVNEGRHFESVYVVAHEIGHNLGMRHDGPSADNGCDP 297
G + V G APV GMC+ SCT+NEG F SV+VV HE+GH+LGM HDG DN CD
Sbjct: 252 GVKT--VAGYAPVKGMCSGVRSCTINEGLDFGSVFVVTHEMGHSLGMYHDG---DNECDL 306
Query: 298 SAFLMSPTLGSGKITWSQCSKNYLQKFL-----DTVQSRCLLDHGNSAGQLDHSAEGILP 352
+MSP++GSGK WSQCS N + F+ D CL D + ++ E P
Sbjct: 307 RCCIMSPSVGSGKTHWSQCSVNEMATFVGHLGDDFRPPNCLQDASANEQRMVAFKESEPP 366
Query: 353 GERFDADQQCMLKYGRGSRHSA--AQNLEDICRDLHC-QRERYTWTSHPALEGTKCGDDM 409
G+ F D+QC + +G +H Q +++IC+ + C E T+HPALEGT CG M
Sbjct: 367 GQLFTLDEQCEIFHGECWKHELKDGQTMQNICQMVWCGNGEGVIRTAHPALEGTYCGFGM 426
Score = 32.3 bits (70), Expect = 1.3
Identities = 29/92 (31%), Positives = 38/92 (41%), Gaps = 17/92 (18%)
Query: 577 HRGCTRRKSPYQYATMVCSKYKER----VRRLSGLGMQISPALEDPDRPCRIACQDERVA 632
HR S YAT VCS+ ++ LSG GMQ A+ C+I C
Sbjct: 503 HRDVCNGDSIENYATRVCSRLRDENAIPNTILSGEGMQFEQAM------CKIWCLISGST 556
Query: 633 HRFYLVNGHEGWFPLGTACGHNNASYCVSGKC 664
+ + N FP G CG YC+ G+C
Sbjct: 557 NIRTVSN-----FPDGAPCG--PGQYCIKGEC 581
>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 186 bits (454), Expect = 4e-47
Identities = 109/299 (36%), Positives = 159/299 (53%), Gaps = 20/299 (6%)
Query: 120 IFVETAVFVDRDLYKHMTLNFPKDTERELVRFVLAMINAVQLLYHDPSLGRPVNFILKRL 179
I +E +F+D L++H + +D E+ L+ F LA+IN V +LY +L ++ ++ R
Sbjct: 233 ITLEIGLFLDSKLFEHFEREYIQDAEQHLLEFSLALINNVHVLYQQDTLTPNLDIVIVRY 292
Query: 180 EILHEDPANLK----RPHDIDRFLSNFCTWQRLENPPGD-NDPLHWDHALILTGLDLYVV 234
E+ P+ L + L FC +Q NP D D H+DH ++LTG D+Y
Sbjct: 293 EMWRTQPSALSTGVHKNGQAQSLLDAFCRYQAHMNPGTDLTDMNHYDHGVLLTGYDIY-- 350
Query: 235 NKNGKDSSQVVGLAPVAGMCTVTSSCTVNEGRHFESVYVVAHEIGHNLGMRHDGPSADNG 294
++ V G+APVA MC +C++ EG H +V+AHE+GHN+GM HDG N
Sbjct: 351 ----HTTTSVAGVAPVARMCDPLFACSLVEGLHLGRSFVLAHEMGHNMGMVHDG--VQNQ 404
Query: 295 CDPSAFLMSPTLGSGKITWSQCSKNYLQKFL----DTVQSRCLLDHGNSAGQLDHSAEGI 350
C+ LMS G+GK TWS CS FL ++ + CL D +H ++
Sbjct: 405 CNKGCCLMSAVNGAGKTTWSDCSVREFNAFLLQLDESGRGNCLRDASPGLISTNHLSDLR 464
Query: 351 LPGERFDADQQCMLKYGRGSRHSA--AQNLEDICRDLHCQRERYT-WTSHPALEGTKCG 406
LPG+RF ADQQC +GR + + ++DICR L C T T+HPALEG+ CG
Sbjct: 465 LPGQRFTADQQCSYFWGRDYKVEIPNGKAMDDICRILWCGNSGSTISTAHPALEGSWCG 523
Score = 37.1 bits (82), Expect = 0.046
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 616 EDPDRPCRIACQDERVAHRFYLVNGHEGWFPLGTACGHNNASYCVSGKCLEFGGDNTPVP 675
E +PCR+ C + L+ ++G FP GT CG + +YCV G+CL DN +
Sbjct: 641 EHSTQPCRVWCH--LIGSE--LIR-NKGQFPDGTPCGFD--AYCVGGQCLALSCDNKALV 693
Query: 676 ETVYALPLLPRR 687
E P + R
Sbjct: 694 EQPEDCPRIEGR 705
>Z50004-3|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 186 bits (454), Expect = 4e-47
Identities = 109/299 (36%), Positives = 159/299 (53%), Gaps = 20/299 (6%)
Query: 120 IFVETAVFVDRDLYKHMTLNFPKDTERELVRFVLAMINAVQLLYHDPSLGRPVNFILKRL 179
I +E +F+D L++H + +D E+ L+ F LA+IN V +LY +L ++ ++ R
Sbjct: 233 ITLEIGLFLDSKLFEHFEREYIQDAEQHLLEFSLALINNVHVLYQQDTLTPNLDIVIVRY 292
Query: 180 EILHEDPANLK----RPHDIDRFLSNFCTWQRLENPPGD-NDPLHWDHALILTGLDLYVV 234
E+ P+ L + L FC +Q NP D D H+DH ++LTG D+Y
Sbjct: 293 EMWRTQPSALSTGVHKNGQAQSLLDAFCRYQAHMNPGTDLTDMNHYDHGVLLTGYDIY-- 350
Query: 235 NKNGKDSSQVVGLAPVAGMCTVTSSCTVNEGRHFESVYVVAHEIGHNLGMRHDGPSADNG 294
++ V G+APVA MC +C++ EG H +V+AHE+GHN+GM HDG N
Sbjct: 351 ----HTTTSVAGVAPVARMCDPLFACSLVEGLHLGRSFVLAHEMGHNMGMVHDG--VQNQ 404
Query: 295 CDPSAFLMSPTLGSGKITWSQCSKNYLQKFL----DTVQSRCLLDHGNSAGQLDHSAEGI 350
C+ LMS G+GK TWS CS FL ++ + CL D +H ++
Sbjct: 405 CNKGCCLMSAVNGAGKTTWSDCSVREFNAFLLQLDESGRGNCLRDASPGLISTNHLSDLR 464
Query: 351 LPGERFDADQQCMLKYGRGSRHSA--AQNLEDICRDLHCQRERYT-WTSHPALEGTKCG 406
LPG+RF ADQQC +GR + + ++DICR L C T T+HPALEG+ CG
Sbjct: 465 LPGQRFTADQQCSYFWGRDYKVEIPNGKAMDDICRILWCGNSGSTISTAHPALEGSWCG 523
Score = 37.1 bits (82), Expect = 0.046
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 616 EDPDRPCRIACQDERVAHRFYLVNGHEGWFPLGTACGHNNASYCVSGKCLEFGGDNTPVP 675
E +PCR+ C + L+ ++G FP GT CG + +YCV G+CL DN +
Sbjct: 641 EHSTQPCRVWCH--LIGSE--LIR-NKGQFPDGTPCGFD--AYCVGGQCLALSCDNKALV 693
Query: 676 ETVYALPLLPRR 687
E P + R
Sbjct: 694 EQPEDCPRIEGR 705
>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
Length = 1461
Score = 186 bits (454), Expect = 4e-47
Identities = 109/299 (36%), Positives = 159/299 (53%), Gaps = 20/299 (6%)
Query: 120 IFVETAVFVDRDLYKHMTLNFPKDTERELVRFVLAMINAVQLLYHDPSLGRPVNFILKRL 179
I +E +F+D L++H + +D E+ L+ F LA+IN V +LY +L ++ ++ R
Sbjct: 233 ITLEIGLFLDSKLFEHFEREYIQDAEQHLLEFSLALINNVHVLYQQDTLTPNLDIVIVRY 292
Query: 180 EILHEDPANLK----RPHDIDRFLSNFCTWQRLENPPGD-NDPLHWDHALILTGLDLYVV 234
E+ P+ L + L FC +Q NP D D H+DH ++LTG D+Y
Sbjct: 293 EMWRTQPSALSTGVHKNGQAQSLLDAFCRYQAHMNPGTDLTDMNHYDHGVLLTGYDIY-- 350
Query: 235 NKNGKDSSQVVGLAPVAGMCTVTSSCTVNEGRHFESVYVVAHEIGHNLGMRHDGPSADNG 294
++ V G+APVA MC +C++ EG H +V+AHE+GHN+GM HDG N
Sbjct: 351 ----HTTTSVAGVAPVARMCDPLFACSLVEGLHLGRSFVLAHEMGHNMGMVHDG--VQNQ 404
Query: 295 CDPSAFLMSPTLGSGKITWSQCSKNYLQKFL----DTVQSRCLLDHGNSAGQLDHSAEGI 350
C+ LMS G+GK TWS CS FL ++ + CL D +H ++
Sbjct: 405 CNKGCCLMSAVNGAGKTTWSDCSVREFNAFLLQLDESGRGNCLRDASPGLISTNHLSDLR 464
Query: 351 LPGERFDADQQCMLKYGRGSRHSA--AQNLEDICRDLHCQRERYT-WTSHPALEGTKCG 406
LPG+RF ADQQC +GR + + ++DICR L C T T+HPALEG+ CG
Sbjct: 465 LPGQRFTADQQCSYFWGRDYKVEIPNGKAMDDICRILWCGNSGSTISTAHPALEGSWCG 523
Score = 37.1 bits (82), Expect = 0.046
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 616 EDPDRPCRIACQDERVAHRFYLVNGHEGWFPLGTACGHNNASYCVSGKCLEFGGDNTPVP 675
E +PCR+ C + L+ ++G FP GT CG + +YCV G+CL DN +
Sbjct: 641 EHSTQPCRVWCH--LIGSE--LIR-NKGQFPDGTPCGFD--AYCVGGQCLALSCDNKALV 693
Query: 676 ETVYALPLLPRR 687
E P + R
Sbjct: 694 EQPEDCPRIEGR 705
>U29378-9|AAP40541.1| 975|Caenorhabditis elegans Adamts family
protein 2, isoform c protein.
Length = 975
Score = 173 bits (420), Expect = 5e-43
Identities = 103/300 (34%), Positives = 161/300 (53%), Gaps = 26/300 (8%)
Query: 117 QPAIFVETAVFVDRDLYKHMTLNFPKDTERELVRFVLAMINAVQLLYHDPSLGRPVNFIL 176
Q + VE AVFVD +L++H + +R+L + L ++N +Q++Y+ P+ P+ F +
Sbjct: 208 QSDLIVELAVFVDENLWRHFSSKHGGMADRKLQDYTLTLLNNIQIMYYQPTASPPLTFRV 267
Query: 177 KRLEILHEDPANLK---RPH-DIDRFLSNFCTWQRLENPPGDNDPLHWDHALILTGLDLY 232
R E+L P+ L H + +L FC +QR + WDHA++LTG D++
Sbjct: 268 IRYEVLTRQPSALAGYLHNHGNAQMYLDRFCRYQR------NLAVRDWDHAIMLTGYDIH 321
Query: 233 VVNKNGKDSSQVVGLAPVAGMCTVTSSCTVNEGRHFESVYVVAHEIGHNLGMRHDGPSAD 292
G S + G+A + GMC ++CT+ EG F S ++ HE+GH++GMRHD P
Sbjct: 322 ----RGAGSRSISGIARLDGMCDPWNTCTLAEGLDFTSAFIGTHELGHSVGMRHDEPYCQ 377
Query: 293 NGCDPSAFLMSPTLGSGKITWSQCSKNYLQKFLDTVQSR--CLLDHGNSAGQLDHSAEGI 350
S +MS +LG GK+TWS CS +FL + R L N +L+ S+ +
Sbjct: 378 -----SKHIMSSSLGPGKVTWSTCSLRDYHQFLQRLDGRGKNCLRVSNMPNKLEISS-NV 431
Query: 351 LPGERFDADQQCMLKYGRGSRHSAAQ--NLEDICRDLHCQRERY--TWTSHPALEGTKCG 406
PG+ +DA+ QC L +G G + + + + IC + C + + TSHPALEGT CG
Sbjct: 432 KPGQIYDANLQCELMHGNGYQQVTPRQDSYDGICYMMWCGQSSFGRIITSHPALEGTFCG 491
>U29378-8|AAA68721.4| 1020|Caenorhabditis elegans Adamts family
protein 2, isoform a protein.
Length = 1020
Score = 173 bits (420), Expect = 5e-43
Identities = 103/300 (34%), Positives = 161/300 (53%), Gaps = 26/300 (8%)
Query: 117 QPAIFVETAVFVDRDLYKHMTLNFPKDTERELVRFVLAMINAVQLLYHDPSLGRPVNFIL 176
Q + VE AVFVD +L++H + +R+L + L ++N +Q++Y+ P+ P+ F +
Sbjct: 208 QSDLIVELAVFVDENLWRHFSSKHGGMADRKLQDYTLTLLNNIQIMYYQPTASPPLTFRV 267
Query: 177 KRLEILHEDPANLK---RPH-DIDRFLSNFCTWQRLENPPGDNDPLHWDHALILTGLDLY 232
R E+L P+ L H + +L FC +QR + WDHA++LTG D++
Sbjct: 268 IRYEVLTRQPSALAGYLHNHGNAQMYLDRFCRYQR------NLAVRDWDHAIMLTGYDIH 321
Query: 233 VVNKNGKDSSQVVGLAPVAGMCTVTSSCTVNEGRHFESVYVVAHEIGHNLGMRHDGPSAD 292
G S + G+A + GMC ++CT+ EG F S ++ HE+GH++GMRHD P
Sbjct: 322 ----RGAGSRSISGIARLDGMCDPWNTCTLAEGLDFTSAFIGTHELGHSVGMRHDEPYCQ 377
Query: 293 NGCDPSAFLMSPTLGSGKITWSQCSKNYLQKFLDTVQSR--CLLDHGNSAGQLDHSAEGI 350
S +MS +LG GK+TWS CS +FL + R L N +L+ S+ +
Sbjct: 378 -----SKHIMSSSLGPGKVTWSTCSLRDYHQFLQRLDGRGKNCLRVSNMPNKLEISS-NV 431
Query: 351 LPGERFDADQQCMLKYGRGSRHSAAQ--NLEDICRDLHCQRERY--TWTSHPALEGTKCG 406
PG+ +DA+ QC L +G G + + + + IC + C + + TSHPALEGT CG
Sbjct: 432 KPGQIYDANLQCELMHGNGYQQVTPRQDSYDGICYMMWCGQSSFGRIITSHPALEGTFCG 491
>AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like
protease protein.
Length = 1020
Score = 173 bits (420), Expect = 5e-43
Identities = 103/300 (34%), Positives = 161/300 (53%), Gaps = 26/300 (8%)
Query: 117 QPAIFVETAVFVDRDLYKHMTLNFPKDTERELVRFVLAMINAVQLLYHDPSLGRPVNFIL 176
Q + VE AVFVD +L++H + +R+L + L ++N +Q++Y+ P+ P+ F +
Sbjct: 208 QSDLIVELAVFVDENLWRHFSSKHGGMADRKLQDYTLTLLNNIQIMYYQPTASPPLTFRV 267
Query: 177 KRLEILHEDPANLK---RPH-DIDRFLSNFCTWQRLENPPGDNDPLHWDHALILTGLDLY 232
R E+L P+ L H + +L FC +QR + WDHA++LTG D++
Sbjct: 268 IRYEVLTRQPSALAGYLHNHGNAQMYLDRFCRYQR------NLAVRDWDHAIMLTGYDIH 321
Query: 233 VVNKNGKDSSQVVGLAPVAGMCTVTSSCTVNEGRHFESVYVVAHEIGHNLGMRHDGPSAD 292
G S + G+A + GMC ++CT+ EG F S ++ HE+GH++GMRHD P
Sbjct: 322 ----RGAGSRSISGIARLDGMCDPWNTCTLAEGLDFTSAFIGTHELGHSVGMRHDEPYCQ 377
Query: 293 NGCDPSAFLMSPTLGSGKITWSQCSKNYLQKFLDTVQSR--CLLDHGNSAGQLDHSAEGI 350
S +MS +LG GK+TWS CS +FL + R L N +L+ S+ +
Sbjct: 378 -----SKHIMSSSLGPGKVTWSTCSLRDYHQFLQRLDGRGKNCLRVSNMPNKLEISS-NV 431
Query: 351 LPGERFDADQQCMLKYGRGSRHSAAQ--NLEDICRDLHCQRERY--TWTSHPALEGTKCG 406
PG+ +DA+ QC L +G G + + + + IC + C + + TSHPALEGT CG
Sbjct: 432 KPGQIYDANLQCELMHGNGYQQVTPRQDSYDGICYMMWCGQSSFGRIITSHPALEGTFCG 491
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 103 bits (246), Expect = 6e-22
Identities = 89/334 (26%), Positives = 143/334 (42%), Gaps = 44/334 (13%)
Query: 103 EKLATQSIREKRAIQP-AIFVETAVFVDRDLYKHMTLNFPKDTERELVRFVLAMINAVQL 161
E + + R +RA +VE V D +Y++ R L +VL + + V
Sbjct: 262 EDVIERKARSRRAANSWDHYVEVLVVADTKMYEYHG--------RSLEDYVLTLFSTVAS 313
Query: 162 LYHDPSLGRPVNFILKRLEILHEDPANLKRPHDIDRFLSNFCTWQRLENPPGDNDPLHWD 221
+Y SL +N ++ +L +L + A + + + L +FC WQ+ N P D+ H D
Sbjct: 314 IYRHQSLRASINVVVVKLIVLKTENAGPRITQNAQQTLQDFCRWQQYYNDPDDSSVQHHD 373
Query: 222 HALILTGLDLYVVNKNGKDSSQVVGLAPVAGMCTVTSSCTVNEGRHFESVYVVAHEIGHN 281
A++LT D + GK +GLA + MC + SC + E + + +AHE+GH
Sbjct: 374 VAILLTRKD--ICRSQGK--CDTLGLAELGTMCDMQKSCAIIEDNGLSAAFTIAHELGHV 429
Query: 282 LGMRHDGP-------SADNGC-------DPSAF-----LMSPTL--GSGKITWSQCSKNY 320
+ HD + C D + F +M+PTL + +WS CS
Sbjct: 430 FSIPHDDERKCSTYMPVNKVCKFQSTKFDKTQFQNNFHIMAPTLEYNTHPWSWSPCSAGM 489
Query: 321 LQKFLDT--VQSRCLLDHGNSAGQLDHSAEGILPGERFDADQQCMLKYGRGSRHSAAQNL 378
L++FL+ Q++CL D + PG+++DA QQC +G S
Sbjct: 490 LERFLENNRGQTQCLFDQPVERRYYEDVFVRDEPGKKYDAHQQCKFVFGPASELCPYM-- 547
Query: 379 EDICRDLHCQ----RERYTWTSH-PALEGTKCGD 407
CR L C + T H P +GT C +
Sbjct: 548 -PTCRRLWCATFYGSQMGCRTQHMPWADGTPCDE 580
Score = 34.7 bits (76), Expect = 0.24
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 22/158 (13%)
Query: 525 KSSGPWRRAAEWVAASGCHYHCIAPGAGLRL-VRAAASP--RTSIQLCAPAAAQPHRGCT 581
K G W +W + C C G G++ +R SP R + C + +R C
Sbjct: 601 KIDGQW---GDWRSWGECSRTC---GGGVQKGLRDCDSPKPRNGGKYCV-GQRERYRSCN 653
Query: 582 RRKSPYQ---YATMVCSKYKERVRRLSGLGMQIS---PALED--PDRPCRIACQDERVAH 633
++ P+ Y + CS++ + + G+ + P + P+ C++ C+ A
Sbjct: 654 TQECPWDTQPYREVQCSEFNNKDIGIQGVASTNTHWVPKYANVAPNERCKLYCRLSGSA- 712
Query: 634 RFYLVNGHEGWFPLGTACGHNNASYCVSGKCLEFGGDN 671
FYL+ GT C N CV+G C+ G D+
Sbjct: 713 AFYLLRDK---VVDGTPCDRNGDDICVAGACMPAGCDH 747
>Z69360-9|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 103 bits (246), Expect = 6e-22
Identities = 89/334 (26%), Positives = 143/334 (42%), Gaps = 44/334 (13%)
Query: 103 EKLATQSIREKRAIQP-AIFVETAVFVDRDLYKHMTLNFPKDTERELVRFVLAMINAVQL 161
E + + R +RA +VE V D +Y++ R L +VL + + V
Sbjct: 262 EDVIERKARSRRAANSWDHYVEVLVVADTKMYEYHG--------RSLEDYVLTLFSTVAS 313
Query: 162 LYHDPSLGRPVNFILKRLEILHEDPANLKRPHDIDRFLSNFCTWQRLENPPGDNDPLHWD 221
+Y SL +N ++ +L +L + A + + + L +FC WQ+ N P D+ H D
Sbjct: 314 IYRHQSLRASINVVVVKLIVLKTENAGPRITQNAQQTLQDFCRWQQYYNDPDDSSVQHHD 373
Query: 222 HALILTGLDLYVVNKNGKDSSQVVGLAPVAGMCTVTSSCTVNEGRHFESVYVVAHEIGHN 281
A++LT D + GK +GLA + MC + SC + E + + +AHE+GH
Sbjct: 374 VAILLTRKD--ICRSQGK--CDTLGLAELGTMCDMQKSCAIIEDNGLSAAFTIAHELGHV 429
Query: 282 LGMRHDGP-------SADNGC-------DPSAF-----LMSPTL--GSGKITWSQCSKNY 320
+ HD + C D + F +M+PTL + +WS CS
Sbjct: 430 FSIPHDDERKCSTYMPVNKVCKFQSTKFDKTQFQNNFHIMAPTLEYNTHPWSWSPCSAGM 489
Query: 321 LQKFLDT--VQSRCLLDHGNSAGQLDHSAEGILPGERFDADQQCMLKYGRGSRHSAAQNL 378
L++FL+ Q++CL D + PG+++DA QQC +G S
Sbjct: 490 LERFLENNRGQTQCLFDQPVERRYYEDVFVRDEPGKKYDAHQQCKFVFGPASELCPYM-- 547
Query: 379 EDICRDLHCQ----RERYTWTSH-PALEGTKCGD 407
CR L C + T H P +GT C +
Sbjct: 548 -PTCRRLWCATFYGSQMGCRTQHMPWADGTPCDE 580
Score = 34.7 bits (76), Expect = 0.24
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 22/158 (13%)
Query: 525 KSSGPWRRAAEWVAASGCHYHCIAPGAGLRL-VRAAASP--RTSIQLCAPAAAQPHRGCT 581
K G W +W + C C G G++ +R SP R + C + +R C
Sbjct: 601 KIDGQW---GDWRSWGECSRTC---GGGVQKGLRDCDSPKPRNGGKYCV-GQRERYRSCN 653
Query: 582 RRKSPYQ---YATMVCSKYKERVRRLSGLGMQIS---PALED--PDRPCRIACQDERVAH 633
++ P+ Y + CS++ + + G+ + P + P+ C++ C+ A
Sbjct: 654 TQECPWDTQPYREVQCSEFNNKDIGIQGVASTNTHWVPKYANVAPNERCKLYCRLSGSA- 712
Query: 634 RFYLVNGHEGWFPLGTACGHNNASYCVSGKCLEFGGDN 671
FYL+ GT C N CV+G C+ G D+
Sbjct: 713 AFYLLRDK---VVDGTPCDRNGDDICVAGACMPAGCDH 747
>Z74037-5|CAA98493.3| 509|Caenorhabditis elegans Hypothetical
protein F57B7.4 protein.
Length = 509
Score = 64.9 bits (151), Expect = 2e-10
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 27/214 (12%)
Query: 217 PLHWDHALILTGLDLYVVNKNGKDSSQVVGLAPVAGMCTVTSSCTVNE--GRHFESVYVV 274
P H +HA+++T DL +N N S G+A V +C S +V E G S+ ++
Sbjct: 247 PRH-EHAVLITKFDLISINGN----SATQGMAYVGNICENGDSSSVVEDIGAGLTSL-IM 300
Query: 275 AHEIGHNLGMRHDGPSADNGCDPS-AFLMSPTL-GS-------GKITWSQCSKNYLQKFL 325
AHEIGH+LG HDG CD + +LM+ + GS S CS N + + L
Sbjct: 301 AHEIGHSLGALHDGAYETAECDSNDNYLMAVAVSGSADRQSFLNSRRMSNCSINSIIENL 360
Query: 326 DTVQSRCLLDHGNSAGQLDHSAEGIL--PGERFDADQQCMLKYGR---GSRHSAAQNLED 380
+ C+ G+ D S + + PGE +QC + +G H + +
Sbjct: 361 KEPTANCVKKWKTKKGK-DVSQKDFIKKPGELVKITRQCQVAFGPTFIPCLHIGYFHEQS 419
Query: 381 ICRDLHC----QRERYTWTSHPALEGTKCGDDMY 410
IC + C E T PA +GT+CG +M+
Sbjct: 420 ICERIWCSDGESDECQTLNYFPAFDGTECGYNMW 453
>AB044562-1|BAA96734.1| 509|Caenorhabditis elegans MIG-17 protein.
Length = 509
Score = 64.9 bits (151), Expect = 2e-10
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 27/214 (12%)
Query: 217 PLHWDHALILTGLDLYVVNKNGKDSSQVVGLAPVAGMCTVTSSCTVNE--GRHFESVYVV 274
P H +HA+++T DL +N N S G+A V +C S +V E G S+ ++
Sbjct: 247 PRH-EHAVLITKFDLISINGN----SATQGMAYVGNICENGDSSSVVEDIGAGLTSL-IM 300
Query: 275 AHEIGHNLGMRHDGPSADNGCDPS-AFLMSPTL-GS-------GKITWSQCSKNYLQKFL 325
AHEIGH+LG HDG CD + +LM+ + GS S CS N + + L
Sbjct: 301 AHEIGHSLGALHDGAYETAECDSNDNYLMAVAVSGSADRQSFLNSRRMSNCSINSIIENL 360
Query: 326 DTVQSRCLLDHGNSAGQLDHSAEGIL--PGERFDADQQCMLKYGR---GSRHSAAQNLED 380
+ C+ G+ D S + + PGE +QC + +G H + +
Sbjct: 361 KEPTANCVKKWKTKKGK-DVSQKDFIKKPGELVKITRQCQVAFGPTFIPCLHIGYFHEQS 419
Query: 381 ICRDLHC----QRERYTWTSHPALEGTKCGDDMY 410
IC + C E T PA +GT+CG +M+
Sbjct: 420 ICERIWCSDGESDECQTLNYFPAFDGTECGYNMW 453
>Z81460-5|CAB03832.1| 952|Caenorhabditis elegans Hypothetical
protein C04A11.4 protein.
Length = 952
Score = 44.4 bits (100), Expect = 3e-04
Identities = 36/119 (30%), Positives = 49/119 (41%), Gaps = 6/119 (5%)
Query: 244 VVGLAPVAGMCTVTSSCTV---NEGRHFESVYVVAHEIGHNLGMRHDGPSAD-NGCDPSA 299
VVG A MC+ S + + E+V AHE+GH GM HD D C
Sbjct: 277 VVGKAYKGTMCSYDYSGGIYVDHNNDTVETVATFAHELGHTFGMDHDPNDKDVCYCPMPR 336
Query: 300 FLMSPTLGSGKITWSQCSKNYLQKFLDTVQSRCLLDHGNSAGQLDHSAEGIL-PGERFD 357
+M+P G ++ WS+CS L + CL + GI+ PGE D
Sbjct: 337 CIMNPQSGHMEV-WSECSVKNLASGFNRGIDLCLFNEPGKKPSDAKCGNGIVEPGEECD 394
>Z70209-3|CAA94147.1| 952|Caenorhabditis elegans Hypothetical
protein C04A11.4 protein.
Length = 952
Score = 44.4 bits (100), Expect = 3e-04
Identities = 36/119 (30%), Positives = 49/119 (41%), Gaps = 6/119 (5%)
Query: 244 VVGLAPVAGMCTVTSSCTV---NEGRHFESVYVVAHEIGHNLGMRHDGPSAD-NGCDPSA 299
VVG A MC+ S + + E+V AHE+GH GM HD D C
Sbjct: 277 VVGKAYKGTMCSYDYSGGIYVDHNNDTVETVATFAHELGHTFGMDHDPNDKDVCYCPMPR 336
Query: 300 FLMSPTLGSGKITWSQCSKNYLQKFLDTVQSRCLLDHGNSAGQLDHSAEGIL-PGERFD 357
+M+P G ++ WS+CS L + CL + GI+ PGE D
Sbjct: 337 CIMNPQSGHMEV-WSECSVKNLASGFNRGIDLCLFNEPGKKPSDAKCGNGIVEPGEECD 394
>U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1
preproprotein protein.
Length = 1042
Score = 37.9 bits (84), Expect = 0.026
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 14/136 (10%)
Query: 230 DLYVVNKNGKDSSQVVGLAPVAGMCTVTSSCTVNEGRHFESVY---VVAHEIGHNLGMRH 286
D ++ G ++Q V A + +CT S+ V F + + ++A IGH LG+ H
Sbjct: 314 DASILFTAGSFANQEVSNAAIRSICTARSAVIVKGVEQFATHWNGELLAQSIGHLLGLEH 373
Query: 287 DGPSADNGCDPS---AFLMSP-TLGSG---KITW--SQCSKNYLQKFLDTVQSRCLLDHG 337
D + C+PS P +G G +W S+CS + +CLL+
Sbjct: 374 DTTAC--SCEPSPECVMRQQPGRVGGGGGSPFSWQFSKCSVARMHGIWQDGNIQCLLNKP 431
Query: 338 NSAGQLDHSAEGILPG 353
+L G++ G
Sbjct: 432 FQVSELRECGNGVVDG 447
>AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical
protein Y37D8A.13 protein.
Length = 1042
Score = 37.9 bits (84), Expect = 0.026
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 14/136 (10%)
Query: 230 DLYVVNKNGKDSSQVVGLAPVAGMCTVTSSCTVNEGRHFESVY---VVAHEIGHNLGMRH 286
D ++ G ++Q V A + +CT S+ V F + + ++A IGH LG+ H
Sbjct: 314 DASILFTAGSFANQEVSNAAIRSICTARSAVIVKGVEQFATHWNGELLAQSIGHLLGLEH 373
Query: 287 DGPSADNGCDPS---AFLMSP-TLGSG---KITW--SQCSKNYLQKFLDTVQSRCLLDHG 337
D + C+PS P +G G +W S+CS + +CLL+
Sbjct: 374 DTTAC--SCEPSPECVMRQQPGRVGGGGGSPFSWQFSKCSVARMHGIWQDGNIQCLLNKP 431
Query: 338 NSAGQLDHSAEGILPG 353
+L G++ G
Sbjct: 432 FQVSELRECGNGVVDG 447
>Z96047-6|CAB09416.1| 922|Caenorhabditis elegans Hypothetical
protein DY3.7 protein.
Length = 922
Score = 32.7 bits (71), Expect = 0.98
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 270 SVYVVAHEIGHNLGMRHDGPS-ADNGCDPSAFLMSPTLGSG 309
S +AHEIGHN G HD P+ G F+M + SG
Sbjct: 420 SQLTLAHEIGHNFGSPHDFPAECQPGLPDGNFIMFASATSG 460
>AF024614-1|AAB97161.1| 922|Caenorhabditis elegans ADAM 10 protein.
Length = 922
Score = 32.7 bits (71), Expect = 0.98
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 270 SVYVVAHEIGHNLGMRHDGPS-ADNGCDPSAFLMSPTLGSG 309
S +AHEIGHN G HD P+ G F+M + SG
Sbjct: 420 SQLTLAHEIGHNFGSPHDFPAECQPGLPDGNFIMFASATSG 460
>Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical
protein R13G10.1 protein.
Length = 1469
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 69 RKRDIITENKPDNTRLKEFKLNLAHRNRTIGKFIEKLATQSIREKRA 115
RKR++I K TR+ E K ++A R + + E + + + EKRA
Sbjct: 828 RKRELIMSTKEQKTRIAELKSSIAAHERRMVNYRE-VTVEDLDEKRA 873
>L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome
condensation protein protein.
Length = 1469
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 69 RKRDIITENKPDNTRLKEFKLNLAHRNRTIGKFIEKLATQSIREKRA 115
RKR++I K TR+ E K ++A R + + E + + + EKRA
Sbjct: 828 RKRELIMSTKEQKTRIAELKSSIAAHERRMVNYRE-VTVEDLDEKRA 873
>U27312-14|AAA68257.2| 276|Caenorhabditis elegans Hypothetical
protein F26A1.1 protein.
Length = 276
Score = 30.7 bits (66), Expect = 4.0
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 77 NKPDNTRLKEFKLNLAHRNRTIGKFIEKLATQSIREKRAIQPAIFVETAVFVDRDLYKH 135
N NTR+ EFKLNL+ N I + ++ + + + + + + +D +KH
Sbjct: 155 NSNQNTRIPEFKLNLSFENPRIRQELDIIMNRPNSRRIIVCSVSIQKPKLVIDNKSFKH 213
>AC006749-2|AAF60533.3| 731|Caenorhabditis elegans Hypothetical
protein Y39D8B.3 protein.
Length = 731
Score = 30.3 bits (65), Expect = 5.2
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 68 RRKRDIITENKPDNTRLKEFKLNLAHRNRTIGKFIEKLATQSIREKRAIQ 117
+R +D+I E K ++TR+K N R KFI + + +A+Q
Sbjct: 232 KRWQDVIQEIKNESTRIKGKSQNKERMKRKFSKFIRTMKGTGLNPDKAMQ 281
>U88182-2|AAB42308.4| 961|Caenorhabditis elegans Patched related
family protein 5 protein.
Length = 961
Score = 29.9 bits (64), Expect = 6.9
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 156 INAVQLLYHDPSLGRPVNFILKRL--------EILHEDPANLKRPHDIDRFLSNFCTWQR 207
++AV++L D L RP N +L L IL P +L+ H +DR+ + +++
Sbjct: 553 LDAVKILPKDSPLQRP-NLVLTNLVWANYHPVTILINAPLDLENRHQMDRYWNMVDEFEK 611
Query: 208 LENPPGDNDPLHW 220
+ N G L W
Sbjct: 612 MHNCKGKASTLSW 624
>AF040648-3|AAL06034.2| 453|Caenorhabditis elegans Hypothetical
protein H19M22.3c protein.
Length = 453
Score = 29.5 bits (63), Expect = 9.2
Identities = 11/15 (73%), Positives = 13/15 (86%)
Query: 272 YVVAHEIGHNLGMRH 286
YV+AHEIGH LG+ H
Sbjct: 240 YVLAHEIGHALGLDH 254
>AF040648-1|AAK21412.1| 519|Caenorhabditis elegans Hypothetical
protein H19M22.3a protein.
Length = 519
Score = 29.5 bits (63), Expect = 9.2
Identities = 11/15 (73%), Positives = 13/15 (86%)
Query: 272 YVVAHEIGHNLGMRH 286
YV+AHEIGH LG+ H
Sbjct: 272 YVLAHEIGHALGLDH 286
>AB007816-1|BAA28352.1| 394|Caenorhabditis elegans matrix
metalloproteinase protein.
Length = 394
Score = 29.5 bits (63), Expect = 9.2
Identities = 11/15 (73%), Positives = 13/15 (86%)
Query: 272 YVVAHEIGHNLGMRH 286
YV+AHEIGH LG+ H
Sbjct: 181 YVLAHEIGHALGLDH 195
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.320 0.135 0.426
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,292,039
Number of Sequences: 27539
Number of extensions: 853917
Number of successful extensions: 2025
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1938
Number of HSP's gapped (non-prelim): 51
length of query: 754
length of database: 12,573,161
effective HSP length: 87
effective length of query: 667
effective length of database: 10,177,268
effective search space: 6788237756
effective search space used: 6788237756
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)
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