Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001969-TA|BGIBMGA001969-PA|IPR000884|Thrombospondin,
type I, IPR006025|Peptidase M, neutral zinc metallopeptidases,
zinc-binding site, IPR001590|Peptidase M12B, ADAM/reprolysin
(754 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g46200.2 68415.m05745 expressed protein low similarity to ES1... 33 0.92
At2g46200.1 68415.m05744 expressed protein low similarity to ES1... 33 0.92
At5g57010.1 68418.m07115 calmodulin-binding family protein conta... 31 2.1
At1g80000.2 68414.m09359 expressed protein identical to unknown ... 31 2.1
At1g80000.1 68414.m09358 expressed protein identical to unknown ... 31 2.1
At1g13880.1 68414.m01629 ELM2 domain-containing protein contains... 31 2.1
At3g12810.1 68416.m01598 SNF2 domain-containing protein / helica... 30 4.9
At5g26310.1 68418.m03145 UDP-glucoronosyl/UDP-glucosyl transfera... 30 6.5
At4g03510.2 68417.m00479 zinc finger (C3HC4-type RING finger) fa... 30 6.5
At4g03510.1 68417.m00478 zinc finger (C3HC4-type RING finger) fa... 30 6.5
>At2g46200.2 68415.m05745 expressed protein low similarity to ES18
[Mus musculus] GI:4416181
Length = 382
Score = 32.7 bits (71), Expect = 0.92
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 33 RRMVDTNNHLEENVSCVEKDKKNTTLVDQKLWTKHRRK-----------RDIITENKPDN 81
R +VD N+ EE + V K + KLW K +R+ R + + D
Sbjct: 114 RFVVDENSPWEEKSAAVRLTCKMKKSIRNKLWKKRKRRCAAEMRAKEPERFEQADREADE 173
Query: 82 TRLKEFKLNLAHRNRTIGKFIEKLATQSIREKRAIQPAIFVETAVFVD 129
R KE ++A+R K IEK+ + RE++ ++P + E A+ V+
Sbjct: 174 WREKEMAKDMANRKVDEMKAIEKIKAK--RERKRLEPEL--ELALIVE 217
>At2g46200.1 68415.m05744 expressed protein low similarity to ES18
[Mus musculus] GI:4416181
Length = 382
Score = 32.7 bits (71), Expect = 0.92
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 33 RRMVDTNNHLEENVSCVEKDKKNTTLVDQKLWTKHRRK-----------RDIITENKPDN 81
R +VD N+ EE + V K + KLW K +R+ R + + D
Sbjct: 114 RFVVDENSPWEEKSAAVRLTCKMKKSIRNKLWKKRKRRCAAEMRAKEPERFEQADREADE 173
Query: 82 TRLKEFKLNLAHRNRTIGKFIEKLATQSIREKRAIQPAIFVETAVFVD 129
R KE ++A+R K IEK+ + RE++ ++P + E A+ V+
Sbjct: 174 WREKEMAKDMANRKVDEMKAIEKIKAK--RERKRLEPEL--ELALIVE 217
>At5g57010.1 68418.m07115 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 495
Score = 31.5 bits (68), Expect = 2.1
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 266 RHFESVYVVAHEIGHNLGMRHDGPSADNGCDPSAFLMSPTLGSGK-ITWSQCSKNYLQK 323
RH+ H GHNL + +D S P F + +G GK + ++CS+ LQ+
Sbjct: 213 RHWLEAIDPRHRYGHNLHLYYDVWSESESTQPFFFWLD--IGDGKEVNLNKCSRTLLQR 269
>At1g80000.2 68414.m09359 expressed protein identical to unknown
protein GB:AAD55481 [Arabidopsis thaliana]
Length = 605
Score = 31.5 bits (68), Expect = 2.1
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 636 YLVNGHEGWFPLGTACGHNNASYCVSGKCLEFGGDNTPVPETVYALP 682
++ G + P G A GH N ++ ++FGG + VP ALP
Sbjct: 457 FMYGGTQFMGPAGMAAGHGNPNFPAFLPVMQFGGQHGGVPTFGMALP 503
>At1g80000.1 68414.m09358 expressed protein identical to unknown
protein GB:AAD55481 [Arabidopsis thaliana]
Length = 605
Score = 31.5 bits (68), Expect = 2.1
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 636 YLVNGHEGWFPLGTACGHNNASYCVSGKCLEFGGDNTPVPETVYALP 682
++ G + P G A GH N ++ ++FGG + VP ALP
Sbjct: 457 FMYGGTQFMGPAGMAAGHGNPNFPAFLPVMQFGGQHGGVPTFGMALP 503
>At1g13880.1 68414.m01629 ELM2 domain-containing protein contains
Pfam profile: PF01448 ELM2 domain
Length = 424
Score = 31.5 bits (68), Expect = 2.1
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 103 EKLATQSIREKRAIQPAIFVETAVFVDRDLYKHMTLNFPKDTERELVRF 151
E++A + ++ + I V +DRD +KH+ FP T +E+V +
Sbjct: 227 EEVAARLTEDEEDLFHEIVYSNPVSMDRDFWKHLKSAFPSRTMKEIVSY 275
>At3g12810.1 68416.m01598 SNF2 domain-containing protein / helicase
domain-containing protein similar to transcriptional
activator SRCAP [Homo sapiens] GI:5106572; contains Pfam
profiles PF00271: Helicase conserved C-terminal domain,
PF00176: SNF2 family N-terminal domain
Length = 2055
Score = 30.3 bits (65), Expect = 4.9
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 2 GVVKSNDSYYLIHPLPERFHTDDTKAHIIIKRRMVDTNNHLEENVSCVEKDKKNTTLVDQ 61
G V S+DS ++ PL R H K +I VDT+ + + +K KK+ D
Sbjct: 1549 GYVSSSDSD-MVTPL-SRMHMKGKKRDLI-----VDTDEE-KTSKKKAKKHKKSLPNSDI 1600
Query: 62 KLWTKHRRKRDIITENKPDNTRLKEFKLNLAHRNRTIG-KFIEKLATQSI 110
K + + D + +KP ++ + + +L L +R +T+G KFI + + +
Sbjct: 1601 K-YKQTSALLDELEPSKPSDSMVVDNELKLTNRGKTVGKKFITSMPIKRV 1649
>At5g26310.1 68418.m03145 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 481
Score = 29.9 bits (64), Expect = 6.5
Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 364 LKYGRGSRHSAAQNLEDICRDLHCQRERYTWTSHPALEGTKCGD 407
+ +G G +A Q L ++ L ++R+ W P ++G+ C D
Sbjct: 268 ISFGSGGSLTA-QQLTELAWGLEESQQRFIWVVRPPVDGSSCSD 310
>At4g03510.2 68417.m00479 zinc finger (C3HC4-type RING finger)
family protein (RMA1) identical to RING zinc finger
protein RMA1 gi:3164222
Length = 249
Score = 29.9 bits (64), Expect = 6.5
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Query: 575 QPHRGCTRRKSPYQYATMV-------CSKYKERVRRLSGLGMQISPALEDPDRPCRIACQ 627
Q HR C KS ++T+V C+ +E + + LE P+ P A
Sbjct: 88 QRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNSVPKRPVGPVYRLEMPNSP--YAST 145
Query: 628 DERVAHRFYLVNGHEGWFPLGTACGHNNASY 658
D R++ R + + EG++P+ N+ SY
Sbjct: 146 DLRLSQRVHFNSPQEGYYPVSGVMSSNSLSY 176
>At4g03510.1 68417.m00478 zinc finger (C3HC4-type RING finger)
family protein (RMA1) identical to RING zinc finger
protein RMA1 gi:3164222
Length = 249
Score = 29.9 bits (64), Expect = 6.5
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Query: 575 QPHRGCTRRKSPYQYATMV-------CSKYKERVRRLSGLGMQISPALEDPDRPCRIACQ 627
Q HR C KS ++T+V C+ +E + + LE P+ P A
Sbjct: 88 QRHRQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNSVPKRPVGPVYRLEMPNSP--YAST 145
Query: 628 DERVAHRFYLVNGHEGWFPLGTACGHNNASY 658
D R++ R + + EG++P+ N+ SY
Sbjct: 146 DLRLSQRVHFNSPQEGYYPVSGVMSSNSLSY 176
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.135 0.426
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,323,097
Number of Sequences: 28952
Number of extensions: 800863
Number of successful extensions: 1604
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1601
Number of HSP's gapped (non-prelim): 10
length of query: 754
length of database: 12,070,560
effective HSP length: 87
effective length of query: 667
effective length of database: 9,551,736
effective search space: 6371007912
effective search space used: 6371007912
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)
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