GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001966-TA|BGIBMGA001966-PA|IPR002086|Aldehyde
dehydrogenase, IPR012394|Aldehyde dehydrogenase NAD(P)-dependent,
IPR005225|Small GTP-binding protein domain,
IPR009078|Ferritin/ribonucleotide reductase-like, IPR003577|Ras small
GTPase, Ras type, IPR003579|Ras small GTPase, Rab type, IPR003578|Ras
small GTPase, Rho type, IPR002041|GTP-binding nuclear protein Ran,
IPR001806|Ras GTPase, IPR013753|Ras
         (750 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...   215   4e-57
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...   151   5e-38
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            80   2e-16
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            31   0.11 
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    28   0.78 

>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score =  215 bits (525), Expect = 4e-57
 Identities = 97/168 (57%), Positives = 121/168 (72%)

Query: 565 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 624
           K V+VGDG  GKTC+LI ++ D FP  YVPT F+NY A + VDG QV L LWDTAGQEDY
Sbjct: 8   KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMVVDGVQVSLGLWDTAGQEDY 67

Query: 625 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPA 684
           DRLRPLSYP TDV L+C+SV SP S EN+  KW PE+KH CP+ PIILVG K DLR D  
Sbjct: 68  DRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKIDLREDRE 127

Query: 685 TINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETA 732
           TI+ L       +K ++G+ +A KI A  Y+ECSA ++ G+++VF+ A
Sbjct: 128 TISLLADQGLSALKREQGQKLANKIRAVKYMECSALTQRGLKQVFDEA 175


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score =  151 bits (367), Expect = 5e-38
 Identities = 67/134 (50%), Positives = 96/134 (71%), Gaps = 1/134 (0%)

Query: 618 TAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKK 677
           +AGQEDYDRLRPLSYP TDV L+CFSV SP S EN+ EKW PE+ H C   P +LVG + 
Sbjct: 1   SAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQI 60

Query: 678 DLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAAL 737
           DLR++ +T+ +L K KQ+P+  ++G  +A+++ A  Y+ECSA +++G++ VF+ A  AAL
Sbjct: 61  DLRDENSTLEKLAKNKQKPITLEQGEKLAKELKAVKYVECSALTQKGLKNVFDVAILAAL 120

Query: 738 Q-VKKKKKTRCSLL 750
           +  +  KK +C  L
Sbjct: 121 EPPEPTKKRKCRFL 134


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 79.8 bits (188), Expect = 2e-16
 Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 16/167 (9%)

Query: 565 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 623
           KLV++G+ A GK+ L++ F K QF E    T+   ++   + +D   V+  +WDTAGQE 
Sbjct: 26  KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQER 85

Query: 624 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRND 682
           Y  L P+ Y      ++ + + + DS     + W  E+ +   PN+ I L GNK DL N 
Sbjct: 86  YHSLAPMYYRGAQAAIVVYDIQNSDSFAR-AKTWVKELQRQASPNIVIALAGNKADLAN- 143

Query: 683 PATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVF 729
                         V  +E +  A+  N   ++E SAK+   V ++F
Sbjct: 144 -----------SRVVDYEEAKQYADD-NRLLFMETSAKTAVNVNDIF 178


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 31.1 bits (67), Expect = 0.11
 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 4/73 (5%)

Query: 336 EHPLVLYVFSNQYNIQKLFTEQTRSGSISINDTIMFYGVLKLRGGGNNVSVYACREKPLV 395
           E  L+L+ F+NQYN++KL T        +  D IMF    K      N  ++   E  L+
Sbjct: 196 ESKLMLFRFNNQYNLEKLTTIDEFPSKDTDYDRIMF---AKFGTTSYNDLLHFSTE-GLM 251

Query: 396 LYLFSNNGEVLSK 408
           +Y F++  +V  K
Sbjct: 252 IYRFNDTAKVFQK 264


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 28.3 bits (60), Expect = 0.78
 Identities = 10/25 (40%), Positives = 17/25 (68%)

Query: 448 KKTIDTFTHKKSCLKKNFAAIGEKL 472
           K+  D F H+ SC+ K+F ++G K+
Sbjct: 801 KELQDKFLHRVSCILKSFLSVGNKV 825


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.137    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 816,771
Number of Sequences: 2123
Number of extensions: 35232
Number of successful extensions: 66
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57
Number of HSP's gapped (non-prelim): 7
length of query: 750
length of database: 516,269
effective HSP length: 69
effective length of query: 681
effective length of database: 369,782
effective search space: 251821542
effective search space used: 251821542
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 51 (24.6 bits)