GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001965-TA|BGIBMGA001965-PA|IPR002086|Aldehyde
dehydrogenase, IPR012394|Aldehyde dehydrogenase NAD(P)-dependent
         (440 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    25   1.1  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   4.3  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   5.7  

>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 5/44 (11%)

Query: 290 VLCTKEIQEKFIQKSKRILKKWFGDDPQKTPDYSRIVNNRHFSR 333
           + C K++QE  +Q+ + +L    GD   K P YS + N ++  R
Sbjct: 12  IACHKDVQETILQEMRDVL----GDIHAK-PTYSDLQNLKYLER 50


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 327 NNRHFSRLQAVLDASRHKIAIGGKYDPGD--KFIDLTILTNVD 367
           N RH + L+      R  +++GG  D GD       TIL +VD
Sbjct: 80  NYRHITELKRRFPGLRVLLSVGGGEDIGDDGNIKYRTILESVD 122


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 317 QKTPDYSRIVNNRHFSRLQAVLDASRHKIAIGGK 350
           Q++ D + + N  H   +Q V +  RH   IG K
Sbjct: 132 QESGDIAGLRNKTHSQPMQGVGNWERHTKGIGAK 165


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.137    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,770
Number of Sequences: 317
Number of extensions: 4529
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 3
length of query: 440
length of database: 114,650
effective HSP length: 59
effective length of query: 381
effective length of database: 95,947
effective search space: 36555807
effective search space used: 36555807
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)