Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001965-TA|BGIBMGA001965-PA|IPR002086|Aldehyde
dehydrogenase, IPR012394|Aldehyde dehydrogenase NAD(P)-dependent
(440 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.) 363 e-100
SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) 133 3e-31
SB_58786| Best HMM Match : Aldedh (HMM E-Value=0) 121 1e-27
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 2e-27
SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 116 3e-26
SB_57708| Best HMM Match : Aldedh (HMM E-Value=0) 106 3e-23
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) 69 6e-12
SB_26122| Best HMM Match : Aldedh (HMM E-Value=0) 69 6e-12
SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0) 58 1e-08
SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16) 56 4e-08
SB_14803| Best HMM Match : Aldedh (HMM E-Value=4.9e-08) 50 4e-06
SB_32640| Best HMM Match : Aldedh (HMM E-Value=4.9e-08) 50 4e-06
SB_20180| Best HMM Match : Aldedh (HMM E-Value=5.3e-08) 49 7e-06
SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14) 48 1e-05
SB_6771| Best HMM Match : Aldedh (HMM E-Value=0) 47 3e-05
SB_19772| Best HMM Match : Aldedh (HMM E-Value=5.9e-12) 42 8e-04
SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05) 36 0.065
SB_52934| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.1
SB_17602| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.1
SB_48435| Best HMM Match : Ion_trans (HMM E-Value=1.7e-11) 31 1.9
SB_51849| Best HMM Match : Pedibin (HMM E-Value=3.4) 31 2.5
SB_43829| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.3
SB_52521| Best HMM Match : SAM_2 (HMM E-Value=5.2) 29 7.5
SB_58880| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_23033| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_6804| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5
SB_361| Best HMM Match : DUF1122 (HMM E-Value=0.5) 29 7.5
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.9
SB_3481| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1) 29 9.9
SB_30067| Best HMM Match : Aldedh (HMM E-Value=1.4) 29 9.9
SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.9
>SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 363 bits (893), Expect = e-100
Identities = 166/363 (45%), Positives = 247/363 (68%), Gaps = 2/363 (0%)
Query: 73 LYRMYEENANLMLDVLYQDLRRSKTESLLLEIDYMKNDLKHVLYNLDSWTKPERPDRDFV 132
+ ++ +++ + ++ L +DL + + E+++ EI KND L L W KP+ + V
Sbjct: 1 MVQLLDKHEDEIVAALKKDLCKPRQETVIAEILLAKNDAILALEKLSEWMKPQPVETGIV 60
Query: 133 NWLDQVFIYHDPYGVVLIIGAWNYPLALSLLPMAGAIAAGNTVIVKPSEISPASARFIVE 192
N +D +I ++P GV LII AWNYP+ L LP+ GAIA GN ++KPSE++ A+A+ + +
Sbjct: 61 NKMDTCYIKNEPLGVALIISAWNYPVQLIFLPLVGAIAGGNCAVLKPSEVASATAQLVAD 120
Query: 193 YIPKYLDNDAVIIIEGGPQETTKLLSHRFDYIFYTGSTNIGKIIYASAAKHLTPVTLELG 252
+PKYLD D ++ GG ET +LL+ +FD IFYTG + +GK++ A+AAK+LT VTLELG
Sbjct: 121 LVPKYLDPDCYPVVNGGVPETQQLLNQKFDKIFYTGGSAVGKLVMAAAAKNLTRVTLELG 180
Query: 253 GKSPVYIDDTADLEMTVDRILWGKFINAGQTCIAPDYVLCTKEIQEKFIQKSKRILKKWF 312
GKSP YID+ D++ RI WGKF N+GQTC+APDYVLC IQ KFI+ K L +++
Sbjct: 181 GKSPCYIDEDCDMKTVARRICWGKFTNSGQTCVAPDYVLCNPGIQSKFIKSMKETLYEFY 240
Query: 313 GDDPQKTPDYSRIVNNRHFSRLQAVLDASRHKIAIGGKYDPGDKFIDLTILTNVDVNDKI 372
G+DP + DY RIVN++H++RL+A+L +R I +GG D +++I TILT V +D +
Sbjct: 241 GEDPHDSADYGRIVNDKHYNRLKALL--TRGTIVLGGDTDDKERYISPTILTGVKPSDPV 298
Query: 373 MEDEIFGPLLAICVVKDINEALKFINERGKPLVLYVFSSSEKVHKIFASHTSSGSICFND 432
ME+EIFGP+L I V +++A+ FIN+R KPL LY+FS+ ++ K +TSSG C ND
Sbjct: 299 MENEIFGPILPIVSVDSLDDAIDFINDRDKPLALYIFSNKQESIKRIQENTSSGGFCAND 358
Query: 433 TIV 435
++
Sbjct: 359 VVI 361
>SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 133 bits (321), Expect = 3e-31
Identities = 85/299 (28%), Positives = 154/299 (51%), Gaps = 8/299 (2%)
Query: 138 VFIYHDPYGVVLIIGAWNYPLALSLLPMAGAIAAGNTVIVKPSEISPASARFIVEYIPKY 197
V+ H+P G+V I WN+PL ++ + +A A+A GN VI+KP+E +P +A + + +
Sbjct: 461 VYTRHEPVGLVGAITPWNFPLNMASVKIAPALACGNVVILKPAEQTPLTALYFCALVKEA 520
Query: 198 -LDNDAVIIIEG-GPQETTKLLSHR-FDYIFYTGSTNIGKIIY-ASAAKHLTPVTLELGG 253
V +I G GP + +H D + +TGST +G++I ASA +L +TLELGG
Sbjct: 521 GFPAGVVNVIPGYGPTAGAAITTHLDIDKVSFTGSTEVGRLIQEASAKSNLKRLTLELGG 580
Query: 254 KSPVYIDDTADLEMTVDRILWGKFINAGQTCIAPDYVLCTKEIQEKFIQKSKRILKKWFG 313
KSP + +D++ V+ F N GQ C A I ++F++KS + K
Sbjct: 581 KSPNIVFADSDMDYAVEMAHEALFFNQGQCCSAGSRTFVQDTIYDEFVKKSVKRAKARTV 640
Query: 314 DDPQKTPDYSRIVNNRHFSRLQAVLDASRH---KIAIGG-KYDPGDKFIDLTILTNVDVN 369
DP + + ++ F ++ ++++ + K+ GG ++ FI T+ ++V +
Sbjct: 641 GDPFDSVEQGPQIDQEQFDKIMDLIESGKKEGAKMQCGGARHGNKGFFIQPTVFSDVTDD 700
Query: 370 DKIMEDEIFGPLLAICVVKDINEALKFINERGKPLVLYVFSSSEKVHKIFASHTSSGSI 428
+I ++EIFGP+ + K ++E ++ N L VF+ + +S +G++
Sbjct: 701 MRIAKEEIFGPVQQLIKFKSVDEVIERANNTTYGLAAGVFTKNIDTAIAVSSGLRAGTV 759
>SB_58786| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 421
Score = 121 bits (291), Expect = 1e-27
Identities = 87/309 (28%), Positives = 151/309 (48%), Gaps = 11/309 (3%)
Query: 137 QVFIYHDPYGVVLIIGAWNYPLALSLLPMAGAIAAGNTVIVKPSEISPASARFIVEYIPK 196
+V I +P GV I WN+P+A+ + + AIA G T+I +PS +P SA + E K
Sbjct: 74 KVLITKEPVGVCASITPWNFPIAMLVRKASSAIACGCTMIARPSGQTPLSALALGELALK 133
Query: 197 YLDNDAV--IIIEGGPQETTKLL-SHRFDYIFYTGSTNIGKIIYASAAKHLTPVTLELGG 253
D V II+ + KL S + +TGST +G+ +Y +AK L ++LELGG
Sbjct: 134 AEIPDGVFNIIVGSSSLISNKLCDSDIIRKLSFTGSTAVGQDLYQKSAKTLKKLSLELGG 193
Query: 254 KSPVYIDDTADLEMTVDRILWGKFINAGQTCIAPDYVLCTKEIQEKFIQKSKRILKKW-F 312
+P I D A+L+ V ++ KF NAGQTC+ + V +I ++FI+K +++
Sbjct: 194 NAPFIIFDDANLDKAVSGLINSKFRNAGQTCVCANRVFVDSKIYDQFIEKLIPVVQDLKV 253
Query: 313 GDDPQKTPDYSRIVNNRHFSRLQAVLDASRHKIA-----IGGKYDPGDKFIDLTILTNVD 367
G+ + ++N + ++D + ++ A + F++ +L N +
Sbjct: 254 GNGLDSGVNIGPLINQAAIDHAKGLIDDAINQKAQLLYHLEEDRSLNGNFLNPVVLGNCN 313
Query: 368 VNDKIMEDEIFGPLLAICVVKDINEALKFINERGKPLVLYVFS-SSEKVHKIFASHTSSG 426
N +I +EIF P++A+ E + N+ L Y +S ++ +V I A G
Sbjct: 314 SNMRIFNEEIFAPVIAVYKFSTDEEVINLANKTRFGLASYFYSQNTSRVFNI-ADELQYG 372
Query: 427 SICFNDTIV 435
+ N ++
Sbjct: 373 IVGINSGLI 381
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 120 bits (290), Expect = 2e-27
Identities = 106/401 (26%), Positives = 182/401 (45%), Gaps = 20/401 (4%)
Query: 42 KETRQAVQKVRETYNSGVTRCLKWRRKQLRNLYRMYEENANLMLDVLYQDLRRSKTESLL 101
++ AV+ R + S R + L ++ R +++A L+ + D +S E+
Sbjct: 679 QDIEDAVKAARTAFQSWSKLPGHARARHLYSIARHVQKHARLIAVLESMDNGKSVRETRD 738
Query: 102 LEIDYMKNDLKHVLYNLDSWTKPERPDRDFVNWLDQVFIYHDPYGVVLIIGAWNYPLALS 161
+I N +H LY+ W + D + W P GVV I WN+PL L
Sbjct: 739 CDIP---NVARH-LYHHAGWA--QLMDTEMQGW--------KPVGVVGGIVPWNFPLMLL 784
Query: 162 LLPMAGAIAAGNTVIVKPSEISPASARFIVEYIPKY-LDNDAVIIIEGGPQETTKLLSHR 220
+ A+A GNTV++KP+ + SA E + L ++ G ++L H
Sbjct: 785 CWKVCPALAMGNTVVLKPATYTRLSALLFAEICAEAGLPPGVFNVVTGNGAFGSQLAGHP 844
Query: 221 -FDYIFYTGSTNIGKIIYASAAKHLTPVTLELGGKSPVYIDDTADLEMTVDRILWGKFIN 279
D + +TGST +GK++ A ++LELGGKSP + D+ADL+ V+ ++ + N
Sbjct: 845 DVDKVAFTGSTEVGKLLRQLTAGSGKKLSLELGGKSPFVVFDSADLDSAVEGVVDAIWFN 904
Query: 280 AGQTCIAPDYVLCTKEIQEKFIQKSK-RILKKWFGDDPQKTPDYSRIVN-NRHFSRLQAV 337
GQ C A +L + ++ I+K K R+ GD K+ D IV+ ++ S + V
Sbjct: 905 QGQVCSAGSRLLVQETCAQRMIKKIKERMTHLRLGDPLDKSIDMGAIVDPSQQKSVAKMV 964
Query: 338 LDASRHKIAIGGKYD--PGDKFIDLTILTNVDVNDKIMEDEIFGPLLAICVVKDINEALK 395
+A + K P + T++TNV KI+ +E+FGP+L + + EA+
Sbjct: 965 EEARAEGAEVYQKCASLPSGCYYPPTLITNVQPVSKIVMEEVFGPVLVVLTFRTAKEAVA 1024
Query: 396 FINERGKPLVLYVFSSSEKVHKIFASHTSSGSICFNDTIVF 436
N L V++ + + +G++ N +F
Sbjct: 1025 IANNTNFGLGASVWTENLSLAMEVGLSMKAGAVWINGHNLF 1065
Score = 31.5 bits (68), Expect = 1.4
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 142 HDPYGVVLIIGAWNYPLALSLLPMAGAIAAGNTVIVKPSEISPASA 187
H+P GV+ I L + +A AI GNTV++ PSE P A
Sbjct: 1289 HEPVGVIGIACPDECSLLAFVSLLAPAIIRGNTVVIVPSEKYPVVA 1334
>SB_12802| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 880
Score = 116 bits (280), Expect = 3e-26
Identities = 85/294 (28%), Positives = 146/294 (49%), Gaps = 17/294 (5%)
Query: 143 DPYGVVLIIGAWNYPLALSLLPMAGAIAAGNTVIVKPSEISPASARFIVEYIPKY-LDND 201
+P GVV IGAWNYP+ + +A AIA GNT++ KPS ++P +A + + + + +
Sbjct: 409 EPLGVVGGIGAWNYPIQTACWKIAPAIACGNTIVYKPSPLTPMNAVALADILTEAGVPPG 468
Query: 202 AVIIIEGGPQETTKLLSH--RFDYIFYTGSTNIGKIIYASAAKHLTPVTLELGGKSPVYI 259
V II+GG ET ++LS + +TGS G+ I AS A + VTLELGGKSP+ I
Sbjct: 469 VVNIIQGGG-ETGEMLSKDPNVAKVSFTGSVPTGQKIMASCADGIKHVTLELGGKSPLII 527
Query: 260 DDTADLEMTVDRILWGKFINAGQTCIAPDYVLCTKEIQEKFIQKSKRILKKWFGDDPQKT 319
AD+ V L F++ GQ C V I+++F++K K DP
Sbjct: 528 FKDADMANAVSGALMANFLSQGQVCSNGTRVFVEDSIKDEFLEKVVERTKNIRVGDPM-A 586
Query: 320 PD--YSRIVNNRHFSRLQAVLDASRH---KIAIGGKY----DP--GDKFIDLTILTNVDV 368
PD ++++ H +++ + + K+ GG+ +P ++ ++
Sbjct: 587 PDTQMGAMISSAHLNKVLDYVQIGKDEGAKVLCGGERLHLPEPLTSGYYMSPCVMAECTD 646
Query: 369 NDKIMEDEIFGPLLAICVVKDINEALKFINERGKPLVLYVFSSS-EKVHKIFAS 421
+ ++++EIFGP++ + + EA+ N L +F+ + H++ S
Sbjct: 647 DMTVVKEEIFGPVMTVLTFQTEEEAVTRANNTTFGLAGGIFTRDLNRAHRVIGS 700
>SB_57708| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 528
Score = 106 bits (255), Expect = 3e-23
Identities = 87/333 (26%), Positives = 151/333 (45%), Gaps = 16/333 (4%)
Query: 120 SWTKPERPDRD--FVNWLDQVFIYHDPYGVVLIIGAWNYPLALSLLPMAGAIAAGNTVIV 177
+W K +R W + + + +L WN+PL + A A+AAG TVI+
Sbjct: 113 TWKKTTAKERSEKLRKWFQLILQHQNELAELLTTEQWNFPLGMITRKAAAALAAGCTVII 172
Query: 178 KPSEISPASARFIVEY-----IPKYLDNDAVIIIEGGPQET-TKLLSHRFDYIFYTGSTN 231
KPSE +P A + + P + N + + T T L S + +TGST
Sbjct: 173 KPSEETPFCALALQQLAEEAGFPAGVINTIPCSRDRVNEVTDTVLKSDLVSKMSFTGSTA 232
Query: 232 IGKIIYASAAKHLTPVTLELGGKSPVYIDDTADLEMTVDRILWGKFINAGQTCIAPDYVL 291
GKI+ A + ++LELGG +P + ++A++E V L K+ N QTCI + ++
Sbjct: 233 TGKILMAKCVDTVKKMSLELGGNAPFIVFNSANIESAVKGALICKYRNTAQTCICANRII 292
Query: 292 CTKEIQEKFIQKSKRILKKW--FGDDPQKTPDYSRIVNNRHFSRLQA-VLDA--SRHKIA 346
I ++F ++ + + G+ ++N +++ V DA K+
Sbjct: 293 VQDGIYDEFAKRFAEAVDQQLKIGNGMDAGTTQGPLINKMAVEKVERHVADALSKGAKLM 352
Query: 347 IGGKYDP-GDKFIDLTILTNVDVNDKIMEDEIFGPLLAICVVKDINEALKFINERGKPLV 405
GG P G+ F + T+LT+V + + ++E FGPL + K EA+ N L
Sbjct: 353 RGGHRHPQGENFFEPTVLTDVSPDMLVCKEETFGPLAPLVRFKTEAEAVAIANSTQSGLA 412
Query: 406 LYVFSSS-EKVHKIFASHTSSGSICFNDTIVFT 437
Y +S +V ++ A G + N++++ T
Sbjct: 413 GYFYSQDLSQVWRV-AEALEVGLVGVNESMIST 444
>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
Length = 275
Score = 69.3 bits (162), Expect = 6e-12
Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
Query: 143 DPYGVVLIIGAWNYPLALSLLPMAGAIAAGNTVIVKPSEISPASARFIVEYIPKY-LDND 201
+P GVV II WN+P A +A A+A GN ++ KP+ PASA + E I + L
Sbjct: 140 EPVGVVGIITPWNFPTATGAWKIAPALAFGNAIVWKPANQVPASAWALTEIISRQNLPAG 199
Query: 202 AVIIIEGGPQETTKLL--SHRFDYIFYTGSTNIGKIIYASAAKHLTPVTLELGGKSPVYI 259
++ G + ++ S + + +TGS G+ + A+ A +L LE+G K+ + +
Sbjct: 200 TFNLVMGPGADVGDVMINSRGINALTFTGSLETGRKVAAATAVNLVKCQLEMGSKNALIV 259
Query: 260 DDTADLEMTVD 270
D ADL+ V+
Sbjct: 260 LDDADLDNAVE 270
>SB_26122| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 462
Score = 69.3 bits (162), Expect = 6e-12
Identities = 67/291 (23%), Positives = 132/291 (45%), Gaps = 19/291 (6%)
Query: 146 GVVLIIGAWNYPLALSLLPMAGAIAAGNTVIVKPSEISPASARFIVEYI-PKYLDNDAVI 204
GVV II +W+ L L + A+A+GN V++KPS ++P + + + + + V
Sbjct: 153 GVVAIITSWSQALPSILRHLVPAMASGNCVVIKPSCLAPLTVHLLAKVLKDSGIPKGVVN 212
Query: 205 IIEGGPQETTKLLSHRFDY--IFYTGSTNIGKIIYASAAKHLTPVTLELGGKSPVYIDDT 262
I+ G + ++L+ D + GS + + + V+ ELG + + D
Sbjct: 213 IVYGRGEVIGRILARHHDVAAVALVGSERAAFSVTMESGPRVKRVSYELGNCHAMVVYDD 272
Query: 263 ADLEMTVDRILWGKFI-NAGQTCIAPDYVLCTKEIQEKFIQKSKRILKKWFGDDPQKT-- 319
DL+ + ++ F+ NAGQ A + + + E F +K + ++K +PQ++
Sbjct: 273 VDLDELIPTVIKASFLCNAGQHPHAVNRIFVHGAVLEIFTEKLVKAIRKIKIGNPQESST 332
Query: 320 ---PDYSRIVNNRHFSRLQAVLDASRHKIAIGG------KYDPGDKFIDLTILTNV--DV 368
P S+ + +Q ++ I GG K D G F++ T+L +
Sbjct: 333 QIGPLISKEQKQTVLALIQGAINDGAKVIHGGGSPKLDSKLDRG-FFVEPTVLGGFKNSM 391
Query: 369 NDKIMEDEIFGPLLAICVVKDINEALKFINERGKPLVLYVFS-SSEKVHKI 418
++ I + E+ GP++ I + +EAL +N L ++S ++ H++
Sbjct: 392 DNPINQLEVQGPVVRIIPFRSESEALSGVNVTAYGLSASIWSKDGQRAHRL 442
>SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0)
Length = 1485
Score = 58.4 bits (135), Expect = 1e-08
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 232 IGKIIYASAAK-HLTPVTLELGGKSPVYIDDTADLEMTVDRILWGKFINAGQTCIAPDYV 290
+G++I +AAK +L VTLELGGKSP + ADL+ V+ G FIN GQ C A +
Sbjct: 1390 VGRLIQETAAKSNLKRVTLELGGKSPNIVFADADLDWAVEMSCLGLFINQGQCCCAGTRI 1449
Query: 291 LCTKEIQEKFIQKSKRILKKWFGDDP 316
+ I ++F+++ K DP
Sbjct: 1450 FVEESIHDEFVRQCVARAKARVVGDP 1475
Score = 50.4 bits (115), Expect = 3e-06
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 142 HDPYGVVLIIGAWNYPLALSLLPMAGAIAAGNTVIVKPSEISPASARFIVEYI 194
H+P GVV I WN+PL + L +A A+A G VI+KP+E +P +A ++ +
Sbjct: 1335 HEPVGVVGAITPWNFPLLMEGLKLAPALACGCVVILKPAEQTPLTALYLASLV 1387
>SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16)
Length = 266
Score = 56.4 bits (130), Expect = 4e-08
Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 144 PYGVVLIIGAWNYPLALSLLPMAGAIAAGNTVIVKPSEISPASARFIVEYIPKYLDNDAV 203
P GV +I WN PL L +A A+A+G TV+ KPSE++ +A + E I V
Sbjct: 146 PKGVAGLISPWNLPLYLLSFKIAPAVASGCTVVCKPSEMTSVTAWMMAELINDAGFPPGV 205
Query: 204 I-IIEG-GPQETTKLLSH-RFDYIFYTGSTNIGKIIYASAAKHLTPVTLE 250
I I+ G G + + ++ H I +TGST IG++I +A ++LE
Sbjct: 206 INIVFGTGSRTGSAIVQHPDVHLISFTGSTTIGELITKMSAPFCKKLSLE 255
>SB_14803| Best HMM Match : Aldedh (HMM E-Value=4.9e-08)
Length = 195
Score = 50.0 bits (114), Expect = 4e-06
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 15/178 (8%)
Query: 270 DRILWGK-FINAGQTCIAPD---YVLCTKEIQEKFIQKSKRILKKWFGDDPQKT--PDYS 323
D+ L G F AGQ C+A +V TKE + ++K+K+ LK GD P P S
Sbjct: 20 DQALVGAAFGAAGQRCMALSTAIFVGETKEWIPEIVEKAKQ-LKVSAGDQPGADLGPMIS 78
Query: 324 RIVNNRHFSRLQ------AVLDASRHKIAIGGKYDPGDKFIDLTILTNVDVNDKIMEDEI 377
R +Q A LD I + G Y+ G+ F+ T+L+NV ++EI
Sbjct: 79 PQAKKRACDLVQSGVEQGASLDLDGRDIVVKG-YENGN-FVGPTVLSNVTPEMTCYKEEI 136
Query: 378 FGPLLAICVVKDINEALKFINERGKPLVLYVFSSSEKVHKIFASHTSSGSICFNDTIV 435
FGP+L + +A++ IN +F+ S + + FA + G I N +V
Sbjct: 137 FGPVLVALNADTLEDAVEIINRNPYGNGTAIFTKSGAIARKFAQKANVGQIGINVPVV 194
>SB_32640| Best HMM Match : Aldedh (HMM E-Value=4.9e-08)
Length = 195
Score = 50.0 bits (114), Expect = 4e-06
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 15/178 (8%)
Query: 270 DRILWGK-FINAGQTCIAPD---YVLCTKEIQEKFIQKSKRILKKWFGDDPQKT--PDYS 323
D+ L G F AGQ C+A +V TKE + ++K+K+ LK GD P P S
Sbjct: 20 DQALVGAAFGAAGQRCMALSTAIFVGETKEWIPEIVEKAKQ-LKVSAGDQPGADLGPMIS 78
Query: 324 RIVNNRHFSRLQ------AVLDASRHKIAIGGKYDPGDKFIDLTILTNVDVNDKIMEDEI 377
R +Q A LD I + G Y+ G+ F+ T+L+NV ++EI
Sbjct: 79 PQAKKRACDLVQSGVEQGASLDLDGRDIVVKG-YENGN-FVGPTVLSNVTPEMTCYKEEI 136
Query: 378 FGPLLAICVVKDINEALKFINERGKPLVLYVFSSSEKVHKIFASHTSSGSICFNDTIV 435
FGP+L + +A++ IN +F+ S + + FA + G I N +V
Sbjct: 137 FGPVLVALNADTLEDAVEIINRNPYGNGTAIFTKSGAIARKFAQKANVGQIGINVPVV 194
>SB_20180| Best HMM Match : Aldedh (HMM E-Value=5.3e-08)
Length = 266
Score = 49.2 bits (112), Expect = 7e-06
Identities = 42/175 (24%), Positives = 83/175 (47%), Gaps = 4/175 (2%)
Query: 242 KHLTPVTLELGGKSPVYIDDTADLEMTVDRILWGKFINAGQTCIAPDYVLCTKEIQEKFI 301
K+ + L L K+P + D+++ V + G GQ C A + ++I E+F
Sbjct: 6 KNRLRLVLGLEAKNPGIVLPDCDIDLAVRECVNGALAFNGQRCTALKILFVHEDIVEEFN 65
Query: 302 QKS-KRILKKWFGDDPQKTPDYSRIVNNRHFSRLQAVLDASRHKIAIGGKYDPGDK---F 357
QK +++ +G+ + + + + + +Q ++ ++ K A + G++ F
Sbjct: 66 QKFIEQVENLKYGNPWETGVNITPLPEPHKPAYIQELIKDAQEKGAKVINKNGGERQESF 125
Query: 358 IDLTILTNVDVNDKIMEDEIFGPLLAICVVKDINEALKFINERGKPLVLYVFSSS 412
+ IL V+ KI E+E FGP++ I KDI E L +++E + +FS +
Sbjct: 126 VYPAILYPVNSTMKIYEEEQFGPVVPILSFKDIQEPLDYVSESNYGQQVSLFSKN 180
>SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14)
Length = 266
Score = 48.4 bits (110), Expect = 1e-05
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 38 KSNPKETRQAVQKVRETYNSGVTRCLK--WRRKQLRNLYRMYEENANLMLDVLYQDLRRS 95
++ +E +AV R+ ++ +K R+K L N + E+NA L+ ++ D +S
Sbjct: 77 RAGQREIDRAVMAARQAFDDSPWSRIKPVERQKLLWNFADLIEKNAALLAEIESIDNGKS 136
Query: 96 KTES----LLLEID---YMKNDLKHVLYNLDSWTKPERPDRDFVNWLDQVFIYHDPYGVV 148
+ + L +D YM + + P PD F + + + GVV
Sbjct: 137 AVIAEHVDIRLAVDFLRYMAGFATKIEGRTVQVSVPFMPDAQFHGYTRR-----EAVGVV 191
Query: 149 LIIGAWNYPLALSLLPMAGAIAAGNTVIVKPSEISPASARFIVE 192
I AWN+PL L+ + A+A G T ++KP+E +P +A + E
Sbjct: 192 GAIVAWNFPLLLACWKLGPALATGCTTVLKPAEDTPLTALKLAE 235
>SB_6771| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 523
Score = 46.8 bits (106), Expect = 3e-05
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 11/172 (6%)
Query: 227 TGSTNIGKIIYASAAKHLTPVTLELGGKSPVYIDDTADLEMTVDRILWGKFINAGQTCIA 286
T S ++ + + + + + E GGK+ ++ +ADL++ V+ + F GQ C A
Sbjct: 251 TTSPHLAAVNFTGSVETYPKLVGECGGKNYHFVHMSADLDVVVNSTIRAAFGYQGQKCSA 310
Query: 287 PDYVLCTK----EIQEKFIQKSKRILKKWFGDDPQKTPDYSRIVNNRHFSRLQAVLD--A 340
+ K EI+E + + K K D T + +++ F ++ LD
Sbjct: 311 CSRLYVPKSRWPEIKEALLAELK-TAKMGSPVDIDNT-FMTAVIDEASFDNIKTYLDFCK 368
Query: 341 SRHKIAI--GGKYDPG-DKFIDLTILTNVDVNDKIMEDEIFGPLLAICVVKD 389
S +I + GG D F++ TI+ + +K+M++EIFGP++ V D
Sbjct: 369 SSDEITVLAGGNCDKSVGYFVEPTIVETSNPYNKMMKEEIFGPVVCAYVYPD 420
>SB_19772| Best HMM Match : Aldedh (HMM E-Value=5.9e-12)
Length = 211
Score = 42.3 bits (95), Expect = 8e-04
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
Query: 299 KFIQKSKRILKKWFGDDPQKTPDYSRIVNNRHFSRLQAVLDASRH---KIAIGGKYDPGD 355
+F K R W KT + V+ +++ ++++ R K+ +GG GD
Sbjct: 51 EFTIKCYRYYAGWADKIHGKTIPLGK-VDGEQMTKILNLIESGRKEGAKLEVGGDR-AGD 108
Query: 356 K--FIDLTILTNVDVNDKIMEDEIFGPLLAICVVKDINEALKFINE 399
K FI T+ ++V N +I ++EIFGP++ I KD+N+ ++ N+
Sbjct: 109 KGYFIQPTVFSDVQDNMRIAQEEIFGPVMQIFRFKDMNDIIERANK 154
>SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05)
Length = 301
Score = 35.9 bits (79), Expect = 0.065
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 225 FYTGSTNIGKIIYASAAKHLTPVTLELGGKSPVYIDDTADLEMTVDRILWGKFINAGQ 282
F T KI+ A + ++LELGG +P + ++AD++ V+ + KF N Q
Sbjct: 144 FQTWKKTTAKILMAKCVVTVKKMSLELGGNAPFVVFNSADIDKAVNGAVVYKFRNTAQ 201
Score = 32.3 bits (70), Expect = 0.80
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 348 GGKYDPGDKFIDLTILTNVDVNDKIMEDEIFGPLLAICVVKDINEALKF 396
G ++ G+ F + T+LT+V+ + + +E FGPL + + D + F
Sbjct: 220 GHRHPQGENFFEPTVLTDVNQDTLVCMEETFGPLAPLFSLPDNKQVPTF 268
>SB_52934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 31.9 bits (69), Expect = 1.1
Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 9/158 (5%)
Query: 284 CIAPDYVLCTKE-IQEKFIQKSKRILKKWFGDDPQKTP-DYSRIVNNRHFSRLQAVLDAS 341
C D L +E I ++F+ + LKK DP T D+ + H L +
Sbjct: 63 CYGTDGRLFVEESIHDEFVNRLVDELKKLKIGDPLDTATDHGPQNHKAHLDSLVEYVKRG 122
Query: 342 RH---KIAIGGKY-DPGDKFIDLTILTNVDVNDKIMEDEIFGPLLAICVVK--DINEALK 395
K+ GG++ D F + + TNV+ + I ++E FGP++ I D+ L+
Sbjct: 123 VEEGAKLVYGGRHLDRPGFFFEPAVFTNVEDDMFIAKEESFGPVVIISKFDDGDVEGVLE 182
Query: 396 FINERGKPLVLYVFSSSEKVHKIFASHTSSGSICFNDT 433
N L VF+ A +G+ CF +T
Sbjct: 183 SANGTEYGLASGVFTKDMSKALRVADALEAGT-CFVNT 219
>SB_17602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 422
Score = 31.9 bits (69), Expect = 1.1
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 181 EISPASARFIVEYIPKYLDNDAVIIIEGGPQETTKLLSHRFDYIFYTGSTNIGKII 236
EISP + Y +YL N AVI P T S R Y +Y NIGK I
Sbjct: 234 EISPLIFSLFLTYFCEYLSNHAVITTLAFPNST---FSPRDHYPYYILIYNIGKFI 286
>SB_48435| Best HMM Match : Ion_trans (HMM E-Value=1.7e-11)
Length = 1496
Score = 31.1 bits (67), Expect = 1.9
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Query: 298 EKFIQKSKRILKKWFGDDPQ--KTPDYSRIVNNRHFSRLQAVLDASRHKIAIGGKYDPGD 355
E+ Q+ + +L F PQ + P Y +I + + +A +A+ D GD
Sbjct: 1216 ERLFQQGQELLPLLFSLIPQNQRRPIYLQIYKG-YVDDPRNTDNAWMETVAVNFHDDKGD 1274
Query: 356 KFIDLTILTNVD---VNDKIMEDEIFGPLLAICVVKDINEALKFINERGKPLVLYVFSSS 412
F D+T+ N+ N +I+ E + + A+ VK ++ G + S+
Sbjct: 1275 LFGDITLQVNISRGLPNTRIVYIENY-EVAAVVKVKTACMTKTCCSQWGMAITRITLISN 1333
Query: 413 EKVHKIFASHTSSGS 427
I ASHTS G+
Sbjct: 1334 AITFSILASHTSFGT 1348
>SB_51849| Best HMM Match : Pedibin (HMM E-Value=3.4)
Length = 229
Score = 30.7 bits (66), Expect = 2.5
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 36 EEKSNPKETRQAVQKVRETYNSGVTRCLKWRRKQLRNLYRMYEENANLMLDVLYQDLRRS 95
+E+S PKE Q + E S + WR Q R L R Y + +L D+R S
Sbjct: 109 QERSPPKEQEQKEEHPNEVTGSSNKPSMNWR--QGRQLLRQYLQEVGYTDAIL--DVRSS 164
Query: 96 KTESLL 101
+ S+L
Sbjct: 165 RVRSIL 170
>SB_43829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 22 VTRNF-TEAEIRQSVEEKSNPKETRQAVQKVRETYNSGVTRCLKWRRKQLRNLYRMYEEN 80
+TRN+ T+ ++R + ++ T+ V E N+ V ++W RK + ++ YEE
Sbjct: 54 LTRNYDTDTKVRSGLI-RNRTSGTKPGVVISAEVLNAHVLPGIRWVRKDIADIAPAYEEA 112
Query: 81 ANLML 85
++L
Sbjct: 113 VGVLL 117
>SB_52521| Best HMM Match : SAM_2 (HMM E-Value=5.2)
Length = 150
Score = 29.1 bits (62), Expect = 7.5
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 22 VTRNFTEAEIRQSVEE-KSNPKETRQAVQKVRETYNSGVTRCLKWRRKQLRNLYRMYE 78
+ +++ E +R +VEE K N ET+QA+ V E G+T L R+ ++ L + E
Sbjct: 5 IFKSWCEESVRSAVEELKINYLETKQALLLVSEEDLKGLTFTLGQRKLLMKALTDLQE 62
>SB_58880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1098
Score = 29.1 bits (62), Expect = 7.5
Identities = 21/98 (21%), Positives = 46/98 (46%)
Query: 28 EAEIRQSVEEKSNPKETRQAVQKVRETYNSGVTRCLKWRRKQLRNLYRMYEENANLMLDV 87
E +I+Q E++ E + V + + + + + + ++ E +ANL +
Sbjct: 250 EKKIQQLEEKEKQLMEKNKDVNETKSKMDVAKSELEIYNSQHKNAQTQLREAHANLESVI 309
Query: 88 LYQDLRRSKTESLLLEIDYMKNDLKHVLYNLDSWTKPE 125
Q R+S+ +S+ E+ +KN+LK +L+ + E
Sbjct: 310 QKQTQRKSEIKSIEKELPDLKNNLKKAEADLEKAVQGE 347
>SB_23033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 29.1 bits (62), Expect = 7.5
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 27 TEAEIRQSVEEKSNPKETRQAVQKVRETYNSGVTRCLKWRRKQLRNLYRMYEENANLMLD 86
T + +++ T Q V+ VR Y + RC + + R LYR+++ ++ D
Sbjct: 9 TPTQTTATIDSTLYTYSTEQKVRTVR-LYKADSARCTDYSNNRQRALYRLHQTDSAHCTD 67
Query: 87 VLYQDLRRSKT 97
Q R ++T
Sbjct: 68 FTRQIARNAQT 78
>SB_6804| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 29.1 bits (62), Expect = 7.5
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 27 TEAEIRQSVEEKSNPKETRQAVQKVRETYNSGVTRCLKWRRKQLRNLYRMYEENANLMLD 86
T + +++ T Q V+ VR Y + RC + + R LYR+++ ++ D
Sbjct: 9 TPTQTTATIDSTLYTYSTEQKVRTVR-LYKADSARCTDYSNNRQRALYRLHQTDSAHCTD 67
Query: 87 VLYQDLRRSKT 97
Q R ++T
Sbjct: 68 FTRQIARNAQT 78
>SB_361| Best HMM Match : DUF1122 (HMM E-Value=0.5)
Length = 528
Score = 29.1 bits (62), Expect = 7.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 316 PQKTPDYSRIVNNRHFSRLQAVLDASRHKIAIGGKYDPGDKFIDLTILT 364
P+ T D I NR+ + + + ++ IGGKYD K +L LT
Sbjct: 356 PEGTTDGVSIQYNRYLKKDEKLSSVDEPQLVIGGKYDRVSKNDNLANLT 404
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 28.7 bits (61), Expect = 9.9
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 8/80 (10%)
Query: 179 PSEISPASARFIVEYIPKYLDNDAVIIIEGGPQETTKLLSHRFDYIFYTGSTNIGKIIYA 238
P ISP+S F P N A + G + +LLS F+ G+ N I
Sbjct: 247 PRPISPSSPSFSFNSNPNQKTNWATTTPKSGRSSSAELLSP-----FFAGNNNSSNTISP 301
Query: 239 SAAKHLTPVTLELGGKSPVY 258
+ H ELGG +P +
Sbjct: 302 DSGIHCRD---ELGGGTPAF 318
>SB_3481| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1)
Length = 1347
Score = 28.7 bits (61), Expect = 9.9
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 340 ASRHKIAIGGKYDPGDKFIDLTILTNVDVNDKIMEDEIFGPLLAICVVKDINEALKFINE 399
+SR K GG Y+ K +DL +LT +N + + G + CV + +K + E
Sbjct: 389 SSRKKEVDGGSYER-KKIVDLALLTPTKLNTTVNDQATPGKEPSHCVQQGFTTPVKSLLE 447
Query: 400 RGK 402
K
Sbjct: 448 TSK 450
>SB_30067| Best HMM Match : Aldedh (HMM E-Value=1.4)
Length = 119
Score = 28.7 bits (61), Expect = 9.9
Identities = 20/115 (17%), Positives = 48/115 (41%), Gaps = 13/115 (11%)
Query: 277 FINAGQTCIAPDYVLCTKEIQEKFIQKSKRILKKWFGDDPQKTPDY-SRIVNNRHFSRLQ 335
F N G+ C+ + + I + F+ + +K P + + +++ H +++
Sbjct: 4 FANQGEICLCTSRIFVQRSIYDNFLDMFVQETRKLIVGPPTENSSFMGALISKDHLEKVK 63
Query: 336 AVLDASRH---KIAIGGKYDP---------GDKFIDLTILTNVDVNDKIMEDEIF 378
+ ++ + G DP F+ T++T+V + + M++EIF
Sbjct: 64 GYIRIAKEDGGTVLCGESKDPPPDLPKEYKNGYFMRPTVITDVKDSSRCMQEEIF 118
>SB_403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1357
Score = 28.7 bits (61), Expect = 9.9
Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Query: 377 IFGPLLAICVVKDINEALKFI--NERGKPLVLYVFSSSEKVHKIFASHTSSGSICFNDTI 434
I GP V+KD N ALKF+ E G P S + V K+FA + G + D I
Sbjct: 508 IVGPKKETIVLKDANGALKFLIAKEPGMP------SPALFVRKVFAPPSQVGGLEPGDEI 561
Query: 435 VFTGG 439
V G
Sbjct: 562 VGING 566
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.137 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,898,403
Number of Sequences: 59808
Number of extensions: 639605
Number of successful extensions: 1618
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1578
Number of HSP's gapped (non-prelim): 36
length of query: 440
length of database: 16,821,457
effective HSP length: 84
effective length of query: 356
effective length of database: 11,797,585
effective search space: 4199940260
effective search space used: 4199940260
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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