GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001965-TA|BGIBMGA001965-PA|IPR002086|Aldehyde
dehydrogenase, IPR012394|Aldehyde dehydrogenase NAD(P)-dependent
         (440 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            30   0.14 
CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein ...    27   1.0  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   7.1  
AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    24   9.4  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    24   9.4  

>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 29.9 bits (64), Expect = 0.14
 Identities = 17/63 (26%), Positives = 28/63 (44%)

Query: 288  DYVLCTKEIQEKFIQKSKRILKKWFGDDPQKTPDYSRIVNNRHFSRLQAVLDASRHKIAI 347
            D +L   ++ +  I+K K      +G+     P Y  I NN    RL+  +D S+   +I
Sbjct: 2966 DEILAIDKLLKGTIRKKKHRRSIEYGNMTSILPSYHNITNNNSVMRLEYCIDCSQDASSI 3025

Query: 348  GGK 350
              K
Sbjct: 3026 TSK 3028


>CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein
          protein.
          Length = 207

 Score = 27.1 bits (57), Expect = 1.0
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)

Query: 25 NFTEAEIRQSVEEKSNPKETRQAVQKVRETY--NSGVTRCLKWRRK 68
          NFT++ I +   EKSN    ++ ++K R      SGV R  +  R+
Sbjct: 17 NFTKSAINRKRPEKSNGSTVKKTIRKRRPALRSTSGVLRAARPERR 62


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 7.1
 Identities = 11/20 (55%), Positives = 12/20 (60%)

Query: 353  PGDKFIDLTILTNVDVNDKI 372
            PGDKF+ L   TN D  D I
Sbjct: 1104 PGDKFMRLPSYTNQDEKDLI 1123


>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 23.8 bits (49), Expect = 9.4
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 4/42 (9%)

Query: 245 TPVTLELGGKSPVYIDDTADLEMTVDRILWGKFINAGQTCIA 286
           TP T E  G+ P  I      E   DR  WGK +    +CIA
Sbjct: 57  TPATGEDAGRVPTSIIP----EPNADRDQWGKGVEFLLSCIA 94


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.8 bits (49), Expect = 9.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)

Query: 289 YVLCTKEIQEKFIQKSKRILKKW 311
           Y +  KE+Q+KF+ +   ILK +
Sbjct: 796 YAVIKKELQDKFLHRVSCILKSF 818


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.137    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 457,901
Number of Sequences: 2123
Number of extensions: 19473
Number of successful extensions: 78
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 73
Number of HSP's gapped (non-prelim): 6
length of query: 440
length of database: 516,269
effective HSP length: 66
effective length of query: 374
effective length of database: 376,151
effective search space: 140680474
effective search space used: 140680474
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)