Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001963-TA|BGIBMGA001963-PA|IPR000886|Endoplasmic
reticulum targeting sequence, IPR002018|Carboxylesterase, type B
(409 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g15860.2 68418.m01856 expressed protein 36 0.065
At5g15860.1 68418.m01855 expressed protein 36 0.065
At3g02410.1 68416.m00228 hypothetical protein weak similarity to... 35 0.086
At1g26120.1 68414.m03188 esterase-related contains similaity to ... 34 0.20
At5g18130.2 68418.m02128 expressed protein similar to unknown pr... 32 0.80
At5g18130.1 68418.m02129 expressed protein similar to unknown pr... 32 0.80
At2g18193.1 68415.m02117 AAA-type ATPase family protein contains... 31 1.1
At4g37880.1 68417.m05357 expressed protein 31 1.4
At4g16490.1 68417.m02496 armadillo/beta-catenin repeat family pr... 31 1.4
At2g18190.1 68415.m02116 AAA-type ATPase family protein contains... 30 2.4
At3g06290.1 68416.m00722 SAC3/GANP family protein contains Pfam ... 29 7.4
At5g57450.2 68418.m07178 DNA repair family protein contains simi... 28 9.8
At5g57450.1 68418.m07177 DNA repair family protein contains simi... 28 9.8
At1g30510.3 68414.m03730 ferredoxin--NADP(+) reductase, putative... 28 9.8
At1g30510.2 68414.m03732 ferredoxin--NADP(+) reductase, putative... 28 9.8
At1g30510.1 68414.m03731 ferredoxin--NADP(+) reductase, putative... 28 9.8
>At5g15860.2 68418.m01856 expressed protein
Length = 299
Score = 35.5 bits (78), Expect = 0.065
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 9 DLVLGLEWINGNIEKFGGDRERITLMGSQGGA-AAVDLLMHSSAKKL 54
D G+ ++ NI FGGD RI LMG GA A L+ + K+L
Sbjct: 207 DASQGISFVCNNISAFGGDPNRIYLMGQSAGAHIAACALLEQATKEL 253
>At5g15860.1 68418.m01855 expressed protein
Length = 427
Score = 35.5 bits (78), Expect = 0.065
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 9 DLVLGLEWINGNIEKFGGDRERITLMGSQGGA-AAVDLLMHSSAKKL 54
D G+ ++ NI FGGD RI LMG GA A L+ + K+L
Sbjct: 207 DASQGISFVCNNISAFGGDPNRIYLMGQSAGAHIAACALLEQATKEL 253
>At3g02410.1 68416.m00228 hypothetical protein weak similarity to
kynurenine formamidase [Mus musculus] GI:21552719
Length = 422
Score = 35.1 bits (77), Expect = 0.086
Identities = 24/76 (31%), Positives = 30/76 (39%)
Query: 9 DLVLGLEWINGNIEKFGGDRERITLMGSQGGAAAVDLLMHSSAKKLFSAVILQGGSSWSG 68
D G+ ++ NI FGGD RI LMG GA + A K + S
Sbjct: 202 DAAQGISFVCNNISAFGGDPNRIYLMGQSAGAHISSCALFEQAIKESRGESISWSVSQIK 261
Query: 69 AYLHDNVRERAFNLGE 84
AY + FNL E
Sbjct: 262 AYFGLSGGYNLFNLVE 277
>At1g26120.1 68414.m03188 esterase-related contains similaity to
esterase 6 GI:606998 from [Drosophila simulans] and
esterase GI:12584120 from [Sphingomonas elodea]
Length = 476
Score = 33.9 bits (74), Expect = 0.20
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Query: 7 LRDLVLGLEWINGNIEKFGGDRERITLMGSQGGAAAVDLLMHSSAKKLFSAVILQGGS-- 64
++D G+ ++ +I ++GGD +RI LMG GA H +A + VI + G
Sbjct: 256 VKDASSGISFVCNHIAEYGGDPDRIYLMGQSAGA-------HIAACTIVEQVIKESGEGD 308
Query: 65 --SWSGAYLH 72
SWS + ++
Sbjct: 309 SVSWSSSQIN 318
>At5g18130.2 68418.m02128 expressed protein similar to unknown
protein (gb|AAF00631.1)
Length = 251
Score = 31.9 bits (69), Expect = 0.80
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 305 LKETYLKHDNTMSEDRKTQMKIVKLWSNFAKYRNPTPDNDETLAGLRWSPYTVENEEYLH 364
L E++ T + ++T+ +K+ S A++ +P P NDE + S + E Y
Sbjct: 104 LTESFPSPRITFKKSKETEFADMKIDSPAARFTSPLPQNDERHSD---SEGGLGGESYDE 160
Query: 365 -MDNDFKMKTELNKSKFKFWD--DFISRWEKKAVNGV 398
M ++ + ++L+ K WD + + W KK +NG+
Sbjct: 161 IMGSEVEESSDLSSKKEVDWDEGERTNLW-KKGLNGI 196
>At5g18130.1 68418.m02129 expressed protein similar to unknown
protein (gb|AAF00631.1)
Length = 280
Score = 31.9 bits (69), Expect = 0.80
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 305 LKETYLKHDNTMSEDRKTQMKIVKLWSNFAKYRNPTPDNDETLAGLRWSPYTVENEEYLH 364
L E++ T + ++T+ +K+ S A++ +P P NDE + S + E Y
Sbjct: 104 LTESFPSPRITFKKSKETEFADMKIDSPAARFTSPLPQNDERHSD---SEGGLGGESYDE 160
Query: 365 -MDNDFKMKTELNKSKFKFWD--DFISRWEKKAVNGV 398
M ++ + ++L+ K WD + + W KK +NG+
Sbjct: 161 IMGSEVEESSDLSSKKEVDWDEGERTNLW-KKGLNGI 196
>At2g18193.1 68415.m02117 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 495
Score = 31.5 bits (68), Expect = 1.1
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 308 TYLKHDNTMSEDRKTQMKIVKLWSNFAKYRNPTPDNDETLAGLRWSPYTVENE---EYLH 364
+YL H SE+ K +++VKL+S Y + D+D+ +AG W +E+ + L
Sbjct: 157 SYLTHVVAESEEIKRNLRVVKLYSRDV-YAS---DDDDGMAGGNWGCINLEHPSTFDTLA 212
Query: 365 MDNDFKMKTELNKSKFKFWDDFISRWEKKAVNGVI 399
MD + K K + +F +F R K G +
Sbjct: 213 MDPNAKKKIIDDLERFLKRKEFYKRVGKAWKRGYL 247
>At4g37880.1 68417.m05357 expressed protein
Length = 388
Score = 31.1 bits (67), Expect = 1.4
Identities = 21/99 (21%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 84 EVMNRTASSGHKLIAKLNEVPPDNIVSKDFHACQKEFSKEYQR-SIVTFGPVVEKQPDGL 142
E+++ + K ++ L E P + + D + + K + + +T EK+
Sbjct: 26 EIVHMLSQEIDKALSILEETPSSDTMLLDHRSILADVKKVFMEIAPITQLEATEKELHAA 85
Query: 143 ITEYPEDSEQQIDMPIMIGYNSCEGMDTTLYYLLEPRFF 181
+T+YP+ E+Q++ I Y DT + + FF
Sbjct: 86 LTKYPKVLEKQLNPDISKAYRHNVEFDTHIVNQIIANFF 124
>At4g16490.1 68417.m02496 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 268
Score = 31.1 bits (67), Expect = 1.4
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 6/117 (5%)
Query: 64 SSWSGAYLHDNVRERAFNLGEVMNRTASSGHKLIAKLNEVPPDNIVS--KDFHACQKEFS 121
S ++ +L D+V + LGE+ + ++S + + + E +I DF AC + S
Sbjct: 66 SEYASEFLSDSVID--MRLGELALKNSNSLNSNASSMKEEAFLDISQAFSDFSACSSDIS 123
Query: 122 KEYQRSIVTFGPVVEKQPDGLITEYPEDSEQQIDMPIMIGYNSCEGMDTTLYYLLEP 178
E QR P ++ G E D E ++ +G+ E T + + P
Sbjct: 124 GELQRLACLPSPEADRNESGGDNEAEHDPE--LEREPCLGFLQRENFSTEIIECISP 178
>At2g18190.1 68415.m02116 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 494
Score = 30.3 bits (65), Expect = 2.4
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Query: 308 TYLKHDNTMSEDRKTQMKIVKLWSNFAKYRNPTPDNDETLAGLRWSPYTVENE---EYLH 364
+YL H SE+ K ++ VKL+S + +D+ +AG W +E+ E L
Sbjct: 158 SYLSHVVAESEETKRDLRAVKLYSRDVR----ASKDDDGMAGAGWGCINLEHPSTFETLA 213
Query: 365 MDNDFKMKTELNKSKFKFWDDFISRWEKKAVNGVI 399
MD K K + +F +F R K G +
Sbjct: 214 MDPGAKKKIIDDMERFLKRREFYKRVGKAWKRGYL 248
>At3g06290.1 68416.m00722 SAC3/GANP family protein contains Pfam
profile: PF03399 SAC3/GANP family
Length = 1720
Score = 28.7 bits (61), Expect = 7.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 354 PYTVENEEYLHMDNDFKMK 372
PY V+N+ +LH D D+K K
Sbjct: 809 PYMVKNDLFLHADKDYKTK 827
>At5g57450.2 68418.m07178 DNA repair family protein contains
similarity to Swiss-Prot:O43542 DNA-repair protein XRCC3
(X-ray repair cross-complementing protein 3) [Homo
sapiens]
Length = 304
Score = 28.3 bits (60), Expect = 9.8
Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 3/113 (2%)
Query: 8 RDLVLGLEWINGNIEKFGGDRERITLMGSQGGAAAVDLLMHSSAKKLFSAVILQGGSSWS 67
R L G E ++G + + G + +T + ++ G L + S I GG + S
Sbjct: 19 RKLTTGCEILDGCL-RGGISCDSLTEIVAESGCGKTQLCLQLSL--CTQLPISHGGLNGS 75
Query: 68 GAYLHDNVRERAFNLGEVMNRTASSGHKLIAKLNEVPPDNIVSKDFHACQKEF 120
YLH L ++ + S + A N+ P D++ ++ H+ F
Sbjct: 76 SLYLHSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHSVDHLF 128
>At5g57450.1 68418.m07177 DNA repair family protein contains
similarity to Swiss-Prot:O43542 DNA-repair protein XRCC3
(X-ray repair cross-complementing protein 3) [Homo
sapiens]
Length = 304
Score = 28.3 bits (60), Expect = 9.8
Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 3/113 (2%)
Query: 8 RDLVLGLEWINGNIEKFGGDRERITLMGSQGGAAAVDLLMHSSAKKLFSAVILQGGSSWS 67
R L G E ++G + + G + +T + ++ G L + S I GG + S
Sbjct: 19 RKLTTGCEILDGCL-RGGISCDSLTEIVAESGCGKTQLCLQLSL--CTQLPISHGGLNGS 75
Query: 68 GAYLHDNVRERAFNLGEVMNRTASSGHKLIAKLNEVPPDNIVSKDFHACQKEF 120
YLH L ++ + S + A N+ P D++ ++ H+ F
Sbjct: 76 SLYLHSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHSVDHLF 128
>At1g30510.3 68414.m03730 ferredoxin--NADP(+) reductase, putative /
adrenodoxin reductase, putative strong similarity to
SP|P41345 Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor (EC 1.18.1.2) (FNR) {Oryza
sativa}, ferredoxin-NADP reductase precursor [Zea mays]
GI:500751
Length = 317
Score = 28.3 bits (60), Expect = 9.8
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 344 DETLAGLRWSPYTVENEEYLHMDNDFKMKTELNKSKFKFWDDFISRWEKKAVNG 397
++T +GL W V N + L D +F + + F+F D +SR EK G
Sbjct: 195 NKTFSGLAWLFLGVANTDSLLYDEEFTKYLKDHPDNFRF-DKALSREEKNKKGG 247
>At1g30510.2 68414.m03732 ferredoxin--NADP(+) reductase, putative /
adrenodoxin reductase, putative strong similarity to
SP|P41345 Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor (EC 1.18.1.2) (FNR) {Oryza
sativa}, ferredoxin-NADP reductase precursor [Zea mays]
GI:500751
Length = 382
Score = 28.3 bits (60), Expect = 9.8
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 344 DETLAGLRWSPYTVENEEYLHMDNDFKMKTELNKSKFKFWDDFISRWEKKAVNG 397
++T +GL W V N + L D +F + + F+F D +SR EK G
Sbjct: 260 NKTFSGLAWLFLGVANTDSLLYDEEFTKYLKDHPDNFRF-DKALSREEKNKKGG 312
>At1g30510.1 68414.m03731 ferredoxin--NADP(+) reductase, putative /
adrenodoxin reductase, putative strong similarity to
SP|P41345 Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor (EC 1.18.1.2) (FNR) {Oryza
sativa}, ferredoxin-NADP reductase precursor [Zea mays]
GI:500751
Length = 381
Score = 28.3 bits (60), Expect = 9.8
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 344 DETLAGLRWSPYTVENEEYLHMDNDFKMKTELNKSKFKFWDDFISRWEKKAVNG 397
++T +GL W V N + L D +F + + F+F D +SR EK G
Sbjct: 259 NKTFSGLAWLFLGVANTDSLLYDEEFTKYLKDHPDNFRF-DKALSREEKNKKGG 311
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.136 0.414
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,852,579
Number of Sequences: 28952
Number of extensions: 495471
Number of successful extensions: 1039
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1034
Number of HSP's gapped (non-prelim): 16
length of query: 409
length of database: 12,070,560
effective HSP length: 83
effective length of query: 326
effective length of database: 9,667,544
effective search space: 3151619344
effective search space used: 3151619344
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
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