Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001963-TA|BGIBMGA001963-PA|IPR000886|Endoplasmic
reticulum targeting sequence, IPR002018|Carboxylesterase, type B
(409 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyce... 38 0.003
SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr 1... 29 1.6
SPBC31F10.10c |||zf-MYND type zinc finger protein|Schizosaccharo... 29 1.6
SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|... 28 2.1
SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyce... 27 3.6
SPAC8F11.08c |||esterase/lipase|Schizosaccharomyces pombe|chr 1|... 27 6.3
SPAC1296.06 |||NADPH cytochrome reductase|Schizosaccharomyces po... 26 8.4
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch... 26 8.4
SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces po... 26 8.4
>SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 520
Score = 37.9 bits (84), Expect = 0.003
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 4 NAGLRDLVLGLEWINGNIEKFGGDRERITLMG-SQGGAAAVDLLM----HSSAKKLFS-A 57
N G D LGLEW +IE FGG++E I + G S G +A+ L+ H A ++ A
Sbjct: 164 NFGFWDQRLGLEWTYKHIESFGGNKENIAVGGISAGSYSALFQLIYETYHPEANQIIKRA 223
Query: 58 VILQGGSS 65
++L G S
Sbjct: 224 LLLSNGLS 231
>SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 28.7 bits (61), Expect = 1.6
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 9 DLVLGLEWINGNIEKFGGDRER-ITLMGSQGGAAAVDLLMH 48
D + +W+ NIEK G + +R L G+ G V +L H
Sbjct: 143 DAIDSFKWVASNIEKLGANPKRGFFLGGASAGGNFVSVLSH 183
>SPBC31F10.10c |||zf-MYND type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 574
Score = 28.7 bits (61), Expect = 1.6
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 303 PNLKETYLKHDNTMSEDRKTQMKIVKLWSNFAKYRNPTPDNDETLAGLRWSPYTVENEEY 362
P + T D E+ I + NF K N P ++ L GL+ YT +N Y
Sbjct: 353 PGVPSTSALLDGRRPENVVDYHGIASFFDNFDKKINKLPREEDILFGLQILAYTSKN--Y 410
Query: 363 LHMDNDFKMKTEL 375
HM F+ ++
Sbjct: 411 FHMRPYFESSKDV 423
>SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 714
Score = 28.3 bits (60), Expect = 2.1
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 314 NTMSEDRKTQMKIVKLWSNFAKYRNPTPDNDETLAGLRWSPYTVENEEYLHMDNDFKMKT 373
N E R+ I++L SN YR+PT D L + + V+N+ H+D K+
Sbjct: 359 NKEEEIRRMTKLILRLESNKKPYRSPTSAADMKLPSVPVA--AVDNKSKTHLDTFEKVVD 416
Query: 374 ELNKSKF 380
+K+ F
Sbjct: 417 LSSKADF 423
>SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 445
Score = 27.5 bits (58), Expect = 3.6
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 209 DAVDEIKSHYFNNKFNKKTIPNFGDYTGDVLTAYSVNCAVSAYAKRSRSPIYYYHFDLFS 268
DAV I H NN FN +I GD + + A+ N A SP Y D +
Sbjct: 240 DAVRSILRHAINNSFNSISID--GDTSTNDTIAFLANGAAGGSEITKSSPAYKEIRDAVT 297
Query: 269 D 269
D
Sbjct: 298 D 298
>SPAC8F11.08c |||esterase/lipase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 376
Score = 26.6 bits (56), Expect = 6.3
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 12 LGLEWINGNIEKFGGDRERITLMGSQGGAA-AVDLLMH---SSAKKLFS 56
L ++WI N + D ERI +G GA+ A++ L H +S K +F+
Sbjct: 242 LCVDWIVENAIYYDADPERIFFLGEDTGASVALESLKHIRPNSVKGIFA 290
>SPAC1296.06 |||NADPH cytochrome reductase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 558
Score = 26.2 bits (55), Expect = 8.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 213 EIKSHYFNNKFNKKTIPNFGDY 234
E+ SH+ NNK +K+ + F Y
Sbjct: 282 EMASHFSNNKMHKERLQEFSSY 303
>SPBP19A11.04c |mor2|cps12|morphogenesis protein
Mor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2196
Score = 26.2 bits (55), Expect = 8.4
Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 2/103 (1%)
Query: 164 SCEGMDTTLYYLLEPRFFSFLHKDFPFILPRRLKFRFDPYKDAFYDAVDEIKSHYFNNKF 223
S G+D +++Y + PRF + FP + + + I+S N F
Sbjct: 760 SNSGVDISIWYNVFPRFIKVCFERFPTTMALLRNTVCEKLPSITMQLLSRIESSELN--F 817
Query: 224 NKKTIPNFGDYTGDVLTAYSVNCAVSAYAKRSRSPIYYYHFDL 266
N K+ ++ +L + + V+ S + Y H DL
Sbjct: 818 NLKSAVKNDNFPEFLLVQWKLYLIVACCTITYTSNVDYSHTDL 860
>SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 949
Score = 26.2 bits (55), Expect = 8.4
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 203 YKDAFYDAVDEIKSHYFNNKFNKKTIPNFGDYTGDVLTAYSVNCAVSAYAKRSRSPIYYY 262
YK A ++A + + YF + +++ D L+A S++ ++S ++RS S +
Sbjct: 447 YKTAVFEAFENLAQQYFTDGVEMRSVRKSSDLRRS-LSAASLS-SLSDSSRRSSSAANPF 504
Query: 263 HFDLFSDFNENKLNIMKMSSVE 284
++F E NI SS+E
Sbjct: 505 QSMSITEFAEMLTNIY-FSSLE 525
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.136 0.414
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,139,633
Number of Sequences: 5004
Number of extensions: 100117
Number of successful extensions: 232
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 229
Number of HSP's gapped (non-prelim): 10
length of query: 409
length of database: 2,362,478
effective HSP length: 74
effective length of query: 335
effective length of database: 1,992,182
effective search space: 667380970
effective search space used: 667380970
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)
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