Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001962-TA|BGIBMGA001962-PA|IPR000387|Tyrosine specific
protein phosphatase and dual specificity protein phosphatase,
IPR000242|Tyrosine specific protein phosphatase, IPR003595|Protein
tyrosine phosphatase, catalytic region
(1140 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0482 - 3791630-3791698,3791983-3792124,3792202-3792344,379... 91 5e-18
11_01_0514 - 3985204-3985266,3985920-3986061,3986144-3986276,398... 53 1e-06
05_03_0475 + 14486969-14487140,14487215-14487338,14487424-144875... 36 0.25
04_04_1060 - 30473509-30473619,30473815-30473850,30474063-304740... 35 0.43
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 35 0.43
05_07_0333 - 29351372-29351665,29351786-29351928,29352374-293524... 33 0.99
02_05_1052 + 33770355-33773981,33774217-33774336,33774880-337749... 33 0.99
07_01_0468 + 3537669-3537890,3539003-3539130,3539398-3539621,353... 33 1.3
11_03_0128 - 10437407-10438049,10438097-10438272 32 2.3
05_01_0538 + 4646772-4647059,4647462-4647542,4647819-4647890,464... 31 4.0
02_05_0785 - 31730300-31730701,31730785-31730856,31730940-317328... 31 5.3
09_06_0092 + 20797122-20797194,20797285-20797975,20799186-20799360 31 7.0
08_02_0830 - 21617485-21618198 31 7.0
05_03_0209 + 10139857-10140041,10140223-10140294,10140374-101404... 31 7.0
12_01_0402 - 3179365-3180343,3180907-3182530,3183357-3183768 30 9.2
09_06_0022 - 20291787-20291864,20291989-20292010,20292269-202932... 30 9.2
>12_01_0482 -
3791630-3791698,3791983-3792124,3792202-3792344,
3792833-3792958,3794307-3794444,3794540-3794622,
3794738-3794825,3796147-3796344
Length = 328
Score = 91.1 bits (216), Expect = 5e-18
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 50 YIVTQGPTEDTVVDFWRMIWQERAAAIVMLTKTFDFIKVMCVQYWPPNKEKDETYGDISV 109
+I TQGP T DFW M+++ + IVMLT+ FD +K C +Y P K++ E YG +V
Sbjct: 133 FISTQGPLAKTFDDFWEMVYEYQCPVIVMLTQ-FDSLK--CDEYLPLRKQR-EAYGKYNV 188
Query: 110 GIVQ-EEELANFFIRTFRLYKTEKGVVIEERFILQFHYTQWHSHTCPFSNALLEFXXXXX 168
I + + ++R + E V R I Y W H P + +
Sbjct: 189 KITNAKRDSHQLWLRDVMVQCNESSRVHSVRHI---EYPDWPDHGVPTNTDAVR------ 239
Query: 169 XXXXXXXXXNPAAGPMVVHCNDGGGRSGVYLAIDANLE--LAEEEDSFDVFGCLKKLRES 226
P P+VVHC+ G GR+G Y+ I + +E L ++ S+ + +K LR
Sbjct: 240 -QIRKWLQNTPMEHPIVVHCSAGIGRTGAYITIHSTIERLLLGDKSSYHLDETVKTLRTQ 298
Query: 227 RKGLIENEEQYKFVYDTLEEHV 248
R G+++ E+QY F Y + + +
Sbjct: 299 RVGMVQTEKQYMFCYRAIADEL 320
Score = 74.1 bits (174), Expect = 6e-13
Identities = 63/238 (26%), Positives = 115/238 (48%), Gaps = 24/238 (10%)
Query: 306 NREKNRDVLVVPPDNFRPYL--TSFQGNSFTDYINAVFVDGYTKPR--EYIATEWPLMMT 361
NREKNR + VVP D R L ++ S DYINA F+ R ++I+T+ PL T
Sbjct: 84 NREKNRYIDVVPFDTTRVRLKRSTTSQTSSNDYINASFIKVTEDNRVAKFISTQGPLAKT 143
Query: 362 QGEFWSLVYDYECAAVVVLCVPPKNSQQYPPFWPEGRHSKKYGPVFTIDHVSHNHYTNIK 421
+FW +VY+Y+C +V+L +S + + P + + YG + + +++ + +
Sbjct: 144 FDDFWEMVYEYQCPVIVML--TQFDSLKCDEYLPLRKQREAYGK-YNV-KITNAKRDSHQ 199
Query: 422 TWIFRINKKIISLTELMAGVKAPTKTVQLFQLTCWPMGHKVPSSTNSLVELMNMVERWRQ 481
W+ + ++ E + +V+ + WP H VP++T++ + + +W Q
Sbjct: 200 LWLRDV---MVQCNE-----SSRVHSVRHIEYPDWP-DHGVPTNTDA----VRQIRKWLQ 246
Query: 482 RTDY-GPVCVVSPDGRSRAGVYCAANACIEQVI--KHGEVDVFQAVKTVRRHRPQLVE 536
T P+ V G R G Y ++ IE+++ + + VKT+R R +V+
Sbjct: 247 NTPMEHPIVVHCSAGIGRTGAYITIHSTIERLLLGDKSSYHLDETVKTLRTQRVGMVQ 304
>11_01_0514 -
3985204-3985266,3985920-3986061,3986144-3986276,
3986703-3986817,3987496-3987549,3987787-3987912,
3989179-3989319,3989470-3989552,3989643-3989733,
3990318-3990405,3992705-3992832
Length = 387
Score = 53.2 bits (122), Expect = 1e-06
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 50 YIVTQGPTEDTVVDFWRMIWQERAAAIVMLTKTFDFIKVMCVQYWPPNKEKDETYGDISV 109
+I TQGP T DFW+M+++ + IVM+TK FD K C +Y P N+ ++ YG SV
Sbjct: 141 FISTQGPLVKTFGDFWQMVYENQCPVIVMVTK-FDGAK--CDRYLPTNEGEERDYGKFSV 197
Query: 110 GIVQ 113
I +
Sbjct: 198 KITK 201
Score = 52.8 bits (121), Expect = 2e-06
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Query: 118 ANFFIRTFRLYKTEKGVVIEERFILQFHYTQWHSHTCPFSNALLEFXXXXXXXXXXXXXX 177
+ + + + L+ +++ R +L Y+ W H P +A +
Sbjct: 256 SKYSVYDYDLFAWFPNSILQVRHVLHILYSDWPDHGVPHDSAFVRKILKRLYGI------ 309
Query: 178 NPAAGPMVVHCNDGGGRSGVYLAIDANLE--LAEEEDSFDVFGCLKKLRESRKGLIENEE 235
P P+V HC+ G GR+G Y+ I +E L + + D+ +KK R R G+++ EE
Sbjct: 310 -PKEHPIVAHCSAGIGRTGAYITIHNTIERILLGDMSALDLSKTVKKFRSQRPGMVQTEE 368
Query: 236 Q 236
Q
Sbjct: 369 Q 369
Score = 52.4 bits (120), Expect = 2e-06
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 276 LNEYQKEYQQICKQTPRFTIGDCAGGHRGDNREKNRDVLVVPPDNFRPYLTSFQGN--SF 333
L Y Q I QT F G NREKNR V+P D R L + S
Sbjct: 64 LTPYNDHIQDI--QTA-FQTGKFTAAQNPANREKNRYSDVMPFDETRVRLKPSASDHPSS 120
Query: 334 TDYINAVFV---DGYTKPREYIATEWPLMMTQGEFWSLVYDYECAAVVVL 380
+YINA + D ++I+T+ PL+ T G+FW +VY+ +C +V++
Sbjct: 121 NEYINASLIETDDQGQSHTKFISTQGPLVKTFGDFWQMVYENQCPVIVMV 170
>05_03_0475 + 14486969-14487140,14487215-14487338,14487424-14487559,
14487663-14488997
Length = 588
Score = 35.5 bits (78), Expect = 0.25
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 7/132 (5%)
Query: 896 RSEATSNRDETPSDATETRNLTLYEEPHSDRTSLCELYDAAFSSQRPSFRRDGSRRHAGV 955
R + S TP+ A + H DRT ++ AA ++ +PS SR
Sbjct: 207 RGSSASTSPRTPATARGAPAGAAWPR-HRDRTQALHVFGAAAAAGQPSASSLVSRSRP-- 263
Query: 956 VDLSALNFRAIDDESPRASRRTSQRSVDETLRQNSETRSWASDSVFTTPERRFPAASSPS 1015
L+A + A+ +P A+ +S RS +Q + TR A +SV + P A+SPS
Sbjct: 264 -SLTAPSSGALQRATPGAAGTSSPRSTAPACQQPAATRRGA-NSVARSGST--PRAASPS 319
Query: 1016 SDGTHLSVTAQA 1027
+S+ A A
Sbjct: 320 PRARDVSIAAGA 331
>04_04_1060 -
30473509-30473619,30473815-30473850,30474063-30474095,
30474246-30474335,30474466-30475215
Length = 339
Score = 34.7 bits (76), Expect = 0.43
Identities = 49/181 (27%), Positives = 71/181 (39%), Gaps = 19/181 (10%)
Query: 813 RHERT-CCRRTPCSSQPALGRRHMCHAARSDRSTDSEDMSPHRAGMRPLPLESDRDGQQS 871
RH+ T CC R CSS+ G+ H A + SE +P R+ + P S R Q S
Sbjct: 30 RHKATNCCTRHGCSSKHLAGKDKQTHRAATAAKEASE--TPRRSQIFRKP--STRTPQGS 85
Query: 872 NCSRSAPLLSPDRFEARFTFDISERSEATSNRD-----ETPSDATETRNLTLYEEPHSDR 926
+ + R A + R T RD + +A+ R+L P S
Sbjct: 86 TATDNI-----SRNAASSYSENDNRPRETPGRDLIARLKERVNASRKRSLNRENSPSSPN 140
Query: 927 TSLCELYDAAFSSQRPSFRRDGSRRHAGV-VDLSALNFRAIDDESPRASRRTSQRSVDET 985
++ + RPS R R A + A+N R +S +RR S R VD+
Sbjct: 141 GLSATSSSSSRTVSRPSHRAASRIRKADEGANAGAVNVRR---DSSGDTRRNSDRDVDDF 197
Query: 986 L 986
L
Sbjct: 198 L 198
>02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 34.7 bits (76), Expect = 0.43
Identities = 61/289 (21%), Positives = 108/289 (37%), Gaps = 19/289 (6%)
Query: 737 GLMDKSKRASSSALYERAPRSPTEAFYNATGSTRLSSQELFEKFCSEDFTSLYGREDD-R 795
G + + SS ++ S +E+ ++ + LS + CS D + L DD R
Sbjct: 213 GKRKRHHKKSSRRRRKKKRYSSSESESSSESESELSDSDSESDTCSSDSSDLSSSSDDRR 272
Query: 796 RKRPPHSK----STGSSGSDVRHERTCCRRTPCSSQPALGRRHMCHAARSDRSTDSEDMS 851
R+R HSK G D R ER +R S Q + + M + + +
Sbjct: 273 RRRKRHSKKDKHKRGKRKRDRRRERKRRKRDRKSKQKS---KRMLESDSETGNVSDSSLE 329
Query: 852 PHRAGMRPLPLESDRDGQQSNCSRSAPLLSPDRFEARFTFDISERSEATSNRDETPSDAT 911
++ +S Q S + +A D A T S + + D++P +
Sbjct: 330 DDKSKRHHRGRKSKASSQVSGENHTALAALKD---AASTQQKSATPRSLAQEDKSPKENG 386
Query: 912 ETR----NLTLYEEPHSDRTSLCELYDAAFSSQRPSFRRDGSRRHAGVVDLSALNFRAID 967
+TR +LTL S + + S +R +R ++ S + +
Sbjct: 387 DTRTNVFHLTLISRSQSMSANHSMSKSMSISPRRSPVKRSAISPKISLISRSP-DVQGHG 445
Query: 968 DESPRASRRTSQRSV--DETLRQNSETRSWASDSVFTTPERRFPAASSP 1014
RA R+ RS ++++ + + RS A S +P R + SP
Sbjct: 446 RSPVRAPERSESRSPPREKSISMSPQRRS-ARRSKSRSPLREKSVSMSP 493
>05_07_0333 - 29351372-29351665,29351786-29351928,29352374-29352434,
29352950-29353034,29353254-29353292,29353487-29353557,
29353640-29353735,29353869-29354017,29354106-29354175,
29354752-29354792,29354902-29354977
Length = 374
Score = 33.5 bits (73), Expect = 0.99
Identities = 37/143 (25%), Positives = 56/143 (39%), Gaps = 9/143 (6%)
Query: 874 SRSAPLLSPDRFEARFTFDISERSEATSNRDETPSDATETRNLTLYEEPHSDRTSLCELY 933
S AP+ + +R A S S+ + R + P A +L + P S +
Sbjct: 217 SAMAPIANNNRLSATEEGRRSGWSDMDAMRRQVPPPAINAGSLAKQKSPIGHEQSTSK-- 274
Query: 934 DAAFSSQRPSFRRDGSRRHAGVVDLSALNFRAIDDESPRASRRTSQRSVDETLRQNSETR 993
DA FSS R GS R V + R E+ ++ RT+ S Q S
Sbjct: 275 DAVFSSSTFLGRSSGSSRRPAVS-----SSREPSTEADQSRSRTTDASPGAF--QRSGAP 327
Query: 994 SWASDSVFTTPERRFPAASSPSS 1016
W+ V ++ RR P+ PS+
Sbjct: 328 RWSPQMVDSSDNRRTPSGRHPSN 350
>02_05_1052 + 33770355-33773981,33774217-33774336,33774880-33774996,
33775322-33775411,33775971-33776078,33776304-33776351
Length = 1369
Score = 33.5 bits (73), Expect = 0.99
Identities = 53/211 (25%), Positives = 77/211 (36%), Gaps = 11/211 (5%)
Query: 794 DRRKRPPHSKSTGSSGSDVRHERTCCRRTPCSSQPALGRRHMCHAARSDRSTDSEDMSPH 853
D+ RP S S+ G T + T + + R +A S + ++
Sbjct: 477 DKDSRPSTSSSSAQRGISPLRRLTISKGTDFTDK---SYRPSTSSAASRGVSPRTRLASD 533
Query: 854 RAG--MRPLPLESDRDGQQSNCSRSAPLLSPDRFEARFTFD-ISERSEATSNRDET-PSD 909
AG ++ + L +DRD + S S S +SP R R D IS+ T D T PS
Sbjct: 534 SAGNILKSMDL-ADRDNKPSTSSASLRGMSPRR---RLASDGISKNITFTEKDDRTMPSS 589
Query: 910 ATETRNLTLYEEPHSDRTSLCELYDAAFSSQRPSFRRDGSRRHAGVVDLSALNFRAIDDE 969
T+ P S+ + D RP+ SR + L++ AI
Sbjct: 590 VASQEISTIRRLPSDGADSISKNIDLPEKVTRPATSSAASRGLSPRRRLASDGVNAISKS 649
Query: 970 SPRASRRTSQRSVDETLRQNSETRSWASDSV 1000
A + T LR S R ASD V
Sbjct: 650 IDLADKDTGPARSTAALRGVSPRRQLASDRV 680
>07_01_0468 +
3537669-3537890,3539003-3539130,3539398-3539621,
3539660-3540062,3540398-3540473
Length = 350
Score = 33.1 bits (72), Expect = 1.3
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 674 DEDDYEPEFVDSPTYLCDRPTPELPPRAGSSDRVLEPRDAPRGPSRAHSQGVFERRLPK 732
D DD+ PEF+ ++ D P PP + ++ PR P P H V +RR P+
Sbjct: 2 DSDDHPPEFI---IHVVDDLAPPPPPPPRAQPALVPPRILPLPPPAFHGAAV-QRRRPR 56
>11_03_0128 - 10437407-10438049,10438097-10438272
Length = 272
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 790 GREDDRRKRPPHSKSTGSSGSDVRHERTCCRRTPCSSQP 828
G +R P S+ST S+ S RTCCR TP S+ P
Sbjct: 120 GHRARQRHLPRRSRSTASTSSTTC--RTCCRATPNSTSP 156
>05_01_0538 +
4646772-4647059,4647462-4647542,4647819-4647890,
4648458-4649321
Length = 434
Score = 31.5 bits (68), Expect = 4.0
Identities = 54/203 (26%), Positives = 75/203 (36%), Gaps = 22/203 (10%)
Query: 789 YGREDDRRKRPPHSKSTGSSGSDVRHERTCCRRTPCSSQPALGRRHMCHAARSDRSTDSE 848
+G ED R RPP K++ S R R S P RR + H S+ S
Sbjct: 188 HGSEDTAR-RPPSVKASLSVSFGQRAPHRASTR---ESSPV--RRTVTHDGHRKSSSPSR 241
Query: 849 DMSPHRAGMRPLPLESDRD-GQQSNCSRSAPLLSPDRFEARFTFDIS------ERSEATS 901
R+G R +P DRD + SR S DR + D +R S
Sbjct: 242 -----RSGSREVP---DRDRSSRDRSSRDYDRSSHDRDRDHSSRDYDRPSHDRDRDRDRS 293
Query: 902 NRDETPSDATETRNLTLYEEPHSDRTSLCELYDAAFSSQRPSFRRDGSRRHAGVVDLSAL 961
+RD S + + + DR S Y + SS+R RRD R S+
Sbjct: 294 SRDYDRSSRDRDHDRDIRDYHRRDRDSRDRDYRSRHSSERQDDRRDRD-REGSRHRRSSS 352
Query: 962 NFRAIDDESPRASRRTSQRSVDE 984
R+ R+ R+ RS +E
Sbjct: 353 RHRSRSRSRSRSRSRSRSRSRNE 375
>02_05_0785 -
31730300-31730701,31730785-31730856,31730940-31732864,
31733000-31733150,31733944-31734009,31734247-31734645
Length = 1004
Score = 31.1 bits (67), Expect = 5.3
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Query: 799 PPHSKSTGSSGSDVRH-ERTCCRRTPCSSQPALGRRHMCHAARSDRSTDSEDMSPHRAGM 857
PP + G+ D ER RR P ++ A ++ AA RS S M P
Sbjct: 16 PPQLPAPGAVTEDAAEKERRRRRRAPRRTKQAAAQQEEPAAAAGPRSCRS--MPPMHVSA 73
Query: 858 RPLPLESDRDGQQSNCSRSAPLL-SPDRFEA 887
PL E+ + + + SRS PLL +P EA
Sbjct: 74 -PLDAEAVEEEEAAGTSRSCPLLPTPSPVEA 103
>09_06_0092 + 20797122-20797194,20797285-20797975,20799186-20799360
Length = 312
Score = 30.7 bits (66), Expect = 7.0
Identities = 16/53 (30%), Positives = 19/53 (35%)
Query: 296 GDCAGGHRGDNREKNRDVLVVPPDNFRPYLTSFQGNSFTDYINAVFVDGYTKP 348
G CA G G + R PP + G DY + VDGY P
Sbjct: 96 GTCATGDCGSGEVECRGAGATPPATLVEFTLGSGGGGGKDYYDVSLVDGYNLP 148
>08_02_0830 - 21617485-21618198
Length = 237
Score = 30.7 bits (66), Expect = 7.0
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 457 PMGHKVPSSTNSLVELMNMVERWRQRTDYGPVCVVSPDGRSRAGVYCAANAC 508
P + P +++ + VERW R + G S S +G+ C A++C
Sbjct: 43 PASFRAPPASDPKPGRADAVERWDARKEAGSSAASSSSSSSSSGLPCRADSC 94
>05_03_0209 +
10139857-10140041,10140223-10140294,10140374-10140445,
10141095-10141166,10141427-10141498,10141628-10141663,
10141958-10142029,10142107-10142181,10142449-10142514,
10142610-10142675,10142748-10142792,10142882-10142946,
10143066-10143445,10143530-10143728,10143801-10143959,
10144042-10144160,10144294-10144504,10145336-10145567,
10145650-10145800,10145899-10146162
Length = 870
Score = 30.7 bits (66), Expect = 7.0
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Query: 728 RRLPKIYKFGL---MDKSKRASSSALYERAPRSPTEAFYNATGSTRLSSQELFEKFCSED 784
R PK Y F + + S R S +YE P + A Y TG TR + F ED
Sbjct: 295 RGSPKYYSFAVDCGSNGSTRGSDDTIYEADPTNLGAATYYVTGQTRWGVSSVGNYFQRED 354
>12_01_0402 - 3179365-3180343,3180907-3182530,3183357-3183768
Length = 1004
Score = 30.3 bits (65), Expect = 9.2
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 435 TELMAGVKAPTKTV-QLFQLTCWPMGHKVPSSTNSLVELMNMVERWRQRTD--YGPVCVV 491
+EL++ K + V QL +L CWP+ + LV ++ ++W + T Y P +
Sbjct: 670 SELVSKAKTREELVHQLHKLDCWPLKGLAEKDLHQLVNILVSEKKWVEETPSRYFPFRLT 729
Query: 492 SPDGRS 497
P R+
Sbjct: 730 LPHKRT 735
>09_06_0022 -
20291787-20291864,20291989-20292010,20292269-20293218,
20293339-20293629
Length = 446
Score = 30.3 bits (65), Expect = 9.2
Identities = 17/37 (45%), Positives = 19/37 (51%)
Query: 667 GPSTEAPDEDDYEPEFVDSPTYLCDRPTPELPPRAGS 703
G STEA E P + +P Y RPT P RAGS
Sbjct: 370 GSSTEASPESHPWPIYRPTPMYHAVRPTCNGPDRAGS 406
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.132 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,376,169
Number of Sequences: 37544
Number of extensions: 1454989
Number of successful extensions: 3737
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 3721
Number of HSP's gapped (non-prelim): 22
length of query: 1140
length of database: 14,793,348
effective HSP length: 90
effective length of query: 1050
effective length of database: 11,414,388
effective search space: 11985107400
effective search space used: 11985107400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 65 (30.3 bits)
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