GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001962-TA|BGIBMGA001962-PA|IPR000387|Tyrosine specific
protein phosphatase and dual specificity protein phosphatase,
IPR000242|Tyrosine specific protein phosphatase, IPR003595|Protein
tyrosine phosphatase, catalytic region
         (1140 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    26   1.3  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    26   1.7  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    24   6.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   9.0  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   9.0  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   9.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   9.0  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 12/26 (46%), Positives = 13/26 (50%)

Query: 554 AALPTTPEETSPSAAPRDHKRPQRPR 579
           AA P  PEE + S  P D   P  PR
Sbjct: 42  AASPAPPEEEAASPTPGDVPTPSSPR 67


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 7/81 (8%)

Query: 692 RPTPELPPRAGSSDRVLEPRDAPRGPSRAHSQGVFERRLPKIYKFGLMDKSKRASSSALY 751
           +PTP +P +  + +R+L P      P       ++  R+P   +  ++      SSS   
Sbjct: 238 KPTPLVPQQGFNMERLLAPSTEVSAPFFRQPLDLYNFRVP---QHQVLQSPSSTSSSP-- 292

Query: 752 ERAPRSPTEAFYNATGSTRLS 772
              PRSP   F   T  +R S
Sbjct: 293 --EPRSPESLFKPVTVISRQS 311


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query: 990  SETRSWASDSVFTTPERRFPAASS 1013
            ++   WA  +VFT PE +F A ++
Sbjct: 157  AQALGWAPTNVFTFPETQFIAVTA 180


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 4/56 (7%)

Query: 79   LTKTFDFIKVMCVQYWPPNKEKDETYGDISVGIVQEEELANFFIRTFRL-YKTEKG 133
            L+K  D+I VMC  Y   + + D+  G ++      E+    F   F + Y  EKG
Sbjct: 2003 LSKYLDWIAVMCYDY---HGQWDKITGHVAPMYAHPEDADATFNTNFTIHYWIEKG 2055


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 417 YTNIKTWIFRINKKIISLTELMAGVKAPTKTVQLF-QLTCWP 457
           YT +K  +    + ++SL  + A + +  +TV +F  +  WP
Sbjct: 161 YTQLKACLMEEKRPMVSLQVIKAQIYSLRETVDVFNDIFGWP 202


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 417 YTNIKTWIFRINKKIISLTELMAGVKAPTKTVQLF-QLTCWP 457
           YT +K  +    + ++SL  + A + +  +TV +F  +  WP
Sbjct: 161 YTQLKACLMEEKRPMVSLQVIKAQIYSLRETVDVFNDIFGWP 202


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 417 YTNIKTWIFRINKKIISLTELMAGVKAPTKTVQLF-QLTCWP 457
           YT +K  +    + ++SL  + A + +  +TV +F  +  WP
Sbjct: 481 YTQLKACLMEEKRPMVSLQVIKAQIYSLRETVDVFNDIFGWP 522


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.132    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 250,367
Number of Sequences: 317
Number of extensions: 10741
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 19
Number of HSP's gapped (non-prelim): 7
length of query: 1140
length of database: 114,650
effective HSP length: 64
effective length of query: 1076
effective length of database: 94,362
effective search space: 101533512
effective search space used: 101533512
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 48 (23.4 bits)