Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001961-TA|BGIBMGA001961-PA|undefined
(114 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0) 34 0.024
SB_16859| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.91
SB_1925| Best HMM Match : Tctex-1 (HMM E-Value=8.7e-12) 28 2.1
SB_57684| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.8
SB_540| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.8
SB_59247| Best HMM Match : Synaphin (HMM E-Value=0.00036) 27 2.8
SB_49613| Best HMM Match : Transposase_5 (HMM E-Value=0.033) 27 3.7
SB_8966| Best HMM Match : SAP (HMM E-Value=1.6e-08) 27 3.7
SB_38786| Best HMM Match : HLH (HMM E-Value=1e-13) 27 4.9
SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026) 26 6.4
SB_24089| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.4
SB_15120| Best HMM Match : Arm (HMM E-Value=0.14) 26 6.4
SB_5549| Best HMM Match : PT (HMM E-Value=1.9) 26 6.4
SB_4342| Best HMM Match : KA1 (HMM E-Value=0.53) 26 6.4
SB_41509| Best HMM Match : Exo_endo_phos (HMM E-Value=4.7e-05) 26 8.5
SB_41055| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.5
SB_21667| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.5
SB_5496| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.5
SB_20304| Best HMM Match : Vicilin_N (HMM E-Value=4.6) 26 8.5
SB_18296| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.5
SB_5821| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.5
>SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1918
Score = 34.3 bits (75), Expect = 0.024
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 3 SRTGPRGTSVATSQRKHRSKSSTRYDMEKKPKKKDMRTSGTTSLVSIPNS 52
SR+ R +S +T +K + KSS+ +KKP +D R S +S S +S
Sbjct: 1851 SRSNSRCSSKSTESKKSKGKSSSAGSQQKKPSVRDSRPSERSSRASSRSS 1900
>SB_16859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 29.1 bits (62), Expect = 0.91
Identities = 28/103 (27%), Positives = 40/103 (38%), Gaps = 10/103 (9%)
Query: 3 SRTGPRGTSVATSQRKHRSKSSTRYDMEKKPKKKDMRTSGTTSLVSIPNSIKLTMLNSGL 62
S GP T+ S K ++ + PKK SL +SIK +N G
Sbjct: 37 SHNGPTKTTSTKSNNKPLKLDKSKRGKTRTPKKS--------SLAGSSSSIK-NFINGGS 87
Query: 63 ISFETFQIVPLYLQNLENVISPSIGAV-DSLVVRIRQCYKRRS 104
+ TF L L++ P G V S+V + QC + S
Sbjct: 88 KTSRTFNGSSLELKHCPKCQVPQAGLVTQSIVDHVMQCLEEES 130
>SB_1925| Best HMM Match : Tctex-1 (HMM E-Value=8.7e-12)
Length = 349
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 30 EKKPKKKDMRTSGTTSLVSIPNSIKLTMLNSGLISF 65
EKKP + M TS IP + L + +GLIS+
Sbjct: 75 EKKPTNRRMATSLLHQATKIPTYLDLLRILNGLISY 110
>SB_57684| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 571
Score = 27.5 bits (58), Expect = 2.8
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Query: 8 RGTSVATSQRKHRSKSSTRYDMEKKPKKKDMRTSG--TTSLVSIPNSIKLTMLNSGLI-S 64
RGTS + K R K RYD ++ ++ R G +T L+S S+ + G+ S
Sbjct: 221 RGTSRSLGLTKTRGKILERYDKKQSHWRQSRRREGARSTRLLSKMGSLGQCLSERGVTPS 280
Query: 65 FETFQIVPLYLQNLENVISPSIGAVDSL 92
T L +E + + AVD+L
Sbjct: 281 LATTGCTKEDLFEMEKKLEIKLVAVDAL 308
>SB_540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 7 PRGTSVATSQRKHRSKSSTRYDMEKKPKKKD 37
P S + +++H S S++ D EK+PK K+
Sbjct: 59 PTPDSGKSKKKRHHSPSASESDSEKRPKGKE 89
>SB_59247| Best HMM Match : Synaphin (HMM E-Value=0.00036)
Length = 217
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 18 KHRSKSSTRYDMEKKPKKKDMRTSGTTSLVSI 49
KHR K +Y +EK + + M T ++SI
Sbjct: 65 KHREKILNKYGIEKSKRHEPMETHSAAKMLSI 96
>SB_49613| Best HMM Match : Transposase_5 (HMM E-Value=0.033)
Length = 999
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 4 RTGPRGTSVATSQRKHRSKSSTRYDMEKKPKKK 36
+TG T QRK SK T+Y + P K
Sbjct: 878 KTGGEPTGYTVGQRKSSSKELTKYKSNRTPSMK 910
>SB_8966| Best HMM Match : SAP (HMM E-Value=1.6e-08)
Length = 696
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 2 SSRTGPRGTSVATSQRKHRSKSSTRYDMEKKPKKKDMRTSGT-TSLVSIPN 51
+S G + +K RSK+S R +P + D GT TS+ S N
Sbjct: 287 NSNIGKQSADGTGKSKKSRSKASKRRSANTQPARSDSAGEGTPTSIGSCEN 337
>SB_38786| Best HMM Match : HLH (HMM E-Value=1e-13)
Length = 817
Score = 26.6 bits (56), Expect = 4.9
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 16 QRKHRSKSSTRYDMEKKPKK--KDMRTSGTTSLVSIPN--SIKLTMLNSGLISFETFQIV 71
Q K + ++ TRY + ++ K+ K+ + +TS +S+PN +I+ T N+G S T +
Sbjct: 174 QVKTKLENPTRYYVAQQQKRQVKEYLKNSSTSTMSLPNHFTIEPTATNTGPSSQPTLNAI 233
>SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026)
Length = 3342
Score = 26.2 bits (55), Expect = 6.4
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 1 MSSRTGPRGTSVATSQRKHRSKSST-RYDMEKKPKKKDMRTSGTTSLVSIPNSIKLT 56
+ S +G TSVA+ R S SST + K+ R + TS I +IK T
Sbjct: 3076 IKSESGIPSTSVASVSRSSISSSSTISSNTSSTTKRSSTRITAITSSALIITTIKAT 3132
>SB_24089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 693
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 34 KKKDMRTSGTTSLVSIPNSIKLTMLNS 60
+ KD++TS T +V PN K +++NS
Sbjct: 448 RNKDIKTSITVGVVGFPNVGKSSIINS 474
>SB_15120| Best HMM Match : Arm (HMM E-Value=0.14)
Length = 626
Score = 26.2 bits (55), Expect = 6.4
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 9 GTSVATSQRKHRSKSSTRYDMEKKPKKKDMRTSGTTSLVSIPNSIKLTMLNSGLISFETF 68
G+ + + K SSTR +++ K + + TSL+++ + K + L GL+
Sbjct: 306 GSQLCSCLMKALDDSSTRPSKKEELVTKHAKIA-LTSLLAVSQTSKASALKDGLVETTLD 364
Query: 69 QIVPLYLQ-NLENV 81
QI +++Q N++++
Sbjct: 365 QIKHIHVQLNMDSL 378
>SB_5549| Best HMM Match : PT (HMM E-Value=1.9)
Length = 282
Score = 26.2 bits (55), Expect = 6.4
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 2 SSRTGPRGTSVATSQRKHRSKS--STRYDMEKKPKKKDMRTSGTTSLVSIPNSIKLTMLN 59
+SR TS+ TS + R KS +T K +K ++TS TSL + + + T L
Sbjct: 15 TSRKTSSKTSLKTSPKTRRKKSPKTTPKTSLKTSRKTSLKTSRKTSLNASRKTSRKTSLK 74
Query: 60 SGL 62
L
Sbjct: 75 RSL 77
>SB_4342| Best HMM Match : KA1 (HMM E-Value=0.53)
Length = 327
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/20 (60%), Positives = 14/20 (70%)
Query: 18 KHRSKSSTRYDMEKKPKKKD 37
K RSKSS D E+KPK+ D
Sbjct: 241 KERSKSSQDKDPEEKPKEDD 260
>SB_41509| Best HMM Match : Exo_endo_phos (HMM E-Value=4.7e-05)
Length = 670
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 2 SSRTGPRGTSVATSQRKHRSKSSTRYDMEKKPKKKDMRTSGT-TSLVSIPN 51
+S G + +K RSK+S R +P + D GT TS+ S N
Sbjct: 149 NSNIGKQSADGTGKSKKSRSKASKRRSANTQPARSDSAGEGTPTSIGSGEN 199
>SB_41055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 10 TSVATSQRKHRSKSSTRYDMEKKPKKKDMRTSGTTSLVS 48
TSV TS RK + + + KP KK T +V+
Sbjct: 22 TSVLTSSRKDNNTTQSNMSTAAKPAKKPAEHPNYTEMVA 60
>SB_21667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 812
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 14 TSQRKHRSKSSTRYDMEKKPKKKDMRTSGTTSLVSIPNSIKLTMLNSGLISFETFQ 69
++Q +SK E+ +++ M TS V+ S++ ++NSGLI T +
Sbjct: 37 SAQAMEKSKEMLIQQKEQLKREEVMATSDFIGTVAFCESLEEAVVNSGLIFEATIE 92
>SB_5496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1352
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 16 QRKHRSKSSTRYDMEKKPKKKDMRTSGTTSLVSIPNSIKLTMLNSGLISFETFQI 70
Q KH + R E++ K+K + TS ++PN+ + ++ + F+TF +
Sbjct: 473 QLKHVRRRRRR---EERLKRKKVEGDRNTSSFNLPNTQNQSSIDDSPVPFDTFAL 524
>SB_20304| Best HMM Match : Vicilin_N (HMM E-Value=4.6)
Length = 261
Score = 25.8 bits (54), Expect = 8.5
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 2 SSRTGPRGTSVATSQRKHRSKSSTRYDMEKKPKKKDMRTSGTTSLVSIPNSIKLTMLNS 60
S +T P+ TS T RK K+ST+ + PK + T+ S+ S+K T N+
Sbjct: 41 SPKTSPK-TSPKTG-RKTSWKTSTKTGRKTSPKTSLNASRKTSGKTSLKRSLKTTRNNA 97
>SB_18296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 8 RGTSVATSQRKHRSKSSTRYDMEKKPKKKDMRTS 41
R TS+A +R RS S+ ++ K K +DM +S
Sbjct: 71 RNTSIAKDERSARSSRSSLKIIKIKRKPQDMESS 104
>SB_5821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 562
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/46 (32%), Positives = 19/46 (41%)
Query: 7 PRGTSVATSQRKHRSKSSTRYDMEKKPKKKDMRTSGTTSLVSIPNS 52
P GT + Q R + R+D E+ P S SL S P S
Sbjct: 321 PPGTPASERQAVERLRQQLRFDEEQVPTSDHSGASAQESLPSPPVS 366
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.130 0.350
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,306,523
Number of Sequences: 59808
Number of extensions: 105287
Number of successful extensions: 483
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 471
Number of HSP's gapped (non-prelim): 22
length of query: 114
length of database: 16,821,457
effective HSP length: 73
effective length of query: 41
effective length of database: 12,455,473
effective search space: 510674393
effective search space used: 510674393
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 54 (25.8 bits)
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