GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001960-TA|BGIBMGA001960-PA|IPR012462|Protein of unknown
function DUF1671
         (212 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding pr...    23   9.0  
AY146721-1|AAO12081.1|  144|Anopheles gambiae odorant-binding pr...    23   9.0  
AF437884-1|AAL84179.1|  144|Anopheles gambiae odorant binding pr...    23   9.0  

>AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding
           protein AgamOBP17 protein.
          Length = 155

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 9/25 (36%), Positives = 16/25 (64%)

Query: 180 LQDHGWVKWQPLHDFLSSSFYNLCL 204
           + D+G V  + LHD L SS +++ +
Sbjct: 84  VDDNGDVHLEKLHDSLPSSMHDIAM 108


>AY146721-1|AAO12081.1|  144|Anopheles gambiae odorant-binding
           protein AgamOBP1 protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 9/25 (36%), Positives = 16/25 (64%)

Query: 180 LQDHGWVKWQPLHDFLSSSFYNLCL 204
           + D+G V  + LHD L SS +++ +
Sbjct: 84  VDDNGDVHLEKLHDSLPSSMHDIAM 108


>AF437884-1|AAL84179.1|  144|Anopheles gambiae odorant binding
           protein protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 9/25 (36%), Positives = 16/25 (64%)

Query: 180 LQDHGWVKWQPLHDFLSSSFYNLCL 204
           + D+G V  + LHD L SS +++ +
Sbjct: 84  VDDNGDVHLEKLHDSLPSSMHDIAM 108


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.141    0.454 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,962
Number of Sequences: 2123
Number of extensions: 10173
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 3
length of query: 212
length of database: 516,269
effective HSP length: 61
effective length of query: 151
effective length of database: 386,766
effective search space: 58401666
effective search space used: 58401666
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 46 (22.6 bits)