BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001960-TA|BGIBMGA001960-PA|IPR012462|Protein of unknown
function DUF1671
(212 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022279-1|AAY54695.1| 234|Drosophila melanogaster IP08168p pro... 173 1e-43
AE013599-266|AAM70838.1| 234|Drosophila melanogaster CG30157-PA... 173 1e-43
BT001409-1|AAN71164.1| 607|Drosophila melanogaster GH10640p pro... 169 2e-42
AE014296-2537|AAF49615.1| 607|Drosophila melanogaster CG16979-P... 169 2e-42
L23146-1|AAA03750.1| 1011|Drosophila melanogaster neuromusculin ... 28 8.3
AF145668-1|AAD38643.1| 778|Drosophila melanogaster BcDNA.GH1167... 28 8.3
AE014297-3753|AAF56434.2| 778|Drosophila melanogaster CG10506-P... 28 8.3
AE014296-3753|ABI31268.1| 1036|Drosophila melanogaster CG8779-PB... 28 8.3
AE014296-3752|AAF51887.4| 1087|Drosophila melanogaster CG8779-PA... 28 8.3
>BT022279-1|AAY54695.1| 234|Drosophila melanogaster IP08168p
protein.
Length = 234
Score = 173 bits (422), Expect = 1e-43
Identities = 89/189 (47%), Positives = 114/189 (60%), Gaps = 4/189 (2%)
Query: 18 GKSYLIKGNYEYYHYLCDGFDDRGWGCGYRTLQTICSWMKLNHMDVA-VPSIREIQSILV 76
G++ + +G + Y+HY CDG D GWGCGYRTLQ+ SW++ VPSIREIQ ILV
Sbjct: 44 GRTLVTRGGFNYFHYGCDGHQDAGWGCGYRTLQSAISWIQRRQGSSGHVPSIREIQQILV 103
Query: 77 DLEDKPKTFIGSRQWIGSFEVCLVIDKLFDVPCKIIHINKGDDLKTIVDALVKHFIEYSS 136
+ DK F+GSR WIG+ E VID L VPCKI+H K I+ L +F +Y
Sbjct: 104 AIGDKGPEFVGSRDWIGTLEEFYVIDVLHQVPCKILHA-KELSSDEILGELRSYFEKYQG 162
Query: 137 PVMMGGDVDCSSKGIMGIHIGDHGASLL-VVDPHYVGKQPRKNYLQDHGWVKWQPLHDFL 195
V MGG D +SK I G H G L VVDPH+VG + +L D G+V+W P+ +F
Sbjct: 163 FVAMGGLSDTASKAITGYHCSARGRIFLQVVDPHFVGVPSSRQHLIDLGYVRWVPVDEFA 222
Query: 196 SSSFYNLCL 204
S+ YNLCL
Sbjct: 223 GST-YNLCL 230
>AE013599-266|AAM70838.1| 234|Drosophila melanogaster CG30157-PA
protein.
Length = 234
Score = 173 bits (422), Expect = 1e-43
Identities = 89/189 (47%), Positives = 114/189 (60%), Gaps = 4/189 (2%)
Query: 18 GKSYLIKGNYEYYHYLCDGFDDRGWGCGYRTLQTICSWMKLNHMDVA-VPSIREIQSILV 76
G++ + +G + Y+HY CDG D GWGCGYRTLQ+ SW++ VPSIREIQ ILV
Sbjct: 44 GRTLVTRGGFNYFHYGCDGHQDAGWGCGYRTLQSAISWIQRRQGSSGHVPSIREIQQILV 103
Query: 77 DLEDKPKTFIGSRQWIGSFEVCLVIDKLFDVPCKIIHINKGDDLKTIVDALVKHFIEYSS 136
+ DK F+GSR WIG+ E VID L VPCKI+H K I+ L +F +Y
Sbjct: 104 AIGDKGPEFVGSRDWIGTLEEFYVIDVLHQVPCKILHA-KELSSDEILGELRSYFEKYQG 162
Query: 137 PVMMGGDVDCSSKGIMGIHIGDHGASLL-VVDPHYVGKQPRKNYLQDHGWVKWQPLHDFL 195
V MGG D +SK I G H G L VVDPH+VG + +L D G+V+W P+ +F
Sbjct: 163 FVAMGGLSDTASKAITGYHCSARGRIFLQVVDPHFVGVPSSRQHLIDLGYVRWVPVDEFA 222
Query: 196 SSSFYNLCL 204
S+ YNLCL
Sbjct: 223 GST-YNLCL 230
>BT001409-1|AAN71164.1| 607|Drosophila melanogaster GH10640p
protein.
Length = 607
Score = 169 bits (411), Expect = 2e-42
Identities = 79/192 (41%), Positives = 110/192 (57%), Gaps = 6/192 (3%)
Query: 18 GKSYLIKGNYEYYHYLCDGFDDRGWGCGYRTLQTICSWMKLN-HMDVAVPSIREIQSILV 76
GK YL+ GNY YYHYL D+GWGC YR+LQTICSW L + + +P+ E+Q L
Sbjct: 414 GKEYLVNGNYHYYHYLQQQVQDKGWGCAYRSLQTICSWFVLQGYTNAPIPTHLEVQEYLH 473
Query: 77 DLEDKPKTFIGSRQWIGSFEVCLVIDKLFDVPCKIIHINKGDDLKTIVDALVKHFIEYSS 136
+ DKP F+GS QWIGS E+ + + +V KI+H+ G +L TI L HF +
Sbjct: 474 KINDKPAAFVGSSQWIGSTEISMCLQGFLNVDSKILHVASGAELATIASELAMHFQTQGT 533
Query: 137 PVMMGGDVDCSSKGIMGIH--IGDHGASLLVVDPHYVGKQPRKNYLQDHGWVKWQPLHDF 194
PVM+GG V + I+G+ + L++DPHY G +Q GW W+ + +
Sbjct: 534 PVMIGGGV--LAHTIIGVDYCVQTGQVKFLILDPHYTGADDLAT-IQIKGWCGWKGMDFW 590
Query: 195 LSSSFYNLCLPQ 206
S+YNLC+PQ
Sbjct: 591 AKGSYYNLCMPQ 602
>AE014296-2537|AAF49615.1| 607|Drosophila melanogaster CG16979-PA
protein.
Length = 607
Score = 169 bits (411), Expect = 2e-42
Identities = 79/192 (41%), Positives = 110/192 (57%), Gaps = 6/192 (3%)
Query: 18 GKSYLIKGNYEYYHYLCDGFDDRGWGCGYRTLQTICSWMKLN-HMDVAVPSIREIQSILV 76
GK YL+ GNY YYHYL D+GWGC YR+LQTICSW L + + +P+ E+Q L
Sbjct: 414 GKEYLVNGNYHYYHYLQQQVQDKGWGCAYRSLQTICSWFVLQGYTNAPIPTHLEVQEYLH 473
Query: 77 DLEDKPKTFIGSRQWIGSFEVCLVIDKLFDVPCKIIHINKGDDLKTIVDALVKHFIEYSS 136
+ DKP F+GS QWIGS E+ + + +V KI+H+ G +L TI L HF +
Sbjct: 474 KINDKPAAFVGSSQWIGSTEISMCLQGFLNVDSKILHVASGAELATIASELAMHFQTQGT 533
Query: 137 PVMMGGDVDCSSKGIMGIH--IGDHGASLLVVDPHYVGKQPRKNYLQDHGWVKWQPLHDF 194
PVM+GG V + I+G+ + L++DPHY G +Q GW W+ + +
Sbjct: 534 PVMIGGGV--LAHTIIGVDYCVQTGQVKFLILDPHYTGADDLAT-IQIKGWCGWKGMDFW 590
Query: 195 LSSSFYNLCLPQ 206
S+YNLC+PQ
Sbjct: 591 AKGSYYNLCMPQ 602
>L23146-1|AAA03750.1| 1011|Drosophila melanogaster neuromusculin
protein.
Length = 1011
Score = 28.3 bits (60), Expect = 8.3
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 29 YYHYLCDGFDDRGWG 43
+Y+Y C+GF+ GWG
Sbjct: 549 FYNYSCEGFNAAGWG 563
>AF145668-1|AAD38643.1| 778|Drosophila melanogaster BcDNA.GH11673
protein.
Length = 778
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 16 QTGKSYLIKGNYEYYHYLCDGFDD 39
+TG + I Y+Y H LCD +D
Sbjct: 430 RTGSDWCIYPTYDYTHCLCDSLED 453
>AE014297-3753|AAF56434.2| 778|Drosophila melanogaster CG10506-PA
protein.
Length = 778
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 16 QTGKSYLIKGNYEYYHYLCDGFDD 39
+TG + I Y+Y H LCD +D
Sbjct: 430 RTGSDWCIYPTYDYTHCLCDSLED 453
>AE014296-3753|ABI31268.1| 1036|Drosophila melanogaster CG8779-PB,
isoform B protein.
Length = 1036
Score = 28.3 bits (60), Expect = 8.3
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 29 YYHYLCDGFDDRGWG 43
+Y+Y C+GF+ GWG
Sbjct: 552 FYNYSCEGFNAAGWG 566
>AE014296-3752|AAF51887.4| 1087|Drosophila melanogaster CG8779-PA,
isoform A protein.
Length = 1087
Score = 28.3 bits (60), Expect = 8.3
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 29 YYHYLCDGFDDRGWG 43
+Y+Y C+GF+ GWG
Sbjct: 552 FYNYSCEGFNAAGWG 566
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.323 0.141 0.454
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,485,144
Number of Sequences: 52641
Number of extensions: 494582
Number of successful extensions: 695
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 674
Number of HSP's gapped (non-prelim): 9
length of query: 212
length of database: 24,830,863
effective HSP length: 82
effective length of query: 130
effective length of database: 20,514,301
effective search space: 2666859130
effective search space used: 2666859130
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)
- SilkBase 1999-2023 -