Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001957-TA|BGIBMGA001957-PA|IPR001876|Zinc finger,
RanBP2-type
(733 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein. 29 0.15
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 29 0.15
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 29 0.15
X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein. 25 1.4
AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein. 25 1.4
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 24 4.3
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 23 7.5
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 23 7.5
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 23 9.9
>X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein.
Length = 133
Score = 28.7 bits (61), Expect = 0.15
Identities = 12/41 (29%), Positives = 24/41 (58%)
Query: 479 EEMYRTAKVNENLMRMKQEQESKRTKQLAKKQTDERRTRKA 519
+E+ ++NE R ++EQE + +Q K+Q E++T +
Sbjct: 63 KELRAVKEINEQARREREEQERHKQQQQEKQQKIEQQTHSS 103
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 28.7 bits (61), Expect = 0.15
Identities = 12/41 (29%), Positives = 24/41 (58%)
Query: 479 EEMYRTAKVNENLMRMKQEQESKRTKQLAKKQTDERRTRKA 519
+E+ ++NE R ++EQE + +Q K+Q E++T +
Sbjct: 214 KELRAVKEINEQARREREEQERHKQQQQEKQQKIEQQTHSS 254
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 28.7 bits (61), Expect = 0.15
Identities = 12/41 (29%), Positives = 24/41 (58%)
Query: 479 EEMYRTAKVNENLMRMKQEQESKRTKQLAKKQTDERRTRKA 519
+E+ ++NE R ++EQE + +Q K+Q E++T +
Sbjct: 273 KELRAVKEINEQARREREEQERHKQQQQEKQQKIEQQTHSS 313
>X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein.
Length = 251
Score = 25.4 bits (53), Expect = 1.4
Identities = 29/139 (20%), Positives = 48/139 (34%), Gaps = 11/139 (7%)
Query: 308 PYMIPTPVYPPIKHATNV-PINGYPPVAQYKYPAVPTGQLIEIESNYENGKF-------- 358
PYM P + P P + A + QL+E+E + +GK+
Sbjct: 61 PYMSSVLQLPTVTEIQETQPQRTKPTAGKRARTAYTSAQLVELEREFHHGKYLSRPRRIQ 120
Query: 359 --ERYRDEDRHKRRQESSRRNSTSKSGFSDVTLPSLPRSDTQPTLSKAKEDGMGTYESWD 416
E +R + +RR K + V+ P ++T +LS +
Sbjct: 121 IAENLNLSERQIKIWFQNRRMKHKKEQMNKVSTPRSSPAETASSLSPQSVASTASSADHQ 180
Query: 417 YVFRNLSSKDHDESRSRFS 435
V R LS D + +S
Sbjct: 181 IVDRLLSHAPIDSANQWYS 199
>AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein.
Length = 246
Score = 25.4 bits (53), Expect = 1.4
Identities = 29/139 (20%), Positives = 48/139 (34%), Gaps = 11/139 (7%)
Query: 308 PYMIPTPVYPPIKHATNV-PINGYPPVAQYKYPAVPTGQLIEIESNYENGKF-------- 358
PYM P + P P + A + QL+E+E + +GK+
Sbjct: 52 PYMSSVLQLPTVTEIQETQPQRTKPTAGKRARTAYTSAQLVELEREFHHGKYLSRPRRIQ 111
Query: 359 --ERYRDEDRHKRRQESSRRNSTSKSGFSDVTLPSLPRSDTQPTLSKAKEDGMGTYESWD 416
E +R + +RR K + V+ P ++T +LS +
Sbjct: 112 IAENLNLSERQIKIWFQNRRMKHKKEQMNKVSTPRSSPAETASSLSPQSVASTASSADHQ 171
Query: 417 YVFRNLSSKDHDESRSRFS 435
V R LS D + +S
Sbjct: 172 IVDRLLSHAPIDSANQWYS 190
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 23.8 bits (49), Expect = 4.3
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 285 LPQCSTVPMMTPYGVPYYYP 304
+ CS+VP YG Y+P
Sbjct: 102 MTSCSSVPTTASYGSDLYFP 121
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 23.0 bits (47), Expect = 7.5
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 526 PEADALVPNKVAPDKVKLLTKKEIKERKDVIKQ 558
P+ D+LV ++ P +V +++ D IKQ
Sbjct: 271 PKLDSLVSSRAWPSRVANQKLRDLNREVDQIKQ 303
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 23.0 bits (47), Expect = 7.5
Identities = 10/32 (31%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 300 PYYYPVQ-APYMIPTPVYPPIKHATNVPINGY 330
PY Q P P +Y P+ + TN+ Y
Sbjct: 333 PYQISAQPTPSQSPNQIYQPVTNLTNLTYPSY 364
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 22.6 bits (46), Expect = 9.9
Identities = 17/107 (15%), Positives = 43/107 (40%)
Query: 509 KQTDERRTRKATEPIGNPEADALVPNKVAPDKVKLLTKKEIKERKDVIKQQNSANGPVQS 568
+ T ++R + T +V K ++ +L +K +++ + +
Sbjct: 842 RSTPDKREKSPTSDKAQEADGEVVVKKEVDEEERLENHTSVKIKREAEDRDEDERSFHSN 901
Query: 569 TAEVKKVRKPAKLVAQEIEKPKGKTAENGHQNTAHSSKTNASSSPQS 615
A+ + KP+ +P A + +N+A + ++ S +P+S
Sbjct: 902 GAKEEDEDKPSVSPLTSPRQPAETHAGSPCRNSASPASSDRSGTPRS 948
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.314 0.130 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,456
Number of Sequences: 317
Number of extensions: 7942
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 10
length of query: 733
length of database: 114,650
effective HSP length: 62
effective length of query: 671
effective length of database: 94,996
effective search space: 63742316
effective search space used: 63742316
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 46 (22.6 bits)
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